RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 PRORSD1PA6NEY8 169 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 CYR61O00622 381 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 PLPP1O14494 284 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 CTNSO60931 367 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 CDC123O75794 336 aaPredicted RBP7.8□□□□□ -1.16
CCL28-204ENST00000514421 SORBS2O94875 1100 aaKnown RBP7.8□□□□□ -1.16
CCL28-204ENST00000514421 SEMA3DO95025 777 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 ETHE1O95571 254 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 PDYNP01213 254 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 SERPINA7P05543 415 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 COX6A1P12074 109 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 HSD3B1P14060 373 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 SLC6A2P23975 617 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 HSD3B2P26439 372 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 CERS1P27544 350 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 IL12AP29459 219 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 TLX1P31314 330 aaPredicted RBP7.8□□□□□ -1.16
CCL28-204ENST00000514421 BSGP35613 385 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 VHLP40337 213 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 SSR2P43308 183 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 POLR2JP52435 117 aaKnown RBP7.8□□□□□ -1.16
CCL28-204ENST00000514421 HSD17B7P56937 341 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 OR4D2P58180 307 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 UFM1P61960 85 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 BTG2P78543 158 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 MS4A2Q01362 244 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 CSTF3Q12996 717 aaKnown RBP7.8□□□□□ -1.16
CCL28-204ENST00000514421 SLAMF1Q13291 335 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 MYBPC3Q14896 1274 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 PCOLCEQ15113 449 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 RPS6KA2Q15349 733 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 MMEL1Q495T6 779 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 RFTN2Q52LD8 501 aaPredicted RBP7.8□□□□□ -1.16
CCL28-204ENST00000514421 CYP20A1Q6UW02 462 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 ZNF793Q6ZN11 406 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 RNF111Q6ZNA4 994 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 LRRC74BQ6ZQY2 392 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 QSOX2Q6ZRP7 698 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 ANKRD37Q7Z713 158 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 GPR180Q86V85 440 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 PTRH1Q86Y79 214 aaKnown RBP7.8□□□□□ -1.16
CCL28-204ENST00000514421 KBTBD2Q8IY47 623 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 ZNF595Q8IYB9 648 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 ZCCHC7Q8N3Z6 543 aaKnown RBP7.8□□□□□ -1.16
CCL28-204ENST00000514421 FNDC5Q8NAU1 212 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 FDCSPQ8NFU4 85 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 DNAJB8Q8NHS0 232 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 NRG4Q8WWG1 115 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 LRRC58Q96CX6 371 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 IMMP1LQ96LU5 166 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 MAPKAP1Q9BPZ7 522 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 MESP1Q9BRJ9 268 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 TACO1Q9BSH4 297 aaKnown RBP7.8□□□□□ -1.16
CCL28-204ENST00000514421 ACPTQ9BZG2 426 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 SEMA4CQ9C0C4 833 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 LHPPQ9H008 270 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 MUC13Q9H3R2 512 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 BRF2Q9HAW0 419 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 ZNF160Q9HCG1 818 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 PRDM9Q9NQV7 894 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 ZNF71Q9NQZ8 489 aaPredicted RBP7.8□□□□□ -1.16
CCL28-204ENST00000514421 PRTFDC1Q9NRG1 225 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 C1orf109Q9NX04 203 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 SIRT5Q9NXA8 310 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 GPR83Q9NYM4 423 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 C6orf203Q9P0P8 240 aaPredicted RBP7.8□□□□□ -1.16
CCL28-204ENST00000514421 C5AR2Q9P296 337 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 LEF1Q9UJU2 399 aaPredicted RBP7.8□□□□□ -1.16
CCL28-204ENST00000514421 PCDHA9Q9Y5H5 950 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 NBEAQ8NFP9 2946 aa7.8□□□□□ -1.16
CCL28-204ENST00000514421 RP1L1Q8IWN7 2480 aaPredicted RBP7.79□□□□□ -1.16
CCL28-204ENST00000514421 C15orf38-AP3S2A0A0A6YYH1 394 aa7.79□□□□□ -1.16
CCL28-204ENST00000514421 PRSS51A0A1B0GVH4 220 aa7.79□□□□□ -1.16
CCL28-204ENST00000514421 TCRBV3S1A0A5B6 114 aa7.79□□□□□ -1.16
CCL28-204ENST00000514421 SYNDIG1LA6NDD5 238 aa7.79□□□□□ -1.16
CCL28-204ENST00000514421 MASP2O00187 686 aa7.79□□□□□ -1.16
CCL28-204ENST00000514421 NR5A2O00482 541 aa7.79□□□□□ -1.16
CCL28-204ENST00000514421 ANGPT2O15123 496 aa7.79□□□□□ -1.16
CCL28-204ENST00000514421 PROM1O43490 865 aa7.79□□□□□ -1.16
CCL28-204ENST00000514421 PEX1O43933 1283 aa7.79□□□□□ -1.16
CCL28-204ENST00000514421 DNAJA2O60884 412 aa7.79□□□□□ -1.16
CCL28-204ENST00000514421 G6PDP11413 515 aa7.79□□□□□ -1.16
CCL28-204ENST00000514421 PRPS2P11908 318 aa7.79□□□□□ -1.16
CCL28-204ENST00000514421 CPN2P22792 545 aa7.79□□□□□ -1.16
CCL28-204ENST00000514421 ITGA3P26006 1051 aa7.79□□□□□ -1.16
CCL28-204ENST00000514421 PGDP52209 483 aa7.79□□□□□ -1.16
CCL28-204ENST00000514421 EFNA3P52797 238 aa7.79□□□□□ -1.16
CCL28-204ENST00000514421 KCNK10P57789 538 aa7.79□□□□□ -1.16
CCL28-204ENST00000514421 EEF1A2Q05639 463 aaKnown RBP7.79□□□□□ -1.16
CCL28-204ENST00000514421 BIKQ13323 160 aa7.79□□□□□ -1.16
CCL28-204ENST00000514421 FLOT2Q14254 428 aa7.79□□□□□ -1.16
CCL28-204ENST00000514421 NR6A1Q15406 480 aa7.79□□□□□ -1.16
CCL28-204ENST00000514421 VPS26BQ4G0F5 336 aa7.79□□□□□ -1.16
CCL28-204ENST00000514421 SFT2D3Q587I9 215 aa7.79□□□□□ -1.16
CCL28-204ENST00000514421 C6orf10Q5SRN2 563 aa7.79□□□□□ -1.16
CCL28-204ENST00000514421 AGAP7PQ5VUJ5 663 aa7.79□□□□□ -1.16
CCL28-204ENST00000514421 IL23RQ5VWK5 629 aa7.79□□□□□ -1.16
CCL28-204ENST00000514421 MRM1Q6IN84 353 aaKnown RBP7.79□□□□□ -1.16
CCL28-204ENST00000514421 JMJD6Q6NYC1 403 aaPredicted RBP7.79□□□□□ -1.16
CCL28-204ENST00000514421 DLEU7Q6UYE1 221 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 135.5 ms