RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 PRR5P85299 388 aa14.04□□□□□ -0.16
NUP54-217ENST00000514987 HYAL2Q12891 473 aa14.04□□□□□ -0.16
NUP54-217ENST00000514987 PLAG1Q6DJT9 500 aa14.04□□□□□ -0.16
NUP54-217ENST00000514987 NIPAL1Q6NVV3 410 aa14.04□□□□□ -0.16
NUP54-217ENST00000514987 CASP12Q6UXS9 341 aa14.04□□□□□ -0.16
NUP54-217ENST00000514987 DEF8Q6ZN54 512 aa14.04□□□□□ -0.16
NUP54-217ENST00000514987 IL17RCQ8NAC3 791 aa14.04□□□□□ -0.16
NUP54-217ENST00000514987 SUN3Q8TAQ9 357 aa14.04□□□□□ -0.16
NUP54-217ENST00000514987 SLC22A18Q96BI1 424 aa14.04□□□□□ -0.16
NUP54-217ENST00000514987 OR2M4Q96R27 311 aa14.04□□□□□ -0.16
NUP54-217ENST00000514987 FUZQ9BT04 418 aa14.04□□□□□ -0.16
NUP54-217ENST00000514987 ROGDIQ9GZN7 287 aa14.04□□□□□ -0.16
NUP54-217ENST00000514987 SLIRPQ9GZT3 109 aaKnown RBP14.04□□□□□ -0.16
NUP54-217ENST00000514987 SERHL2Q9H4I8 314 aa14.04□□□□□ -0.16
NUP54-217ENST00000514987 TRIM45Q9H8W5 580 aaPredicted RBP14.04□□□□□ -0.16
NUP54-217ENST00000514987 CERS4Q9HA82 394 aa14.04□□□□□ -0.16
NUP54-217ENST00000514987 FZD3Q9NPG1 666 aa14.04□□□□□ -0.16
NUP54-217ENST00000514987 REV1Q9UBZ9 1251 aa14.04□□□□□ -0.16
NUP54-217ENST00000514987 LIPT1Q9Y234 373 aa14.04□□□□□ -0.16
NUP54-217ENST00000514987 YBX2Q9Y2T7 364 aaKnown RBP14.04□□□□□ -0.16
NUP54-217ENST00000514987 PCDHGA4Q9Y5G9 962 aa14.04□□□□□ -0.16
NUP54-217ENST00000514987 HEATR5BQ9P2D3 2071 aa14.03□□□□□ -0.16
NUP54-217ENST00000514987 TBC1D3DA0A087WVF3 549 aa14.03□□□□□ -0.16
NUP54-217ENST00000514987 TBC1D3IA0A087WXS9 549 aa14.03□□□□□ -0.16
NUP54-217ENST00000514987 TBC1D3EA0A087X179 549 aa14.03□□□□□ -0.16
NUP54-217ENST00000514987 TBC1D3KA0A087X1G2 549 aa14.03□□□□□ -0.16
NUP54-217ENST00000514987 TBC1D3FA6NER0 549 aaPredicted RBP14.03□□□□□ -0.16
NUP54-217ENST00000514987 TBC1D3LB9A6J9 549 aa14.03□□□□□ -0.16
NUP54-217ENST00000514987 HAT1O14929 419 aa14.03□□□□□ -0.16
NUP54-217ENST00000514987 AXIN1O15169 862 aa14.03□□□□□ -0.16
NUP54-217ENST00000514987 MAGEB3O15480 346 aa14.03□□□□□ -0.16
NUP54-217ENST00000514987 EMC8O43402 210 aa14.03□□□□□ -0.16
NUP54-217ENST00000514987 ASNA1O43681 348 aa14.03□□□□□ -0.16
NUP54-217ENST00000514987 OR10H3O60404 316 aa14.03□□□□□ -0.16
NUP54-217ENST00000514987 TBC1D3HP0C7X1 549 aa14.03□□□□□ -0.16
NUP54-217ENST00000514987 SLC15A1P46059 708 aa14.03□□□□□ -0.16
NUP54-217ENST00000514987 XKP51811 444 aa14.03□□□□□ -0.16
NUP54-217ENST00000514987 NUDT6P53370 316 aa14.03□□□□□ -0.16
NUP54-217ENST00000514987 ADPRHP54922 357 aa14.03□□□□□ -0.16
NUP54-217ENST00000514987 RPS15AP62244 130 aaKnown RBP14.03□□□□□ -0.16
NUP54-217ENST00000514987 INAQ16352 499 aa14.03□□□□□ -0.16
NUP54-217ENST00000514987 SYPL1Q16563 259 aa14.03□□□□□ -0.16
NUP54-217ENST00000514987 SYT16Q17RD7 645 aa14.03□□□□□ -0.16
NUP54-217ENST00000514987 C12orf73Q69YU5 71 aa14.03□□□□□ -0.16
NUP54-217ENST00000514987 TBC1D3GQ6DHY5 549 aa14.03□□□□□ -0.16
NUP54-217ENST00000514987 TBC1D3CQ6IPX1 549 aa14.03□□□□□ -0.16
NUP54-217ENST00000514987 ZNF425Q6IV72 752 aa14.03□□□□□ -0.16
NUP54-217ENST00000514987 SLC48A1Q6P1K1 146 aa14.03□□□□□ -0.16
NUP54-217ENST00000514987 SYCE2Q6PIF2 218 aa14.03□□□□□ -0.16
NUP54-217ENST00000514987 SZRD1Q7Z422 152 aa14.03□□□□□ -0.16
NUP54-217ENST00000514987 SAMD14Q8IZD0 417 aaPredicted RBP14.03□□□□□ -0.16
NUP54-217ENST00000514987 TBC1D3Q8IZP1 549 aaPredicted RBP14.03□□□□□ -0.16
NUP54-217ENST00000514987 AMER3Q8N944 861 aa14.03□□□□□ -0.16
NUP54-217ENST00000514987 MCFD2Q8NI22 146 aa14.03□□□□□ -0.16
NUP54-217ENST00000514987 FNDC11Q9BVV2 318 aa14.03□□□□□ -0.16
NUP54-217ENST00000514987 PINK1Q9BXM7 581 aa14.03□□□□□ -0.16
NUP54-217ENST00000514987 AICDAQ9GZX7 198 aa14.03□□□□□ -0.16
NUP54-217ENST00000514987 POLR2J3Q9H1A7 115 aaKnown RBP14.03□□□□□ -0.16
NUP54-217ENST00000514987 KLHL31Q9H511 634 aa14.03□□□□□ -0.16
NUP54-217ENST00000514987 SLC25A19Q9HC21 320 aa14.03□□□□□ -0.16
NUP54-217ENST00000514987 AMBNQ9NP70 447 aa14.03□□□□□ -0.16
NUP54-217ENST00000514987 RHBDL2Q9NX52 303 aa14.03□□□□□ -0.16
NUP54-217ENST00000514987 CCDC59Q9P031 241 aaKnown RBP14.03□□□□□ -0.16
NUP54-217ENST00000514987 NCKAP1Q9Y2A7 1128 aa14.03□□□□□ -0.16
NUP54-217ENST00000514987 A0A0G2JN53 185 aa14.02□□□□□ -0.16
NUP54-217ENST00000514987 A0A1W2PR48 441 aa14.02□□□□□ -0.16
NUP54-217ENST00000514987 PRR23AA6NEV1 266 aa14.02□□□□□ -0.16
NUP54-217ENST00000514987 OR52A4PA6NMU1 304 aa14.02□□□□□ -0.16
NUP54-217ENST00000514987 SYT5O00445 386 aa14.02□□□□□ -0.16
NUP54-217ENST00000514987 LGI1O95970 557 aa14.02□□□□□ -0.16
NUP54-217ENST00000514987 GSTM3P21266 225 aa14.02□□□□□ -0.16
NUP54-217ENST00000514987 GADD45AP24522 165 aa14.02□□□□□ -0.16
NUP54-217ENST00000514987 POU1F1P28069 291 aa14.02□□□□□ -0.16
NUP54-217ENST00000514987 ALDH4A1P30038 563 aa14.02□□□□□ -0.16
NUP54-217ENST00000514987 RGS6P49758 472 aa14.02□□□□□ -0.16
NUP54-217ENST00000514987 SEC13P55735 322 aa14.02□□□□□ -0.16
NUP54-217ENST00000514987 OCLNQ16625 522 aa14.02□□□□□ -0.16
NUP54-217ENST00000514987 TRIM16LQ309B1 348 aa14.02□□□□□ -0.16
NUP54-217ENST00000514987 ZNF404Q494X3 552 aa14.02□□□□□ -0.16
NUP54-217ENST00000514987 ARMCX4Q5H9R4 360 aa14.02□□□□□ -0.16
NUP54-217ENST00000514987 RNLSQ5VYX0 342 aa14.02□□□□□ -0.16
NUP54-217ENST00000514987 KIAA1211LQ6NV74 962 aa14.02□□□□□ -0.16
NUP54-217ENST00000514987 PGBD2Q6P3X8 592 aa14.02□□□□□ -0.16
NUP54-217ENST00000514987 PARM1Q6UWI2 310 aa14.02□□□□□ -0.16
NUP54-217ENST00000514987 MTSS1LQ765P7 747 aa14.02□□□□□ -0.16
NUP54-217ENST00000514987 ZBTB46Q86UZ6 589 aa14.02□□□□□ -0.16
NUP54-217ENST00000514987 AMIGO1Q86WK6 493 aa14.02□□□□□ -0.16
NUP54-217ENST00000514987 MFSD4AQ8N468 514 aa14.02□□□□□ -0.16
NUP54-217ENST00000514987 OR8J1Q8NGP2 316 aa14.02□□□□□ -0.16
NUP54-217ENST00000514987 OR8K5Q8NH50 307 aa14.02□□□□□ -0.16
NUP54-217ENST00000514987 VANGL1Q8TAA9 524 aaPredicted RBP14.02□□□□□ -0.16
NUP54-217ENST00000514987 KLHL6Q8WZ60 621 aa14.02□□□□□ -0.16
NUP54-217ENST00000514987 RPL3LQ92901 407 aaKnown RBP14.02□□□□□ -0.16
NUP54-217ENST00000514987 MROQ9BYG7 248 aa14.02□□□□□ -0.16
NUP54-217ENST00000514987 PRDM8Q9NQV8 689 aa14.02□□□□□ -0.16
NUP54-217ENST00000514987 SELENONQ9NZV5 590 aa14.02□□□□□ -0.16
NUP54-217ENST00000514987 A4GNTQ9UNA3 340 aa14.02□□□□□ -0.16
NUP54-217ENST00000514987 RPL36Q9Y3U8 105 aaKnown RBP14.02□□□□□ -0.16
NUP54-217ENST00000514987 PLEKHM1Q9Y4G2 1056 aa14.02□□□□□ -0.16
NUP54-217ENST00000514987 SNX11Q9Y5W9 270 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms