RNA–Protein interactions for RNA: ENST00000517049.1

RNU6-1271P-201, Transcript of RNA, U6 small nuclear 1271, pseudogene, humanhuman

BASIC

Gene RNU6-1271P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1271P-201ENST00000517049 CPXCR1Q8N123 301 aa0.28□□□□□ -2.36
RNU6-1271P-201ENST00000517049 TMEM99Q8N816 258 aa0.28□□□□□ -2.36
RNU6-1271P-201ENST00000517049 APPL2Q8NEU8 664 aa0.28□□□□□ -2.36
RNU6-1271P-201ENST00000517049 CHCHD10Q8WYQ3 142 aaPredicted RBP0.28□□□□□ -2.36
RNU6-1271P-201ENST00000517049 PNPLA2Q96AD5 504 aa0.28□□□□□ -2.36
RNU6-1271P-201ENST00000517049 IL4I1Q96RQ9 567 aa0.28□□□□□ -2.36
RNU6-1271P-201ENST00000517049 MBOAT4Q96T53 435 aa0.28□□□□□ -2.36
RNU6-1271P-201ENST00000517049 TRIM9Q9C026 710 aa0.28□□□□□ -2.36
RNU6-1271P-201ENST00000517049 OLA1Q9NTK5 396 aaKnown RBP0.28□□□□□ -2.36
RNU6-1271P-201ENST00000517049 GIMAP4Q9NUV9 329 aa0.28□□□□□ -2.36
RNU6-1271P-201ENST00000517049 TMOD3Q9NYL9 352 aa0.28□□□□□ -2.36
RNU6-1271P-201ENST00000517049 EIF3KQ9UBQ5 218 aaKnown RBP0.28□□□□□ -2.36
RNU6-1271P-201ENST00000517049 ERVW-1Q9UQF0 538 aa0.28□□□□□ -2.36
RNU6-1271P-201ENST00000517049 AHNAKQ09666 5890 aaKnown RBP0.28□□□□□ -2.36
RNU6-1271P-201ENST00000517049 SCN2AQ99250 2005 aa0.28□□□□□ -2.37
RNU6-1271P-201ENST00000517049 DOCK9Q9BZ29 2069 aa0.28□□□□□ -2.37
RNU6-1271P-201ENST00000517049 PRRC2BQ5JSZ5 2229 aaKnown RBP0.28□□□□□ -2.37
RNU6-1271P-201ENST00000517049 LTBP4Q8N2S1 1624 aa0.27□□□□□ -2.37
RNU6-1271P-201ENST00000517049 PTP4A3O75365 173 aa0.27□□□□□ -2.37
RNU6-1271P-201ENST00000517049 CALCAP01258 141 aa0.27□□□□□ -2.37
RNU6-1271P-201ENST00000517049 COL8A2P25067 703 aa0.27□□□□□ -2.37
RNU6-1271P-201ENST00000517049 HOXD10P28358 340 aa0.27□□□□□ -2.37
RNU6-1271P-201ENST00000517049 HTR1EP28566 365 aa0.27□□□□□ -2.37
RNU6-1271P-201ENST00000517049 GCH1P30793 250 aa0.27□□□□□ -2.37
RNU6-1271P-201ENST00000517049 ALDH3B2P48448 385 aa0.27□□□□□ -2.37
RNU6-1271P-201ENST00000517049 UCP2P55851 309 aa0.27□□□□□ -2.37
RNU6-1271P-201ENST00000517049 CEACAM7Q14002 265 aa0.27□□□□□ -2.37
RNU6-1271P-201ENST00000517049 NTRK2Q16620 822 aa0.27□□□□□ -2.37
RNU6-1271P-201ENST00000517049 DUSP28Q4G0W2 176 aa0.27□□□□□ -2.37
RNU6-1271P-201ENST00000517049 KLHL10Q6JEL2 608 aa0.27□□□□□ -2.37
RNU6-1271P-201ENST00000517049 LINC00336Q6ZUF6 198 aa0.27□□□□□ -2.37
RNU6-1271P-201ENST00000517049 CAMKMTQ7Z624 323 aa0.27□□□□□ -2.37
RNU6-1271P-201ENST00000517049 TTC5Q8N0Z6 440 aa0.27□□□□□ -2.37
RNU6-1271P-201ENST00000517049 C6orf223Q8N319 242 aa0.27□□□□□ -2.37
RNU6-1271P-201ENST00000517049 SLC4A11Q8NBS3 891 aa0.27□□□□□ -2.37
RNU6-1271P-201ENST00000517049 CHDHQ8NE62 594 aaPredicted RBP0.27□□□□□ -2.37
RNU6-1271P-201ENST00000517049 UCMAQ8WVF2 138 aa0.27□□□□□ -2.37
RNU6-1271P-201ENST00000517049 TEKT4Q8WW24 435 aa0.27□□□□□ -2.37
RNU6-1271P-201ENST00000517049 TCP11Q8WWU5 503 aa0.27□□□□□ -2.37
RNU6-1271P-201ENST00000517049 PRPF31Q8WWY3 499 aaKnown RBP0.27□□□□□ -2.37
RNU6-1271P-201ENST00000517049 DCUN1D4Q92564 292 aa0.27□□□□□ -2.37
RNU6-1271P-201ENST00000517049 ZNF274Q96GC6 653 aaPredicted RBP0.27□□□□□ -2.37
RNU6-1271P-201ENST00000517049 TSNARE1Q96NA8 513 aa0.27□□□□□ -2.37
RNU6-1271P-201ENST00000517049 CNPY3Q9BT09 278 aa0.27□□□□□ -2.37
RNU6-1271P-201ENST00000517049 CARD9Q9H257 536 aa0.27□□□□□ -2.37
RNU6-1271P-201ENST00000517049 PTGES2Q9H7Z7 377 aa0.27□□□□□ -2.37
RNU6-1271P-201ENST00000517049 NAP1L2Q9ULW6 460 aaPredicted RBP0.27□□□□□ -2.37
RNU6-1271P-201ENST00000517049 RNF115Q9Y4L5 304 aa0.27□□□□□ -2.37
RNU6-1271P-201ENST00000517049 SHANK1Q9Y566 2161 aa0.26□□□□□ -2.37
RNU6-1271P-201ENST00000517049 MACROD2A1Z1Q3 448 aa0.26□□□□□ -2.37
RNU6-1271P-201ENST00000517049 PRAF2O60831 178 aa0.26□□□□□ -2.37
RNU6-1271P-201ENST00000517049 SEMG1P04279 462 aa0.26□□□□□ -2.37
RNU6-1271P-201ENST00000517049 ALPIP09923 528 aa0.26□□□□□ -2.37
RNU6-1271P-201ENST00000517049 SAT1P21673 171 aa0.26□□□□□ -2.37
RNU6-1271P-201ENST00000517049 CD1BP29016 333 aa0.26□□□□□ -2.37
RNU6-1271P-201ENST00000517049 CDX1P47902 265 aaPredicted RBP0.26□□□□□ -2.37
RNU6-1271P-201ENST00000517049 LIG4P49917 911 aa0.26□□□□□ -2.37
RNU6-1271P-201ENST00000517049 CRISP1P54107 249 aa0.26□□□□□ -2.37
RNU6-1271P-201ENST00000517049 ACSM1Q08AH1 577 aa0.26□□□□□ -2.37
RNU6-1271P-201ENST00000517049 TAF9Q16594 264 aa0.26□□□□□ -2.37
RNU6-1271P-201ENST00000517049 DCST2Q5T1A1 773 aa0.26□□□□□ -2.37
RNU6-1271P-201ENST00000517049 CENPVQ7Z7K6 275 aaPredicted RBP0.26□□□□□ -2.37
RNU6-1271P-201ENST00000517049 CROCCP3Q8IVE0 287 aa0.26□□□□□ -2.37
RNU6-1271P-201ENST00000517049 APCDD1Q8J025 514 aa0.26□□□□□ -2.37
RNU6-1271P-201ENST00000517049 C20orf203Q8NBC4 194 aa0.26□□□□□ -2.37
RNU6-1271P-201ENST00000517049 FAM120BQ96EK7 910 aaKnown RBP0.26□□□□□ -2.37
RNU6-1271P-201ENST00000517049 FAM210BQ96KR6 192 aa0.26□□□□□ -2.37
RNU6-1271P-201ENST00000517049 SMIM14Q96QK8 99 aa0.26□□□□□ -2.37
RNU6-1271P-201ENST00000517049 SLC26A6Q9BXS9 759 aa0.26□□□□□ -2.37
RNU6-1271P-201ENST00000517049 OPN3Q9H1Y3 402 aaPredicted RBP0.26□□□□□ -2.37
RNU6-1271P-201ENST00000517049 MTIF3Q9H2K0 278 aaKnown RBP0.26□□□□□ -2.37
RNU6-1271P-201ENST00000517049 PGAP2Q9UHJ9 254 aa0.26□□□□□ -2.37
RNU6-1271P-201ENST00000517049 ZNF225Q9UK10 706 aa0.26□□□□□ -2.37
RNU6-1271P-201ENST00000517049 RUVBL2Q9Y230 463 aaKnown RBP0.26□□□□□ -2.37
RNU6-1271P-201ENST00000517049 COL11A1P12107 1806 aaPredicted RBP0.26□□□□□ -2.37
RNU6-1271P-201ENST00000517049 EDDM13A0A1B0GTR0 161 aa0.25□□□□□ -2.37
RNU6-1271P-201ENST00000517049 PGPEP1LA6NFU8 196 aa0.25□□□□□ -2.37
RNU6-1271P-201ENST00000517049 GLOD5A6NK44 160 aa0.25□□□□□ -2.37
RNU6-1271P-201ENST00000517049 F5H0A9 414 aaPredicted RBP0.25□□□□□ -2.37
RNU6-1271P-201ENST00000517049 CCSO14618 274 aa0.25□□□□□ -2.37
RNU6-1271P-201ENST00000517049 ZBED4O75132 1171 aa0.25□□□□□ -2.37
RNU6-1271P-201ENST00000517049 CSO75390 466 aaKnown RBP0.25□□□□□ -2.37
RNU6-1271P-201ENST00000517049 LUC7L3O95232 432 aaKnown RBP0.25□□□□□ -2.37
RNU6-1271P-201ENST00000517049 ADRB3P13945 408 aa0.25□□□□□ -2.37
RNU6-1271P-201ENST00000517049 SLC7A2P52569 658 aa0.25□□□□□ -2.37
RNU6-1271P-201ENST00000517049 MFAP3P55082 362 aa0.25□□□□□ -2.37
RNU6-1271P-201ENST00000517049 RPP38P78345 283 aaKnown RBP0.25□□□□□ -2.37
RNU6-1271P-201ENST00000517049 DDX10Q13206 875 aaKnown RBP0.25□□□□□ -2.37
RNU6-1271P-201ENST00000517049 ZNF674Q2M3X9 581 aa0.25□□□□□ -2.37
RNU6-1271P-201ENST00000517049 ENPP7Q6UWV6 458 aa0.25□□□□□ -2.37
RNU6-1271P-201ENST00000517049 APOOLQ6UXV4 268 aa0.25□□□□□ -2.37
RNU6-1271P-201ENST00000517049 NRARPQ7Z6K4 114 aa0.25□□□□□ -2.37
RNU6-1271P-201ENST00000517049 FAM71E2Q8N5Q1 922 aa0.25□□□□□ -2.37
RNU6-1271P-201ENST00000517049 ICA1LQ8NDH6 482 aa0.25□□□□□ -2.37
RNU6-1271P-201ENST00000517049 SPATA17Q96L03 361 aa0.25□□□□□ -2.37
RNU6-1271P-201ENST00000517049 TSSK2Q96PF2 358 aa0.25□□□□□ -2.37
RNU6-1271P-201ENST00000517049 SYNCQ9H7C4 482 aa0.25□□□□□ -2.37
RNU6-1271P-201ENST00000517049 ADGRL4Q9HBW9 690 aa0.25□□□□□ -2.37
RNU6-1271P-201ENST00000517049 MARCH5Q9NX47 278 aa0.25□□□□□ -2.37
RNU6-1271P-201ENST00000517049 CABIN1Q9Y6J0 2220 aa0.25□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms