RNA–Protein interactions for RNA: ENST00000515198.5

PTCD2-210, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 5

Gene PTCD2, Length 881 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-210ENST00000515198 OPN5Q6U736 354 aa11.58□□□□□ -0.56
PTCD2-210ENST00000515198 C9orf40Q8IXQ3 194 aa11.58□□□□□ -0.56
PTCD2-210ENST00000515198 OR6Y1Q8NGX8 325 aa11.58□□□□□ -0.56
PTCD2-210ENST00000515198 DNAJB8Q8NHS0 232 aa11.58□□□□□ -0.56
PTCD2-210ENST00000515198 SLC22A8Q8TCC7 542 aa11.58□□□□□ -0.56
PTCD2-210ENST00000515198 AGR3Q8TD06 166 aa11.58□□□□□ -0.56
PTCD2-210ENST00000515198 DOK4Q8TEW6 326 aa11.58□□□□□ -0.56
PTCD2-210ENST00000515198 SCMH1Q96GD3 660 aa11.58□□□□□ -0.56
PTCD2-210ENST00000515198 GAL3ST4Q96RP7 486 aa11.58□□□□□ -0.56
PTCD2-210ENST00000515198 RASL10BQ96S79 203 aa11.58□□□□□ -0.56
PTCD2-210ENST00000515198 BARD1Q99728 777 aaKnown RBP11.58□□□□□ -0.56
PTCD2-210ENST00000515198 BRINP2Q9C0B6 783 aa11.58□□□□□ -0.56
PTCD2-210ENST00000515198 TUBB1Q9H4B7 451 aa11.58□□□□□ -0.56
PTCD2-210ENST00000515198 TMBIM4Q9HC24 238 aa11.58□□□□□ -0.56
PTCD2-210ENST00000515198 MYNNQ9NPC7 610 aa11.58□□□□□ -0.56
PTCD2-210ENST00000515198 MIEF1Q9NQG6 463 aa11.58□□□□□ -0.56
PTCD2-210ENST00000515198 RYDENQ9NUL5 291 aaKnown RBP11.58□□□□□ -0.56
PTCD2-210ENST00000515198 OLAHQ9NV23 265 aa11.58□□□□□ -0.56
PTCD2-210ENST00000515198 HPF1Q9NWY4 346 aa11.58□□□□□ -0.56
PTCD2-210ENST00000515198 ENTPD4Q9Y227 616 aa11.58□□□□□ -0.56
PTCD2-210ENST00000515198 KLF13Q9Y2Y9 288 aaPredicted RBP11.58□□□□□ -0.56
PTCD2-210ENST00000515198 CCL27Q9Y4X3 112 aa11.58□□□□□ -0.56
PTCD2-210ENST00000515198 PTGDR2Q9Y5Y4 395 aa11.58□□□□□ -0.56
PTCD2-210ENST00000515198 CROCCQ5TZA2 2017 aa11.58□□□□□ -0.56
PTCD2-210ENST00000515198 SMG1Q96Q15 3661 aaKnown RBP11.58□□□□□ -0.56
PTCD2-210ENST00000515198 TMEM120BA0PK00 339 aa11.57□□□□□ -0.56
PTCD2-210ENST00000515198 TMEM233B4DJY2 109 aa11.57□□□□□ -0.56
PTCD2-210ENST00000515198 TCP11X1B4DZS4 312 aa11.57□□□□□ -0.56
PTCD2-210ENST00000515198 PIP5K1BO14986 540 aa11.57□□□□□ -0.56
PTCD2-210ENST00000515198 NME2P1O60361 137 aa11.57□□□□□ -0.56
PTCD2-210ENST00000515198 DDCP20711 480 aa11.57□□□□□ -0.56
PTCD2-210ENST00000515198 NME2P22392 152 aa11.57□□□□□ -0.56
PTCD2-210ENST00000515198 GNLYP22749 145 aa11.57□□□□□ -0.56
PTCD2-210ENST00000515198 GRK2P25098 689 aa11.57□□□□□ -0.56
PTCD2-210ENST00000515198 SSTR4P31391 388 aa11.57□□□□□ -0.56
PTCD2-210ENST00000515198 SOX3P41225 446 aa11.57□□□□□ -0.56
PTCD2-210ENST00000515198 ABCE1P61221 599 aaKnown RBP11.57□□□□□ -0.56
PTCD2-210ENST00000515198 MAGOHP61326 146 aaKnown RBP11.57□□□□□ -0.56
PTCD2-210ENST00000515198 RPL38P63173 70 aaKnown RBP11.57□□□□□ -0.56
PTCD2-210ENST00000515198 FUT7Q11130 342 aa11.57□□□□□ -0.56
PTCD2-210ENST00000515198 MPP2Q14168 576 aa11.57□□□□□ -0.56
PTCD2-210ENST00000515198 PRICKLE4Q2TBC4 344 aa11.57□□□□□ -0.56
PTCD2-210ENST00000515198 UGT3A2Q3SY77 523 aa11.57□□□□□ -0.56
PTCD2-210ENST00000515198 GALNTL6Q49A17 601 aa11.57□□□□□ -0.56
PTCD2-210ENST00000515198 HLA-DQA1Q5Y7H0 255 aa11.57□□□□□ -0.56
PTCD2-210ENST00000515198 IL20RBQ6UXL0 311 aa11.57□□□□□ -0.56
PTCD2-210ENST00000515198 C16orf47Q6ZP98 133 aaPredicted RBP11.57□□□□□ -0.56
PTCD2-210ENST00000515198 Q6ZSR9 355 aa11.57□□□□□ -0.56
PTCD2-210ENST00000515198 IKBIPQ70UQ0 350 aa11.57□□□□□ -0.56
PTCD2-210ENST00000515198 GALNTL5Q7Z4T8 443 aa11.57□□□□□ -0.56
PTCD2-210ENST00000515198 KIRREL3Q8IZU9 778 aa11.57□□□□□ -0.56
PTCD2-210ENST00000515198 VWA5B2Q8N398 1253 aa11.57□□□□□ -0.56
PTCD2-210ENST00000515198 SLC15A4Q8N697 577 aa11.57□□□□□ -0.56
PTCD2-210ENST00000515198 ANKRD42Q8N9B4 389 aa11.57□□□□□ -0.56
PTCD2-210ENST00000515198 OR7G1Q8NGA0 311 aa11.57□□□□□ -0.56
PTCD2-210ENST00000515198 OR2T11Q8NH01 316 aa11.57□□□□□ -0.56
PTCD2-210ENST00000515198 EXOSC8Q96B26 276 aaKnown RBP11.57□□□□□ -0.56
PTCD2-210ENST00000515198 CNRIP1Q96F85 164 aaPredicted RBP11.57□□□□□ -0.56
PTCD2-210ENST00000515198 TAAR6Q96RI8 345 aa11.57□□□□□ -0.56
PTCD2-210ENST00000515198 CCT7Q99832 543 aa11.57□□□□□ -0.56
PTCD2-210ENST00000515198 PAIP2Q9BPZ3 127 aaKnown RBP11.57□□□□□ -0.56
PTCD2-210ENST00000515198 HES7Q9BYE0 225 aa11.57□□□□□ -0.56
PTCD2-210ENST00000515198 TIMMDC1Q9NPL8 285 aa11.57□□□□□ -0.56
PTCD2-210ENST00000515198 NKIRAS1Q9NYS0 192 aa11.57□□□□□ -0.56
PTCD2-210ENST00000515198 ZDHHC2Q9UIJ5 367 aa11.57□□□□□ -0.56
PTCD2-210ENST00000515198 TMED5Q9Y3A6 229 aa11.57□□□□□ -0.56
PTCD2-210ENST00000515198 BSNQ9UPA5 3926 aa11.56□□□□□ -0.56
PTCD2-210ENST00000515198 C2orf92A0A1B0GVN3 265 aa11.56□□□□□ -0.56
PTCD2-210ENST00000515198 ANKUB1A6NFN9 424 aa11.56□□□□□ -0.56
PTCD2-210ENST00000515198 KLRC4-KLRK1H3BQV0 150 aa11.56□□□□□ -0.56
PTCD2-210ENST00000515198 LSM1O15116 133 aaKnown RBP11.56□□□□□ -0.56
PTCD2-210ENST00000515198 SKAP2O75563 359 aaPredicted RBP11.56□□□□□ -0.56
PTCD2-210ENST00000515198 OR6B1O95007 311 aa11.56□□□□□ -0.56
PTCD2-210ENST00000515198 CBX6O95503 412 aa11.56□□□□□ -0.56
PTCD2-210ENST00000515198 CT62P0C5K7 136 aa11.56□□□□□ -0.56
PTCD2-210ENST00000515198 EDN3P14138 238 aa11.56□□□□□ -0.56
PTCD2-210ENST00000515198 MAPK1P28482 360 aa11.56□□□□□ -0.56
PTCD2-210ENST00000515198 ARRB2P32121 409 aa11.56□□□□□ -0.56
PTCD2-210ENST00000515198 UQCRFS1P47985 274 aa11.56□□□□□ -0.56
PTCD2-210ENST00000515198 SLC1A6P48664 564 aa11.56□□□□□ -0.56
PTCD2-210ENST00000515198 SLC18A1P54219 525 aa11.56□□□□□ -0.56
PTCD2-210ENST00000515198 MAP4K2Q12851 820 aa11.56□□□□□ -0.56
PTCD2-210ENST00000515198 KIAA0040Q15053 153 aa11.56□□□□□ -0.56
PTCD2-210ENST00000515198 EBPQ15125 230 aaKnown RBP11.56□□□□□ -0.56
PTCD2-210ENST00000515198 PIGGQ5H8A4 983 aa11.56□□□□□ -0.56
PTCD2-210ENST00000515198 FAM71E1Q6IPT2 247 aa11.56□□□□□ -0.56
PTCD2-210ENST00000515198 FAM180BQ6P0A1 224 aa11.56□□□□□ -0.56
PTCD2-210ENST00000515198 RTL4Q6ZR62 310 aa11.56□□□□□ -0.56
PTCD2-210ENST00000515198 ZNF227Q86WZ6 799 aa11.56□□□□□ -0.56
PTCD2-210ENST00000515198 ST6GALNAC3Q8NDV1 305 aa11.56□□□□□ -0.56
PTCD2-210ENST00000515198 NR4A3Q92570 626 aa11.56□□□□□ -0.56
PTCD2-210ENST00000515198 TLCD1Q96CP7 247 aa11.56□□□□□ -0.56
PTCD2-210ENST00000515198 PPP3R2Q96LZ3 170 aa11.56□□□□□ -0.56
PTCD2-210ENST00000515198 ZNF681Q96N22 645 aa11.56□□□□□ -0.56
PTCD2-210ENST00000515198 BBS4Q96RK4 519 aa11.56□□□□□ -0.56
PTCD2-210ENST00000515198 SLX1AQ9BQ83 275 aa11.56□□□□□ -0.56
PTCD2-210ENST00000515198 WWTR1Q9GZV5 400 aa11.56□□□□□ -0.56
PTCD2-210ENST00000515198 OR10A5Q9H207 317 aa11.56□□□□□ -0.56
PTCD2-210ENST00000515198 SLC35C2Q9NQQ7 365 aa11.56□□□□□ -0.56
PTCD2-210ENST00000515198 MAT2BQ9NZL9 334 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms