RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 RASSF1Q9NS23 344 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 EVA1BQ9NVM1 165 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 DHRS7Q9Y394 339 aa7.03□□□□□ -1.28
CLIP1-205ENST00000514271 METTL12A8MUP2 240 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 GPR89AB7ZAQ6 455 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 TBX1O43435 398 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 TPST1O60507 370 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 SEMA4FO95754 770 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 GPR89BP0CG08 455 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 HOXB1P14653 301 aaPredicted RBP7.02□□□□□ -1.29
CLIP1-205ENST00000514271 LHCGRP22888 699 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 PCGF2P35227 344 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 HAAOP46952 286 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 OR2B6P58173 313 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 YPEL5P62699 121 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 DAB2P98082 770 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 HOXC5Q00444 222 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 IL1RL1Q01638 556 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 RIPPLY1Q0D2K3 151 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 GALEQ14376 348 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 SEC23BQ15437 767 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 TAF1AQ15573 450 aaPredicted RBP7.02□□□□□ -1.29
CLIP1-205ENST00000514271 UGT8Q16880 541 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 ATXN7L2Q5T6C5 722 aaPredicted RBP7.02□□□□□ -1.29
CLIP1-205ENST00000514271 BHLHB9Q6PI77 547 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 KIAA1324Q6UXG2 1013 aaKnown RBP7.02□□□□□ -1.29
CLIP1-205ENST00000514271 CEACAM20Q6UY09 585 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 LDB1Q86U70 411 aaPredicted RBP7.02□□□□□ -1.29
CLIP1-205ENST00000514271 DNAAF3Q8N9W5 541 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 PRSS33Q8NF86 280 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 OR10A6Q8NH74 314 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 NCLNQ969V3 563 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 SCMH1Q96GD3 660 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 FYTTD1Q96QD9 318 aaKnown RBP7.02□□□□□ -1.29
CLIP1-205ENST00000514271 OR5M11Q96RB7 305 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 SEPHS2Q99611 448 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 UTP23Q9BRU9 249 aaKnown RBP7.02□□□□□ -1.29
CLIP1-205ENST00000514271 MKRN2Q9H000 416 aaKnown RBP7.02□□□□□ -1.29
CLIP1-205ENST00000514271 SMURF1Q9HCE7 757 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 RBM22Q9NW64 420 aaKnown RBP eCLIP7.02□□□□□ -1.29
CLIP1-205ENST00000514271 NUP50Q9UKX7 468 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 PI15O43692 258 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 ZNF821O75541 412 aaPredicted RBP7.02□□□□□ -1.29
CLIP1-205ENST00000514271 PDGFBP01127 241 aaPredicted RBP7.02□□□□□ -1.29
CLIP1-205ENST00000514271 SYPP08247 313 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 COL9A1P20849 921 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 CD27P26842 260 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 ALDH4A1P30038 563 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 AKT2P31751 481 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 VIPR1P32241 457 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 DCDC1P59894 354 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 DUOXA1Q1HG43 343 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 C18orf21Q32NC0 220 aaPredicted RBP7.02□□□□□ -1.29
CLIP1-205ENST00000514271 CRB2Q5IJ48 1285 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 OTUD3Q5T2D3 398 aaPredicted RBP7.02□□□□□ -1.29
CLIP1-205ENST00000514271 GPR139Q6DWJ6 353 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 ZNF619Q8N2I2 560 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 VWA5B2Q8N398 1253 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 NAXEQ8NCW5 288 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 CCNYQ8ND76 341 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 ZNF555Q8NEP9 628 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 PROX1Q92786 737 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 ERLEC1Q96DZ1 483 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 PPM1MQ96MI6 270 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 ZPBPQ9BS86 351 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 RUBCNLQ9H714 662 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 IL1RL2Q9HB29 575 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 CRLF2Q9HC73 371 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 RLIMQ9NVW2 624 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 ADPRHL2Q9NX46 363 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 DLGAP4Q9Y2H0 992 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 GPR52Q9Y2T5 361 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 CEP192Q8TEP8 1941 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 ALG1L2C9J202 215 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 LATO43561 262 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 AIREO43918 545 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 ADRB3P13945 408 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 ARSBP15848 533 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 KELP23276 732 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 FRKP42685 505 aaPredicted RBP7.02□□□□□ -1.29
CLIP1-205ENST00000514271 ASMTP46597 345 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 TPMTP51580 245 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 PER3P56645 1201 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 DSC2Q02487 901 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 CHRNB3Q05901 458 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 PTGR1Q14914 329 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 OCLNQ16625 522 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 LYSMD4Q5XG99 296 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 CCDC81Q6ZN84 652 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 DPY19L3Q6ZPD9 716 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 Q6ZVU0 165 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 KCTD20Q7Z5Y7 419 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 NR2C2APQ86WQ0 139 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 HORMAD1Q86X24 394 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 CBARPQ8N350 705 aaPredicted RBP7.02□□□□□ -1.29
CLIP1-205ENST00000514271 HDDC3Q8N4P3 179 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 NATD1Q8N6N6 113 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 TTC29Q8NA56 475 aaPredicted RBP7.02□□□□□ -1.29
CLIP1-205ENST00000514271 ATOH1Q92858 354 aaPredicted RBP7.02□□□□□ -1.29
CLIP1-205ENST00000514271 ZBED6CLQ96FA7 236 aaPredicted RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms