RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 EXD2Q9NVH0 621 aa14.07□□□□□ -0.16
VCAN-211ENST00000513984 NTMQ9P121 344 aa14.07□□□□□ -0.16
VCAN-211ENST00000513984 TRPC4Q9UBN4 977 aa14.07□□□□□ -0.16
VCAN-211ENST00000513984 TESMINQ9Y4I5 508 aa14.07□□□□□ -0.16
VCAN-211ENST00000513984 GPC6Q9Y625 555 aaPredicted RBP14.07□□□□□ -0.16
VCAN-211ENST00000513984 ENPP4Q9Y6X5 453 aa14.07□□□□□ -0.16
VCAN-211ENST00000513984 CACNA1IQ9P0X4 2223 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 A0A087WXM4 84 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 LMO7DNF2Z398 122 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 TNFRSF11BO00300 401 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 AQP9O43315 295 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 GALR3O60755 368 aaPredicted RBP14.06□□□□□ -0.16
VCAN-211ENST00000513984 IFNW1P05000 195 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 CDH2P19022 906 aaPredicted RBP14.06□□□□□ -0.16
VCAN-211ENST00000513984 CDH3P22223 829 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 CXCL12P48061 93 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 RPS6KA3P51812 740 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 PRKAG1P54619 331 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 VSX2P58304 361 aaPredicted RBP14.06□□□□□ -0.16
VCAN-211ENST00000513984 FUT5Q11128 374 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 CYP27C1Q4G0S4 372 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 ZNF691Q5VV52 312 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 PRSS41Q7RTY9 318 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 GPR32P1Q8NGA4 272 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 OR4K14Q8NGD5 310 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 XAGE5Q8WWM1 108 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 DNASE2BQ8WZ79 361 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 CCDC3Q9BQI4 270 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 FAM60AQ9NP50 221 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 TMEM74BQ9NUR3 256 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 KIF17Q9P2E2 1029 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 SH3GLB1Q9Y371 365 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 PCDHGA8Q9Y5G5 932 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 TNRC6BQ9UPQ9 1833 aaKnown RBP14.06□□□□□ -0.16
VCAN-211ENST00000513984 C19orf67A6NJJ6 358 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 STK25O00506 426 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 HCRTR1O43613 425 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 ASNA1O43681 348 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 DNAJB6O75190 326 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 UGT2B11O75310 529 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 FESP07332 822 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 NR2F1P10589 423 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 RHCEP18577 417 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 ALDH3B2P48448 385 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 KCNJ5P48544 419 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 CRISP3P54108 245 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 CDH15P55291 814 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 SPIBQ01892 262 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 GNA13Q14344 377 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 PUM1Q14671 1186 aaKnown RBP eCLIP14.06□□□□□ -0.16
VCAN-211ENST00000513984 PRAMEF8Q5VWM4 474 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 PRAMEF7Q5VXH5 474 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 USP53Q70EK8 1073 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 GALNT5Q7Z7M9 940 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 ARHGEF39Q8N4T4 335 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 ATG16L2Q8NAA4 619 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 NUP43Q8NFH3 380 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 BBS10Q8TAM1 723 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 ADAMTS16Q8TE57 1224 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 GIPC3Q8TF64 312 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 MYCBPQ99417 103 aaPredicted RBP14.06□□□□□ -0.16
VCAN-211ENST00000513984 PIP5K1AQ99755 562 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 RSPO3Q9BXY4 272 aaPredicted RBP14.06□□□□□ -0.16
VCAN-211ENST00000513984 ING2Q9H160 280 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 IL21RQ9HBE5 538 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 KRT84Q9NSB2 600 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 KCND3Q9UK17 655 aa14.06□□□□□ -0.16
VCAN-211ENST00000513984 SPTBP11277 2137 aa14.05□□□□□ -0.16
VCAN-211ENST00000513984 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.05□□□□□ -0.16
VCAN-211ENST00000513984 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.05□□□□□ -0.16
VCAN-211ENST00000513984 ZNF860A6NHJ4 632 aa14.05□□□□□ -0.16
VCAN-211ENST00000513984 A8MVJ9 347 aa14.05□□□□□ -0.16
VCAN-211ENST00000513984 E9PQ18 207 aa14.05□□□□□ -0.16
VCAN-211ENST00000513984 BCKDKO14874 412 aa14.05□□□□□ -0.16
VCAN-211ENST00000513984 SERPINB7O75635 380 aa14.05□□□□□ -0.16
VCAN-211ENST00000513984 PROS1P07225 676 aa14.05□□□□□ -0.16
VCAN-211ENST00000513984 ELK4P28324 431 aa14.05□□□□□ -0.16
VCAN-211ENST00000513984 RYKP34925 604 aa14.05□□□□□ -0.16
VCAN-211ENST00000513984 POLR2IP36954 125 aaKnown RBP14.05□□□□□ -0.16
VCAN-211ENST00000513984 LIMS1P48059 325 aa14.05□□□□□ -0.16
VCAN-211ENST00000513984 MAN2A2P49641 1150 aa14.05□□□□□ -0.16
VCAN-211ENST00000513984 XKP51811 444 aa14.05□□□□□ -0.16
VCAN-211ENST00000513984 HMGA2P52926 109 aa14.05□□□□□ -0.16
VCAN-211ENST00000513984 CDH12P55289 794 aa14.05□□□□□ -0.16
VCAN-211ENST00000513984 OLR1P78380 273 aa14.05□□□□□ -0.16
VCAN-211ENST00000513984 SIM1P81133 766 aaPredicted RBP14.05□□□□□ -0.16
VCAN-211ENST00000513984 KEAP1Q14145 624 aa14.05□□□□□ -0.16
VCAN-211ENST00000513984 LTB4RQ15722 352 aa14.05□□□□□ -0.16
VCAN-211ENST00000513984 OGFOD3Q6PK18 319 aa14.05□□□□□ -0.16
VCAN-211ENST00000513984 KRT73Q86Y46 540 aa14.05□□□□□ -0.16
VCAN-211ENST00000513984 TMEFF1Q8IYR6 380 aa14.05□□□□□ -0.16
VCAN-211ENST00000513984 FBLIM1Q8WUP2 373 aa14.05□□□□□ -0.16
VCAN-211ENST00000513984 HDAC2Q92769 488 aaKnown RBP14.05□□□□□ -0.16
VCAN-211ENST00000513984 PROX1Q92786 737 aa14.05□□□□□ -0.16
VCAN-211ENST00000513984 GIMAP5Q96F15 307 aa14.05□□□□□ -0.16
VCAN-211ENST00000513984 ZNF354BQ96LW1 612 aa14.05□□□□□ -0.16
VCAN-211ENST00000513984 COL21A1Q96P44 957 aa14.05□□□□□ -0.16
VCAN-211ENST00000513984 PSD2Q9BQI7 771 aa14.05□□□□□ -0.16
VCAN-211ENST00000513984 IER2Q9BTL4 223 aa14.05□□□□□ -0.16
VCAN-211ENST00000513984 BTBD2Q9BX70 525 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms