RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 MIPOL1Q8TD10 442 aa14.54□□□□□ -0.08
THUMPD3-210ENST00000515662 TREX2Q9BQ50 279 aaPredicted RBP14.54□□□□□ -0.08
THUMPD3-210ENST00000515662 RSPO3Q9BXY4 272 aaPredicted RBP14.54□□□□□ -0.08
THUMPD3-210ENST00000515662 LIN28AQ9H9Z2 209 aaKnown RBP14.54□□□□□ -0.08
THUMPD3-210ENST00000515662 PRDM9Q9NQV7 894 aa14.54□□□□□ -0.08
THUMPD3-210ENST00000515662 MS4A12Q9NXJ0 267 aa14.54□□□□□ -0.08
THUMPD3-210ENST00000515662 SH3GLB1Q9Y371 365 aa14.54□□□□□ -0.08
THUMPD3-210ENST00000515662 LYVE1Q9Y5Y7 322 aa14.54□□□□□ -0.08
THUMPD3-210ENST00000515662 LOC100130705A0A1B0GUX0 176 aa14.54□□□□□ -0.08
THUMPD3-210ENST00000515662 TMEM247A6NEH6 219 aa14.54□□□□□ -0.08
THUMPD3-210ENST00000515662 ZNF860A6NHJ4 632 aa14.54□□□□□ -0.08
THUMPD3-210ENST00000515662 PDE9AO76083 593 aa14.54□□□□□ -0.08
THUMPD3-210ENST00000515662 DCNP07585 359 aaKnown RBP14.54□□□□□ -0.08
THUMPD3-210ENST00000515662 ITGAMP11215 1152 aa14.54□□□□□ -0.08
THUMPD3-210ENST00000515662 CDH3P22223 829 aa14.54□□□□□ -0.08
THUMPD3-210ENST00000515662 TLX1P31314 330 aaPredicted RBP14.54□□□□□ -0.08
THUMPD3-210ENST00000515662 POLR2IP36954 125 aaKnown RBP14.54□□□□□ -0.08
THUMPD3-210ENST00000515662 YAP1P46937 504 aaKnown RBP14.54□□□□□ -0.08
THUMPD3-210ENST00000515662 TUBA4AP68366 448 aa14.54□□□□□ -0.08
THUMPD3-210ENST00000515662 SIM1P81133 766 aaPredicted RBP14.54□□□□□ -0.08
THUMPD3-210ENST00000515662 PRR5P85299 388 aa14.54□□□□□ -0.08
THUMPD3-210ENST00000515662 COL9A2Q14055 689 aaPredicted RBP14.54□□□□□ -0.08
THUMPD3-210ENST00000515662 SIM2Q14190 667 aaPredicted RBP14.54□□□□□ -0.08
THUMPD3-210ENST00000515662 LASP1Q14847 261 aaKnown RBP14.54□□□□□ -0.08
THUMPD3-210ENST00000515662 LTB4RQ15722 352 aa14.54□□□□□ -0.08
THUMPD3-210ENST00000515662 KLHL35Q6PF15 583 aa14.54□□□□□ -0.08
THUMPD3-210ENST00000515662 THAP5Q7Z6K1 395 aa14.54□□□□□ -0.08
THUMPD3-210ENST00000515662 APOBEC4Q8WW27 367 aaKnown RBP14.54□□□□□ -0.08
THUMPD3-210ENST00000515662 OTUB1Q96FW1 271 aaPredicted RBP14.54□□□□□ -0.08
THUMPD3-210ENST00000515662 CCDC3Q9BQI4 270 aa14.54□□□□□ -0.08
THUMPD3-210ENST00000515662 YTHDF1Q9BYJ9 559 aaKnown RBP14.54□□□□□ -0.08
THUMPD3-210ENST00000515662 EPB41L1Q9H4G0 881 aa14.54□□□□□ -0.08
THUMPD3-210ENST00000515662 C3orf14Q9HBI5 128 aa14.54□□□□□ -0.08
THUMPD3-210ENST00000515662 ANKRD33BA6NCL7 494 aa14.53□□□□□ -0.08
THUMPD3-210ENST00000515662 TNFRSF11BO00300 401 aa14.53□□□□□ -0.08
THUMPD3-210ENST00000515662 AQP9O43315 295 aa14.53□□□□□ -0.08
THUMPD3-210ENST00000515662 DNAJB5O75953 348 aa14.53□□□□□ -0.08
THUMPD3-210ENST00000515662 NR2F1P10589 423 aa14.53□□□□□ -0.08
THUMPD3-210ENST00000515662 XCR1P46094 333 aa14.53□□□□□ -0.08
THUMPD3-210ENST00000515662 ANXA11P50995 505 aaKnown RBP14.53□□□□□ -0.08
THUMPD3-210ENST00000515662 XKP51811 444 aa14.53□□□□□ -0.08
THUMPD3-210ENST00000515662 HNRNPKP61978 463 aaKnown RBP eCLIP14.53□□□□□ -0.08
THUMPD3-210ENST00000515662 PUM1Q14671 1186 aaKnown RBP eCLIP14.53□□□□□ -0.08
THUMPD3-210ENST00000515662 C17orf82Q86X59 251 aaPredicted RBP14.53□□□□□ -0.08
THUMPD3-210ENST00000515662 UBALD2Q8IYN6 164 aa14.53□□□□□ -0.08
THUMPD3-210ENST00000515662 SAMD14Q8IZD0 417 aaPredicted RBP14.53□□□□□ -0.08
THUMPD3-210ENST00000515662 LRRC25Q8N386 305 aaPredicted RBP14.53□□□□□ -0.08
THUMPD3-210ENST00000515662 DEFB123Q8N688 67 aa14.53□□□□□ -0.08
THUMPD3-210ENST00000515662 C19orf47Q8N9M1 422 aaKnown RBP14.53□□□□□ -0.08
THUMPD3-210ENST00000515662 GPR32P1Q8NGA4 272 aa14.53□□□□□ -0.08
THUMPD3-210ENST00000515662 OR4K14Q8NGD5 310 aa14.53□□□□□ -0.08
THUMPD3-210ENST00000515662 OR4C15Q8NGM1 316 aa14.53□□□□□ -0.08
THUMPD3-210ENST00000515662 C16orf58Q96GQ5 468 aa14.53□□□□□ -0.08
THUMPD3-210ENST00000515662 ZNF607Q96SK3 696 aa14.53□□□□□ -0.08
THUMPD3-210ENST00000515662 YIPF4Q9BSR8 244 aa14.53□□□□□ -0.08
THUMPD3-210ENST00000515662 IL21RQ9HBE5 538 aa14.53□□□□□ -0.08
THUMPD3-210ENST00000515662 STARD5Q9NSY2 213 aa14.53□□□□□ -0.08
THUMPD3-210ENST00000515662 EXD2Q9NVH0 621 aa14.53□□□□□ -0.08
THUMPD3-210ENST00000515662 SIT1Q9Y3P8 196 aa14.53□□□□□ -0.08
THUMPD3-210ENST00000515662 NAALAD2Q9Y3Q0 740 aa14.53□□□□□ -0.08
THUMPD3-210ENST00000515662 ENPP4Q9Y6X5 453 aa14.53□□□□□ -0.08
THUMPD3-210ENST00000515662 SCN3AQ9NY46 2000 aa14.53□□□□□ -0.08
THUMPD3-210ENST00000515662 SLC9B1P1A6NJY1 282 aa14.53□□□□□ -0.08
THUMPD3-210ENST00000515662 TRIM64CA6NLI5 447 aa14.53□□□□□ -0.08
THUMPD3-210ENST00000515662 LMO7DNF2Z398 122 aa14.53□□□□□ -0.08
THUMPD3-210ENST00000515662 GALR3O60755 368 aaPredicted RBP14.53□□□□□ -0.08
THUMPD3-210ENST00000515662 JRKO75564 520 aa14.53□□□□□ -0.08
THUMPD3-210ENST00000515662 PPP2R1BP30154 601 aa14.53□□□□□ -0.08
THUMPD3-210ENST00000515662 SLC5A2P31639 672 aa14.53□□□□□ -0.08
THUMPD3-210ENST00000515662 CAPZBP47756 277 aa14.53□□□□□ -0.08
THUMPD3-210ENST00000515662 CSNK1EP49674 416 aaKnown RBP14.53□□□□□ -0.08
THUMPD3-210ENST00000515662 KCNC4Q03721 635 aa14.53□□□□□ -0.08
THUMPD3-210ENST00000515662 ATG16L2Q8NAA4 619 aa14.53□□□□□ -0.08
THUMPD3-210ENST00000515662 NUP43Q8NFH3 380 aa14.53□□□□□ -0.08
THUMPD3-210ENST00000515662 DNASE2BQ8WZ79 361 aa14.53□□□□□ -0.08
THUMPD3-210ENST00000515662 KAT2AQ92830 837 aa14.53□□□□□ -0.08
THUMPD3-210ENST00000515662 PIP5K1AQ99755 562 aa14.53□□□□□ -0.08
THUMPD3-210ENST00000515662 ING2Q9H160 280 aa14.53□□□□□ -0.08
THUMPD3-210ENST00000515662 ANKRA2Q9H9E1 313 aa14.53□□□□□ -0.08
THUMPD3-210ENST00000515662 TUBA8Q9NY65 449 aaPredicted RBP14.53□□□□□ -0.08
THUMPD3-210ENST00000515662 NDUFA13Q9P0J0 144 aa14.53□□□□□ -0.08
THUMPD3-210ENST00000515662 KIF17Q9P2E2 1029 aa14.53□□□□□ -0.08
THUMPD3-210ENST00000515662 PCDHGA8Q9Y5G5 932 aa14.53□□□□□ -0.08
THUMPD3-210ENST00000515662 A0A087WXM4 84 aa14.52□□□□□ -0.08
THUMPD3-210ENST00000515662 LILRA5A6NI73 299 aa14.52□□□□□ -0.08
THUMPD3-210ENST00000515662 J3KTA2 159 aa14.52□□□□□ -0.08
THUMPD3-210ENST00000515662 IFNW1P05000 195 aa14.52□□□□□ -0.08
THUMPD3-210ENST00000515662 PROS1P07225 676 aa14.52□□□□□ -0.08
THUMPD3-210ENST00000515662 ELK4P28324 431 aa14.52□□□□□ -0.08
THUMPD3-210ENST00000515662 CDH12P55289 794 aa14.52□□□□□ -0.08
THUMPD3-210ENST00000515662 SPIBQ01892 262 aa14.52□□□□□ -0.08
THUMPD3-210ENST00000515662 DMWDQ09019 674 aa14.52□□□□□ -0.08
THUMPD3-210ENST00000515662 DEFB133Q30KQ1 61 aa14.52□□□□□ -0.08
THUMPD3-210ENST00000515662 ZNF691Q5VV52 312 aa14.52□□□□□ -0.08
THUMPD3-210ENST00000515662 B3GNT6Q6ZMB0 384 aa14.52□□□□□ -0.08
THUMPD3-210ENST00000515662 OR4N5Q8IXE1 308 aa14.52□□□□□ -0.08
THUMPD3-210ENST00000515662 COL21A1Q96P44 957 aa14.52□□□□□ -0.08
THUMPD3-210ENST00000515662 SLC38A3Q99624 504 aa14.52□□□□□ -0.08
THUMPD3-210ENST00000515662 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.52□□□□□ -0.08
THUMPD3-210ENST00000515662 RIBC2Q9H4K1 309 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms