RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 SLC22A3O75751 556 aa10.55□□□□□ -0.72
HTT-213ENST00000513806 CPSF4O95639 269 aaKnown RBP10.55□□□□□ -0.72
HTT-213ENST00000513806 C6orf47O95873 294 aa10.55□□□□□ -0.72
HTT-213ENST00000513806 F10P00742 488 aa10.55□□□□□ -0.72
HTT-213ENST00000513806 IDO1P14902 403 aa10.55□□□□□ -0.72
HTT-213ENST00000513806 ITGA3P26006 1051 aa10.55□□□□□ -0.72
HTT-213ENST00000513806 NTSP30990 170 aa10.55□□□□□ -0.72
HTT-213ENST00000513806 MC3RP41968 323 aa10.55□□□□□ -0.72
HTT-213ENST00000513806 GSTM5P46439 218 aa10.55□□□□□ -0.72
HTT-213ENST00000513806 GPR143P51810 404 aa10.55□□□□□ -0.72
HTT-213ENST00000513806 UCNP55089 124 aa10.55□□□□□ -0.72
HTT-213ENST00000513806 GSTA3Q16772 222 aa10.55□□□□□ -0.72
HTT-213ENST00000513806 AGKQ53H12 422 aa10.55□□□□□ -0.72
HTT-213ENST00000513806 ZNF628Q5EBL2 1059 aa10.55□□□□□ -0.72
HTT-213ENST00000513806 WDR53Q7Z5U6 358 aaPredicted RBP10.55□□□□□ -0.72
HTT-213ENST00000513806 FUNDC1Q8IVP5 155 aa10.55□□□□□ -0.72
HTT-213ENST00000513806 APCDD1LQ8NCL9 501 aa10.55□□□□□ -0.72
HTT-213ENST00000513806 B3GNT7Q8NFL0 401 aa10.55□□□□□ -0.72
HTT-213ENST00000513806 OR7G2Q8NG99 324 aa10.55□□□□□ -0.72
HTT-213ENST00000513806 OR14A16Q8NHC5 309 aa10.55□□□□□ -0.72
HTT-213ENST00000513806 BRIX1Q8TDN6 353 aaKnown RBP10.55□□□□□ -0.72
HTT-213ENST00000513806 THAP4Q8WY91 577 aa10.55□□□□□ -0.72
HTT-213ENST00000513806 VPS33AQ96AX1 596 aa10.55□□□□□ -0.72
HTT-213ENST00000513806 COQ8BQ96D53 544 aa10.55□□□□□ -0.72
HTT-213ENST00000513806 SENP5Q96HI0 755 aaPredicted RBP10.55□□□□□ -0.72
HTT-213ENST00000513806 NPAS2Q99743 824 aa10.55□□□□□ -0.72
HTT-213ENST00000513806 TUBB6Q9BUF5 446 aa10.55□□□□□ -0.72
HTT-213ENST00000513806 DUSP26Q9BV47 211 aa10.55□□□□□ -0.72
HTT-213ENST00000513806 FAM117AQ9C073 453 aa10.55□□□□□ -0.72
HTT-213ENST00000513806 EPN3Q9H201 632 aa10.55□□□□□ -0.72
HTT-213ENST00000513806 CXorf21Q9HAI6 301 aa10.55□□□□□ -0.72
HTT-213ENST00000513806 ZBTB20Q9HC78 741 aaPredicted RBP10.55□□□□□ -0.72
HTT-213ENST00000513806 GIMAP4Q9NUV9 329 aa10.55□□□□□ -0.72
HTT-213ENST00000513806 EHD3Q9NZN3 535 aa10.55□□□□□ -0.72
HTT-213ENST00000513806 CCDC167Q9P0B6 97 aa10.55□□□□□ -0.72
HTT-213ENST00000513806 PSME2Q9UL46 239 aa10.55□□□□□ -0.72
HTT-213ENST00000513806 ERVK-11Q9UQG0 969 aa10.55□□□□□ -0.72
HTT-213ENST00000513806 DTX4Q9Y2E6 619 aa10.55□□□□□ -0.72
HTT-213ENST00000513806 A0A1W2PQ72 361 aa10.54□□□□□ -0.72
HTT-213ENST00000513806 NR5A2O00482 541 aa10.54□□□□□ -0.72
HTT-213ENST00000513806 SNX3O60493 162 aa10.54□□□□□ -0.72
HTT-213ENST00000513806 TBX19O60806 448 aa10.54□□□□□ -0.72
HTT-213ENST00000513806 SHOX2O60902 331 aaPredicted RBP10.54□□□□□ -0.72
HTT-213ENST00000513806 CBX7O95931 251 aa10.54□□□□□ -0.72
HTT-213ENST00000513806 CYC1P08574 325 aa10.54□□□□□ -0.72
HTT-213ENST00000513806 FAM87AP0C7U9 286 aa10.54□□□□□ -0.72
HTT-213ENST00000513806 S1PR1P21453 382 aa10.54□□□□□ -0.72
HTT-213ENST00000513806 GPC1P35052 558 aa10.54□□□□□ -0.72
HTT-213ENST00000513806 CDKN2CP42773 168 aa10.54□□□□□ -0.72
HTT-213ENST00000513806 POLR2JP52435 117 aaKnown RBP10.54□□□□□ -0.72
HTT-213ENST00000513806 MANFP55145 182 aaKnown RBP10.54□□□□□ -0.72
HTT-213ENST00000513806 CASP9P55211 416 aa10.54□□□□□ -0.72
HTT-213ENST00000513806 STX1BP61266 288 aa10.54□□□□□ -0.72
HTT-213ENST00000513806 SQLEQ14534 574 aa10.54□□□□□ -0.72
HTT-213ENST00000513806 CEBPEQ15744 281 aa10.54□□□□□ -0.72
HTT-213ENST00000513806 LINC00303Q3SY05 128 aa10.54□□□□□ -0.72
HTT-213ENST00000513806 TIGD2Q4W5G0 525 aa10.54□□□□□ -0.72
HTT-213ENST00000513806 CRTC2Q53ET0 693 aaPredicted RBP10.54□□□□□ -0.72
HTT-213ENST00000513806 COLEC12Q5KU26 742 aa10.54□□□□□ -0.72
HTT-213ENST00000513806 PLAG1Q6DJT9 500 aa10.54□□□□□ -0.72
HTT-213ENST00000513806 DNAJC14Q6Y2X3 702 aaPredicted RBP10.54□□□□□ -0.72
HTT-213ENST00000513806 SZRD1Q7Z422 152 aa10.54□□□□□ -0.72
HTT-213ENST00000513806 R3HCC1LQ7Z5L2 792 aaKnown RBP10.54□□□□□ -0.72
HTT-213ENST00000513806 CNTRLQ7Z7A1 2325 aa10.54□□□□□ -0.72
HTT-213ENST00000513806 GALNT12Q8IXK2 581 aa10.54□□□□□ -0.72
HTT-213ENST00000513806 C9orf40Q8IXQ3 194 aa10.54□□□□□ -0.72
HTT-213ENST00000513806 FAM9CQ8IZT9 166 aa10.54□□□□□ -0.72
HTT-213ENST00000513806 GALNT16Q8N428 558 aa10.54□□□□□ -0.72
HTT-213ENST00000513806 FDCSPQ8NFU4 85 aa10.54□□□□□ -0.72
HTT-213ENST00000513806 OR52R1Q8NGF1 315 aa10.54□□□□□ -0.72
HTT-213ENST00000513806 OR5AK3PQ8NH89 298 aa10.54□□□□□ -0.72
HTT-213ENST00000513806 PSMF1Q92530 271 aa10.54□□□□□ -0.72
HTT-213ENST00000513806 MTERF3Q96E29 417 aa10.54□□□□□ -0.72
HTT-213ENST00000513806 OTUB1Q96FW1 271 aaPredicted RBP10.54□□□□□ -0.72
HTT-213ENST00000513806 FER1L6-AS2Q96M78 137 aa10.54□□□□□ -0.72
HTT-213ENST00000513806 CCT8L2Q96SF2 557 aa10.54□□□□□ -0.72
HTT-213ENST00000513806 SIKE1Q9BRV8 207 aa10.54□□□□□ -0.72
HTT-213ENST00000513806 INPP5KQ9BT40 448 aa10.54□□□□□ -0.72
HTT-213ENST00000513806 NMUR2Q9GZQ4 415 aa10.54□□□□□ -0.72
HTT-213ENST00000513806 NSRP1Q9H0G5 558 aaKnown RBP10.54□□□□□ -0.72
HTT-213ENST00000513806 CXorf36Q9H7Y0 433 aa10.54□□□□□ -0.72
HTT-213ENST00000513806 ATP13A2Q9NQ11 1180 aa10.54□□□□□ -0.72
HTT-213ENST00000513806 SDR39U1Q9NRG7 319 aaPredicted RBP10.54□□□□□ -0.72
HTT-213ENST00000513806 SIRT3Q9NTG7 399 aaPredicted RBP10.54□□□□□ -0.72
HTT-213ENST00000513806 GPR83Q9NYM4 423 aa10.54□□□□□ -0.72
HTT-213ENST00000513806 TAS2R7Q9NYW3 318 aa10.54□□□□□ -0.72
HTT-213ENST00000513806 ZIM2Q9NZV7 527 aa10.54□□□□□ -0.72
HTT-213ENST00000513806 ARMCX1Q9P291 453 aa10.54□□□□□ -0.72
HTT-213ENST00000513806 PTGFRNQ9P2B2 879 aa10.54□□□□□ -0.72
HTT-213ENST00000513806 BCAP29Q9UHQ4 241 aa10.54□□□□□ -0.72
HTT-213ENST00000513806 WBP11Q9Y2W2 641 aaKnown RBP10.54□□□□□ -0.72
HTT-213ENST00000513806 A0A1W2PRB8 838 aa10.53□□□□□ -0.72
HTT-213ENST00000513806 ASPDHA6ND91 283 aa10.53□□□□□ -0.72
HTT-213ENST00000513806 TMEM200CA6NKL6 621 aa10.53□□□□□ -0.72
HTT-213ENST00000513806 CFLARO15519 480 aa10.53□□□□□ -0.72
HTT-213ENST00000513806 ZNF354AO60765 605 aaPredicted RBP10.53□□□□□ -0.72
HTT-213ENST00000513806 SCN2BO60939 215 aa10.53□□□□□ -0.72
HTT-213ENST00000513806 PDGFAP04085 211 aa10.53□□□□□ -0.72
HTT-213ENST00000513806 IGKV3-11P04433 115 aa10.53□□□□□ -0.72
HTT-213ENST00000513806 ATP1B1P05026 303 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms