RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-213	ENST00000519553	PHOX2A	O14813	284 aa		4.64	□□□□□ -1.67
PTPN12-213	ENST00000519553	VEGFD	O43915	354 aa		4.64	□□□□□ -1.67
PTPN12-213	ENST00000519553	MBL2	P11226	248 aa	Predicted RBP	4.64	□□□□□ -1.67
PTPN12-213	ENST00000519553	TRIM23	P36406	574 aa		4.64	□□□□□ -1.67
PTPN12-213	ENST00000519553	PITPNB	P48739	271 aa		4.64	□□□□□ -1.67
PTPN12-213	ENST00000519553	SNX32	Q86XE0	403 aa		4.64	□□□□□ -1.67
PTPN12-213	ENST00000519553	FBXL16	Q8N461	479 aa		4.64	□□□□□ -1.67
PTPN12-213	ENST00000519553	SPC24	Q8NBT2	197 aa		4.64	□□□□□ -1.67
PTPN12-213	ENST00000519553	BEST4	Q8NFU0	473 aa		4.64	□□□□□ -1.67
PTPN12-213	ENST00000519553	DTD2	Q96FN9	168 aa		4.64	□□□□□ -1.67
PTPN12-213	ENST00000519553	ZBP1	Q9H171	429 aa		4.64	□□□□□ -1.67
PTPN12-213	ENST00000519553	COMMD8	Q9NX08	183 aa		4.64	□□□□□ -1.67
PTPN12-213	ENST00000519553	TAS2R16	Q9NYV7	291 aa		4.64	□□□□□ -1.67
PTPN12-213	ENST00000519553	RCOR3	Q9P2K3	495 aa	Predicted RBP	4.64	□□□□□ -1.67
PTPN12-213	ENST00000519553	SLC6A5	Q9Y345	797 aa		4.64	□□□□□ -1.67
PTPN12-213	ENST00000519553	ZNF487	B1APH4	448 aa		4.63	□□□□□ -1.67
PTPN12-213	ENST00000519553	SH2D1B	O14796	132 aa		4.63	□□□□□ -1.67
PTPN12-213	ENST00000519553	OLFM2	O95897	454 aa		4.63	□□□□□ -1.67
PTPN12-213	ENST00000519553	TNFRSF4	P43489	277 aa		4.63	□□□□□ -1.67
PTPN12-213	ENST00000519553	NDST1	P52848	882 aa		4.63	□□□□□ -1.67
PTPN12-213	ENST00000519553	RPS4X	P62701	263 aa	Known RBP	4.63	□□□□□ -1.67
PTPN12-213	ENST00000519553	TRADD	Q15628	312 aa		4.63	□□□□□ -1.67
PTPN12-213	ENST00000519553		Q1RN00	199 aa		4.63	□□□□□ -1.67
PTPN12-213	ENST00000519553	GPAT3	Q53EU6	434 aa		4.63	□□□□□ -1.67
PTPN12-213	ENST00000519553	LINC00242	Q5T6M2	205 aa		4.63	□□□□□ -1.67
PTPN12-213	ENST00000519553	PRAMEF7	Q5VXH5	474 aa		4.63	□□□□□ -1.67
PTPN12-213	ENST00000519553	SERINC5	Q86VE9	423 aa		4.63	□□□□□ -1.67
PTPN12-213	ENST00000519553	LINC00518	Q8N0U6	118 aa		4.63	□□□□□ -1.67
PTPN12-213	ENST00000519553	ZNF713	Q8N859	430 aa	Predicted RBP	4.63	□□□□□ -1.67
PTPN12-213	ENST00000519553	RDH11	Q8TC12	318 aa		4.63	□□□□□ -1.67
PTPN12-213	ENST00000519553	P3H4	Q92791	437 aa		4.63	□□□□□ -1.67
PTPN12-213	ENST00000519553	RAB3C	Q96E17	227 aa		4.63	□□□□□ -1.67
PTPN12-213	ENST00000519553	APOL2	Q9BQE5	337 aa		4.63	□□□□□ -1.67
PTPN12-213	ENST00000519553	AMBN	Q9NP70	447 aa		4.63	□□□□□ -1.67
PTPN12-213	ENST00000519553	TRMT6	Q9UJA5	497 aa	Known RBP	4.63	□□□□□ -1.67
PTPN12-213	ENST00000519553	TP53TG3	Q9ULZ0	132 aa		4.63	□□□□□ -1.67
PTPN12-213	ENST00000519553	FAM205A	Q6ZU69	1335 aa		4.63	□□□□□ -1.67
PTPN12-213	ENST00000519553	TRAV9-2	A0A087WT02	112 aa		4.62	□□□□□ -1.67
PTPN12-213	ENST00000519553		A0A0A6YYD4	124 aa		4.62	□□□□□ -1.67
PTPN12-213	ENST00000519553	PNP	P00491	289 aa		4.62	□□□□□ -1.67
PTPN12-213	ENST00000519553	ABHD2	P08910	425 aa		4.62	□□□□□ -1.67
PTPN12-213	ENST00000519553	ATP6V1B1	P15313	513 aa		4.62	□□□□□ -1.67
PTPN12-213	ENST00000519553	AREG	P15514	252 aa		4.62	□□□□□ -1.67
PTPN12-213	ENST00000519553	NSF	P46459	744 aa	Known RBP	4.62	□□□□□ -1.67
PTPN12-213	ENST00000519553	CNN1	P51911	297 aa	Known RBP	4.62	□□□□□ -1.67
PTPN12-213	ENST00000519553	CDKL1	Q00532	357 aa		4.62	□□□□□ -1.67
PTPN12-213	ENST00000519553	LTB4R	Q15722	352 aa		4.62	□□□□□ -1.67
PTPN12-213	ENST00000519553	HAGH	Q16775	308 aa		4.62	□□□□□ -1.67
PTPN12-213	ENST00000519553	C14orf28	Q4W4Y0	310 aa		4.62	□□□□□ -1.67
PTPN12-213	ENST00000519553	DDI2	Q5TDH0	399 aa		4.62	□□□□□ -1.67
PTPN12-213	ENST00000519553	CCBE1	Q6UXH8	406 aa	Predicted RBP	4.62	□□□□□ -1.67
PTPN12-213	ENST00000519553	MOB2	Q70IA6	237 aa		4.62	□□□□□ -1.67
PTPN12-213	ENST00000519553	HSCB	Q8IWL3	235 aa		4.62	□□□□□ -1.67
PTPN12-213	ENST00000519553	CARD9	Q9H257	536 aa		4.62	□□□□□ -1.67
PTPN12-213	ENST00000519553	ABCC13	Q9NSE7	274 aa		4.62	□□□□□ -1.67
PTPN12-213	ENST00000519553	APPL1	Q9UKG1	709 aa		4.62	□□□□□ -1.67
PTPN12-213	ENST00000519553	RNF24	Q9Y225	148 aa		4.62	□□□□□ -1.67
PTPN12-213	ENST00000519553	NPC1L1	Q9UHC9	1359 aa		4.62	□□□□□ -1.67
PTPN12-213	ENST00000519553	EEF2K	O00418	725 aa	Known RBP	4.61	□□□□□ -1.67
PTPN12-213	ENST00000519553	LRRTM2	O43300	516 aa		4.61	□□□□□ -1.67
PTPN12-213	ENST00000519553	LRP3	O75074	770 aa		4.61	□□□□□ -1.67
PTPN12-213	ENST00000519553	ATP6V1G1	O75348	118 aa		4.61	□□□□□ -1.67
PTPN12-213	ENST00000519553	OAS1	P00973	400 aa	Known RBP	4.61	□□□□□ -1.67
PTPN12-213	ENST00000519553	UCP1	P25874	307 aa		4.61	□□□□□ -1.67
PTPN12-213	ENST00000519553	CALML3	P27482	149 aa		4.61	□□□□□ -1.67
PTPN12-213	ENST00000519553	OAS2	P29728	719 aa	Known RBP	4.61	□□□□□ -1.67
PTPN12-213	ENST00000519553	PPP2R1B	P30154	601 aa		4.61	□□□□□ -1.67
PTPN12-213	ENST00000519553	MAT2A	P31153	395 aa	Known RBP	4.61	□□□□□ -1.67
PTPN12-213	ENST00000519553	ACADSB	P45954	432 aa		4.61	□□□□□ -1.67
PTPN12-213	ENST00000519553	GSTO1	P78417	241 aa		4.61	□□□□□ -1.67
PTPN12-213	ENST00000519553	ARF5	P84085	180 aa		4.61	□□□□□ -1.67
PTPN12-213	ENST00000519553	GALK2	Q01415	458 aa		4.61	□□□□□ -1.67
PTPN12-213	ENST00000519553	PEX6	Q13608	980 aa		4.61	□□□□□ -1.67
PTPN12-213	ENST00000519553	TSTA3	Q13630	321 aa	Predicted RBP	4.61	□□□□□ -1.67
PTPN12-213	ENST00000519553	ABRAXAS2	Q15018	415 aa		4.61	□□□□□ -1.67
PTPN12-213	ENST00000519553	FAM219B	Q5XKK7	198 aa		4.61	□□□□□ -1.67
PTPN12-213	ENST00000519553	ABRAXAS1	Q6UWZ7	409 aa		4.61	□□□□□ -1.67
PTPN12-213	ENST00000519553	BAIAP2L2	Q6UXY1	529 aa		4.61	□□□□□ -1.67
PTPN12-213	ENST00000519553	TOM1L2	Q6ZVM7	507 aa		4.61	□□□□□ -1.67
PTPN12-213	ENST00000519553	RHOXF1	Q8NHV9	184 aa		4.61	□□□□□ -1.67
PTPN12-213	ENST00000519553	BIRC7	Q96CA5	298 aa		4.61	□□□□□ -1.67
PTPN12-213	ENST00000519553	MCCC1	Q96RQ3	725 aa	Predicted RBP	4.61	□□□□□ -1.67
PTPN12-213	ENST00000519553	TRPV6	Q9H1D0	765 aa		4.61	□□□□□ -1.67
PTPN12-213	ENST00000519553	ADGRL4	Q9HBW9	690 aa		4.61	□□□□□ -1.67
PTPN12-213	ENST00000519553	FAM120C	Q9NX05	1096 aa	Known RBP	4.61	□□□□□ -1.67
PTPN12-213	ENST00000519553	VPS54	Q9P1Q0	977 aa		4.61	□□□□□ -1.67
PTPN12-213	ENST00000519553	SEC14L4	Q9UDX3	406 aa		4.61	□□□□□ -1.67
PTPN12-213	ENST00000519553	TUBGCP4	Q9UGJ1	667 aa		4.61	□□□□□ -1.67
PTPN12-213	ENST00000519553	CCDC69	A6NI79	296 aa		4.6	□□□□□ -1.67
PTPN12-213	ENST00000519553	CHEK1	O14757	476 aa		4.6	□□□□□ -1.67
PTPN12-213	ENST00000519553	SRPX2	O60687	465 aa	Predicted RBP	4.6	□□□□□ -1.67
PTPN12-213	ENST00000519553	PIGR	P01833	764 aa		4.6	□□□□□ -1.67
PTPN12-213	ENST00000519553	HSD17B1	P14061	328 aa		4.6	□□□□□ -1.67
PTPN12-213	ENST00000519553	TRA2B	P62995	288 aa	Known RBP	4.6	□□□□□ -1.67
PTPN12-213	ENST00000519553	CCZ1B	P86790	482 aa		4.6	□□□□□ -1.67
PTPN12-213	ENST00000519553	CCZ1	P86791	482 aa	Predicted RBP	4.6	□□□□□ -1.67
PTPN12-213	ENST00000519553	NAAA	Q02083	359 aa		4.6	□□□□□ -1.67
PTPN12-213	ENST00000519553	RUNX3	Q13761	415 aa		4.6	□□□□□ -1.67
PTPN12-213	ENST00000519553	HKDC1	Q2TB90	917 aa		4.6	□□□□□ -1.67
PTPN12-213	ENST00000519553	ACER2	Q5QJU3	275 aa		4.6	□□□□□ -1.67

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