RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 CXorf40BQ96DE9 158 aa11.73□□□□□ -0.53
PCM1-203ENST00000517545 ATF6BQ99941 703 aa11.73□□□□□ -0.53
PCM1-203ENST00000517545 ARPC5LQ9BPX5 153 aa11.73□□□□□ -0.53
PCM1-203ENST00000517545 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.73□□□□□ -0.53
PCM1-203ENST00000517545 SPNS1Q9H2V7 528 aa11.73□□□□□ -0.53
PCM1-203ENST00000517545 SEMA3GQ9NS98 782 aa11.73□□□□□ -0.53
PCM1-203ENST00000517545 ZSCAN32Q9NX65 697 aa11.73□□□□□ -0.53
PCM1-203ENST00000517545 SATB2Q9UPW6 733 aa11.73□□□□□ -0.53
PCM1-203ENST00000517545 INMT-MINDY4F8WBC2 141 aa11.72□□□□□ -0.53
PCM1-203ENST00000517545 FABP7O15540 132 aa11.72□□□□□ -0.53
PCM1-203ENST00000517545 IL3P08700 152 aa11.72□□□□□ -0.53
PCM1-203ENST00000517545 CKBP12277 381 aa11.72□□□□□ -0.53
PCM1-203ENST00000517545 LMAN2Q12907 356 aa11.72□□□□□ -0.53
PCM1-203ENST00000517545 MRPL28Q13084 256 aaKnown RBP11.72□□□□□ -0.53
PCM1-203ENST00000517545 KCNC3Q14003 757 aa11.72□□□□□ -0.53
PCM1-203ENST00000517545 ZNF57Q68EA5 555 aaPredicted RBP11.72□□□□□ -0.53
PCM1-203ENST00000517545 FAM71E1Q6IPT2 247 aa11.72□□□□□ -0.53
PCM1-203ENST00000517545 OLIG3Q7RTU3 272 aa11.72□□□□□ -0.53
PCM1-203ENST00000517545 LSRQ86X29 649 aaPredicted RBP11.72□□□□□ -0.53
PCM1-203ENST00000517545 RASGRP3Q8IV61 690 aa11.72□□□□□ -0.53
PCM1-203ENST00000517545 FAM26EQ8N5C1 309 aa11.72□□□□□ -0.53
PCM1-203ENST00000517545 TMEM163Q8TC26 289 aa11.72□□□□□ -0.53
PCM1-203ENST00000517545 GPBP1L1Q9HC44 474 aaPredicted RBP11.72□□□□□ -0.53
PCM1-203ENST00000517545 PCDHGB7Q9Y5F8 929 aa11.72□□□□□ -0.53
PCM1-203ENST00000517545 C5orf58C9J3I9 102 aa11.72□□□□□ -0.53
PCM1-203ENST00000517545 FAAHO00519 579 aa11.72□□□□□ -0.53
PCM1-203ENST00000517545 TSPAN6O43657 245 aa11.72□□□□□ -0.53
PCM1-203ENST00000517545 ORC5O43913 435 aa11.72□□□□□ -0.53
PCM1-203ENST00000517545 GREM1O60565 184 aa11.72□□□□□ -0.53
PCM1-203ENST00000517545 SLCO2B1O94956 709 aa11.72□□□□□ -0.53
PCM1-203ENST00000517545 NR2F6P10588 404 aa11.72□□□□□ -0.53
PCM1-203ENST00000517545 ACADMP11310 421 aa11.72□□□□□ -0.53
PCM1-203ENST00000517545 CTGFP29279 349 aa11.72□□□□□ -0.53
PCM1-203ENST00000517545 DGKGP49619 791 aa11.72□□□□□ -0.53
PCM1-203ENST00000517545 EVX1P49640 407 aa11.72□□□□□ -0.53
PCM1-203ENST00000517545 SLBPQ14493 270 aaKnown RBP eCLIP11.72□□□□□ -0.53
PCM1-203ENST00000517545 DNAJC5GQ8N7S2 189 aa11.72□□□□□ -0.53
PCM1-203ENST00000517545 OMA1Q96E52 524 aa11.72□□□□□ -0.53
PCM1-203ENST00000517545 PDXPQ96GD0 296 aa11.72□□□□□ -0.53
PCM1-203ENST00000517545 TMED9Q9BVK6 235 aa11.72□□□□□ -0.53
PCM1-203ENST00000517545 CTPS2Q9NRF8 586 aa11.72□□□□□ -0.53
PCM1-203ENST00000517545 TAAR2Q9P1P5 351 aa11.72□□□□□ -0.53
PCM1-203ENST00000517545 STOML2Q9UJZ1 356 aa11.72□□□□□ -0.53
PCM1-203ENST00000517545 CDH10Q9Y6N8 788 aa11.72□□□□□ -0.53
PCM1-203ENST00000517545 DOCK6Q96HP0 2047 aa11.72□□□□□ -0.53
PCM1-203ENST00000517545 STK25O00506 426 aa11.72□□□□□ -0.53
PCM1-203ENST00000517545 DVL2O14641 736 aa11.72□□□□□ -0.53
PCM1-203ENST00000517545 SHOXO15266 292 aa11.72□□□□□ -0.53
PCM1-203ENST00000517545 ADAMTS4O75173 837 aa11.72□□□□□ -0.53
PCM1-203ENST00000517545 SLC43A1O75387 559 aa11.72□□□□□ -0.53
PCM1-203ENST00000517545 NME6O75414 186 aaPredicted RBP11.72□□□□□ -0.53
PCM1-203ENST00000517545 CYBAP13498 195 aa11.72□□□□□ -0.53
PCM1-203ENST00000517545 ENPP1P22413 925 aa11.72□□□□□ -0.53
PCM1-203ENST00000517545 AP2S1P53680 142 aaPredicted RBP11.72□□□□□ -0.53
PCM1-203ENST00000517545 ANKRD54Q6NXT1 300 aa11.72□□□□□ -0.53
PCM1-203ENST00000517545 PODNL1Q6PEZ8 512 aa11.72□□□□□ -0.53
PCM1-203ENST00000517545 LHFPL3Q86UP9 236 aa11.72□□□□□ -0.53
PCM1-203ENST00000517545 ZNF740Q8NDX6 193 aa11.72□□□□□ -0.53
PCM1-203ENST00000517545 ANKK1Q8NFD2 765 aa11.72□□□□□ -0.53
PCM1-203ENST00000517545 PCNPQ8WW12 178 aaKnown RBP11.72□□□□□ -0.53
PCM1-203ENST00000517545 AKAP1Q92667 903 aaKnown RBP eCLIP11.72□□□□□ -0.53
PCM1-203ENST00000517545 KCNJ15Q99712 375 aa11.72□□□□□ -0.53
PCM1-203ENST00000517545 SUV39H2Q9H5I1 410 aa11.72□□□□□ -0.53
PCM1-203ENST00000517545 ZDHHC6Q9H6R6 413 aa11.72□□□□□ -0.53
PCM1-203ENST00000517545 SLAMF7Q9NQ25 335 aa11.72□□□□□ -0.53
PCM1-203ENST00000517545 ANKDD1BA6NHY2 528 aa11.71□□□□□ -0.53
PCM1-203ENST00000517545 TMEM88BA6NKF7 163 aa11.71□□□□□ -0.53
PCM1-203ENST00000517545 B8ZZF3 427 aa11.71□□□□□ -0.53
PCM1-203ENST00000517545 M0R3H8 397 aa11.71□□□□□ -0.53
PCM1-203ENST00000517545 NPC1O15118 1278 aa11.71□□□□□ -0.53
PCM1-203ENST00000517545 AKAP8O43823 692 aaKnown RBP11.71□□□□□ -0.53
PCM1-203ENST00000517545 MMP11P24347 488 aa11.71□□□□□ -0.53
PCM1-203ENST00000517545 PDHA2P29803 388 aa11.71□□□□□ -0.53
PCM1-203ENST00000517545 MAPK8P45983 427 aa11.71□□□□□ -0.53
PCM1-203ENST00000517545 INPP1P49441 399 aa11.71□□□□□ -0.53
PCM1-203ENST00000517545 CTSCP53634 463 aa11.71□□□□□ -0.53
PCM1-203ENST00000517545 TLE2Q04725 743 aa11.71□□□□□ -0.53
PCM1-203ENST00000517545 TPBGQ13641 420 aa11.71□□□□□ -0.53
PCM1-203ENST00000517545 FCN2Q15485 313 aa11.71□□□□□ -0.53
PCM1-203ENST00000517545 TAF1CQ15572 869 aaPredicted RBP11.71□□□□□ -0.53
PCM1-203ENST00000517545 TAF12Q16514 161 aa11.71□□□□□ -0.53
PCM1-203ENST00000517545 FAM26DQ5JW98 314 aa11.71□□□□□ -0.53
PCM1-203ENST00000517545 ZBTB37Q5TC79 503 aa11.71□□□□□ -0.53
PCM1-203ENST00000517545 ZER1Q7Z7L7 766 aa11.71□□□□□ -0.53
PCM1-203ENST00000517545 C2orf69Q8N8R5 385 aa11.71□□□□□ -0.53
PCM1-203ENST00000517545 ARL14EPQ8N8R7 260 aaPredicted RBP11.71□□□□□ -0.53
PCM1-203ENST00000517545 UFD1Q92890 307 aa11.71□□□□□ -0.53
PCM1-203ENST00000517545 RNFT2Q96EX2 444 aa11.71□□□□□ -0.53
PCM1-203ENST00000517545 POLDIP3Q9BY77 421 aaKnown RBP11.71□□□□□ -0.53
PCM1-203ENST00000517545 PLA2G12AQ9BZM1 189 aa11.71□□□□□ -0.53
PCM1-203ENST00000517545 ABCG4Q9H172 646 aa11.71□□□□□ -0.53
PCM1-203ENST00000517545 PPIL3Q9H2H8 161 aaKnown RBP11.71□□□□□ -0.53
PCM1-203ENST00000517545 TBC1D17Q9HA65 648 aa11.71□□□□□ -0.53
PCM1-203ENST00000517545 PAK6Q9NQU5 681 aaPredicted RBP11.71□□□□□ -0.53
PCM1-203ENST00000517545 FBXW2Q9UKT8 454 aa11.71□□□□□ -0.53
PCM1-203ENST00000517545 KIAA1671Q9BY89 1806 aa11.71□□□□□ -0.53
PCM1-203ENST00000517545 PRRC2BQ5JSZ5 2229 aaKnown RBP11.71□□□□□ -0.54
PCM1-203ENST00000517545 C2orf92A0A1B0GVN3 265 aa11.71□□□□□ -0.54
PCM1-203ENST00000517545 LANCL1O43813 399 aa11.71□□□□□ -0.54
PCM1-203ENST00000517545 RPLP2P05387 115 aaKnown RBP11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms