RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 ITPR1Q14643 2758 aa8.21□□□□□ -1.1
CTNNA1-223ENST00000520520 PCNX2A6NKB5 2137 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 PLXNA2O75051 1894 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 A0A1B0GVT2 93 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 SNTNA6NMZ2 147 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 ARHGEF33A8MVX0 844 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 BCAT2O15382 392 aaPredicted RBP8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 GREM1O60565 184 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 SLITRK5O94991 958 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 GADD45GO95257 159 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 CISD3P0C7P0 127 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 TRAPPC2P0DI81 140 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 TRAPPC2BP0DI82 140 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 ARAFP10398 606 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 PABPC1P11940 636 aaKnown RBP8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 IDSP22304 550 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 SOAT1P35610 550 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 LIPAP38571 399 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 NNMTP40261 264 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 CSNK1EP49674 416 aaKnown RBP8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 ANXA11P50995 505 aaKnown RBP8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 TPMTP51580 245 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 CDK6Q00534 326 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 RHAGQ02094 409 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 GAB1Q13480 694 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 NAE1Q13564 534 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 PDE7AQ13946 482 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 ZNF234Q14588 700 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 SYT16Q17RD7 645 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 EXOC3L2Q2M3D2 409 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 HLA-BQ31612 363 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 INAVAQ3KP66 663 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 CRB2Q5IJ48 1285 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 STEAP3Q658P3 488 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 SERPINA13PQ6UXR4 307 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 PTCHD4Q6ZW05 846 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 ZNF551Q7Z340 670 aaPredicted RBP8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 HEATR4Q86WZ0 1026 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 RNF130Q86XS8 419 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 SYTL1Q8IYJ3 562 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 NRSN1Q8IZ57 195 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 SLC5A8Q8N695 610 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 ADAMTS14Q8WXS8 1223 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 HTRA1Q92743 480 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 GGHQ92820 318 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 RPL3LQ92901 407 aaKnown RBP8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 PYCR2Q96C36 320 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 WDR34Q96EX3 536 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 CCDC97Q96F63 343 aaPredicted RBP8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 EGLN2Q96KS0 407 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 QRFPRQ96P65 431 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 TRNT1Q96Q11 434 aaKnown RBP8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 FAM129BQ96TA1 746 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 DPH2Q9BQC3 489 aaPredicted RBP8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 SLC30A2Q9BRI3 323 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 CCM2Q9BSQ5 444 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 MND1Q9BWT6 205 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 NLNQ9BYT8 704 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 PRRG3Q9BZD7 231 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 OR2B2Q9GZK3 357 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 ATG10Q9H0Y0 220 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 TMEM245Q9H330 911 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 SMURF1Q9HCE7 757 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 WSB2Q9NYS7 404 aaPredicted RBP8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 EHD3Q9NZN3 535 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 NDUFAF4Q9P032 175 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 SPATA7Q9P0W8 599 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 ZNF221Q9UK13 617 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 FBXO10Q9UK96 956 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 PCOLCE2Q9UKZ9 415 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 PNMA8BQ9ULN7 279 aaPredicted RBP8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 CLEC4EQ9ULY5 219 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 MGAT4BQ9UQ53 548 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 TRAPPC4Q9Y296 219 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 BTBD3Q9Y2F9 522 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 IFT52Q9Y366 437 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 PCDHGB6Q9Y5F9 930 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 SLCO1B1Q9Y6L6 691 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 SMG1Q96Q15 3661 aaKnown RBP8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 PKD1L2Q7Z442 2459 aa8.2□□□□□ -1.1
CTNNA1-223ENST00000520520 A0A0U1RQS6 177 aa8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 TSPAN11A1L157 253 aa8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 FAM172BPA6NC97 362 aa8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 M0R082 166 aa8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 PSMD11O00231 422 aa8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 FAAHO00519 579 aa8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 MYL12BO14950 172 aa8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 TNFRSF21O75509 655 aa8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 CER1O95813 267 aa8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 CBLP22681 906 aa8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 UQCRC2P22695 453 aa8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 LHCGRP22888 699 aa8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 AQP1P29972 269 aa8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 CD70P32970 193 aa8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 CSTF2P33240 577 aaKnown RBP eCLIP8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 CASP3P42574 277 aa8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 SLC15A1P46059 708 aa8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 XCR1P46094 333 aa8.19□□□□□ -1.1
CTNNA1-223ENST00000520520 PRLHRP49683 370 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms