RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 IL2RAP01589 272 aa11.55□□□□□ -0.56
VEGFA-216ENST00000512683 CELA3AP09093 270 aa11.55□□□□□ -0.56
VEGFA-216ENST00000512683 PCNAP12004 261 aa11.55□□□□□ -0.56
VEGFA-216ENST00000512683 NAGAP17050 411 aa11.55□□□□□ -0.56
VEGFA-216ENST00000512683 ECHS1P30084 290 aa11.55□□□□□ -0.56
VEGFA-216ENST00000512683 PIK3CGP48736 1102 aa11.55□□□□□ -0.56
VEGFA-216ENST00000512683 TMED10P49755 219 aaKnown RBP11.55□□□□□ -0.56
VEGFA-216ENST00000512683 ASCL1P50553 236 aa11.55□□□□□ -0.56
VEGFA-216ENST00000512683 SLC37A1P57057 533 aa11.55□□□□□ -0.56
VEGFA-216ENST00000512683 EEF1A1P68104 462 aaKnown RBP11.55□□□□□ -0.56
VEGFA-216ENST00000512683 TNFRSF17Q02223 184 aa11.55□□□□□ -0.56
VEGFA-216ENST00000512683 SETDB1Q15047 1291 aa11.55□□□□□ -0.56
VEGFA-216ENST00000512683 FLYWCH1Q4VC44 716 aa11.55□□□□□ -0.56
VEGFA-216ENST00000512683 EEF1A1P5Q5VTE0 462 aa11.55□□□□□ -0.56
VEGFA-216ENST00000512683 MRM1Q6IN84 353 aaKnown RBP11.55□□□□□ -0.56
VEGFA-216ENST00000512683 RNF111Q6ZNA4 994 aa11.55□□□□□ -0.56
VEGFA-216ENST00000512683 WDR53Q7Z5U6 358 aaPredicted RBP11.55□□□□□ -0.56
VEGFA-216ENST00000512683 OR4N5Q8IXE1 308 aa11.55□□□□□ -0.56
VEGFA-216ENST00000512683 RNF175Q8N4F7 328 aa11.55□□□□□ -0.56
VEGFA-216ENST00000512683 HUS1BQ8NHY5 278 aa11.55□□□□□ -0.56
VEGFA-216ENST00000512683 RIT1Q92963 219 aa11.55□□□□□ -0.56
VEGFA-216ENST00000512683 POM121Q96HA1 1249 aa11.55□□□□□ -0.56
VEGFA-216ENST00000512683 DOHHQ9BU89 302 aa11.55□□□□□ -0.56
VEGFA-216ENST00000512683 WWTR1Q9GZV5 400 aa11.55□□□□□ -0.56
VEGFA-216ENST00000512683 PROK2Q9HC23 129 aa11.55□□□□□ -0.56
VEGFA-216ENST00000512683 PRM3Q9NNZ6 103 aa11.55□□□□□ -0.56
VEGFA-216ENST00000512683 CCM2LQ9NUG4 571 aaPredicted RBP11.55□□□□□ -0.56
VEGFA-216ENST00000512683 ZNF358Q9NW07 568 aa11.55□□□□□ -0.56
VEGFA-216ENST00000512683 SPRR3Q9UBC9 169 aa11.55□□□□□ -0.56
VEGFA-216ENST00000512683 CNOT11Q9UKZ1 510 aaKnown RBP11.55□□□□□ -0.56
VEGFA-216ENST00000512683 TNPO3Q9Y5L0 923 aaKnown RBP11.55□□□□□ -0.56
VEGFA-216ENST00000512683 ITPR3Q14573 2671 aa11.55□□□□□ -0.56
VEGFA-216ENST00000512683 ANKHD1Q8IWZ3 2542 aaKnown RBP11.55□□□□□ -0.56
VEGFA-216ENST00000512683 MED13LQ71F56 2210 aa11.54□□□□□ -0.56
VEGFA-216ENST00000512683 A0A096LPK6 155 aa11.54□□□□□ -0.56
VEGFA-216ENST00000512683 MYOCOSA0A1B0GUC4 107 aa11.54□□□□□ -0.56
VEGFA-216ENST00000512683 LRRC14BA6NHZ5 514 aa11.54□□□□□ -0.56
VEGFA-216ENST00000512683 LRRC3CA6NJW4 275 aa11.54□□□□□ -0.56
VEGFA-216ENST00000512683 CD8B2A6NJW9 211 aa11.54□□□□□ -0.56
VEGFA-216ENST00000512683 A6NNC1 897 aa11.54□□□□□ -0.56
VEGFA-216ENST00000512683 KLHL2O95198 593 aa11.54□□□□□ -0.56
VEGFA-216ENST00000512683 IL18BPO95998 194 aa11.54□□□□□ -0.56
VEGFA-216ENST00000512683 HPNP05981 417 aa11.54□□□□□ -0.56
VEGFA-216ENST00000512683 RFPL3SP0C7P2 107 aa11.54□□□□□ -0.56
VEGFA-216ENST00000512683 ENDOUP21128 410 aaKnown RBP11.54□□□□□ -0.56
VEGFA-216ENST00000512683 ID2Q02363 134 aa11.54□□□□□ -0.56
VEGFA-216ENST00000512683 ZNF267Q14586 743 aaPredicted RBP11.54□□□□□ -0.56
VEGFA-216ENST00000512683 ACAP2Q15057 778 aa11.54□□□□□ -0.56
VEGFA-216ENST00000512683 EBPQ15125 230 aaKnown RBP11.54□□□□□ -0.56
VEGFA-216ENST00000512683 FAM83EQ2M2I3 478 aa11.54□□□□□ -0.56
VEGFA-216ENST00000512683 PACS2Q86VP3 889 aa11.54□□□□□ -0.56
VEGFA-216ENST00000512683 PLD6Q8N2A8 252 aaKnown RBP11.54□□□□□ -0.56
VEGFA-216ENST00000512683 TEX9Q8N6V9 391 aa11.54□□□□□ -0.56
VEGFA-216ENST00000512683 ZNF441Q8N8Z8 693 aa11.54□□□□□ -0.56
VEGFA-216ENST00000512683 PPWD1Q96BP3 646 aaKnown RBP11.54□□□□□ -0.56
VEGFA-216ENST00000512683 HSPBAP1Q96EW2 488 aa11.54□□□□□ -0.56
VEGFA-216ENST00000512683 RMND5BQ96G75 393 aaPredicted RBP11.54□□□□□ -0.56
VEGFA-216ENST00000512683 ZNF597Q96LX8 424 aa11.54□□□□□ -0.56
VEGFA-216ENST00000512683 TIMP4Q99727 224 aa11.54□□□□□ -0.56
VEGFA-216ENST00000512683 CNPPD1Q9BV87 410 aa11.54□□□□□ -0.56
VEGFA-216ENST00000512683 ANGPTL4Q9BY76 406 aa11.54□□□□□ -0.56
VEGFA-216ENST00000512683 PRDM14Q9GZV8 571 aa11.54□□□□□ -0.56
VEGFA-216ENST00000512683 OR51B5Q9H339 312 aa11.54□□□□□ -0.56
VEGFA-216ENST00000512683 CALHM2Q9HA72 323 aa11.54□□□□□ -0.56
VEGFA-216ENST00000512683 ASB4Q9Y574 426 aa11.54□□□□□ -0.56
VEGFA-216ENST00000512683 INTS1Q8N201 2190 aaKnown RBP11.54□□□□□ -0.56
VEGFA-216ENST00000512683 ABCA4P78363 2273 aa11.53□□□□□ -0.56
VEGFA-216ENST00000512683 C2orf92A0A1B0GVN3 265 aa11.53□□□□□ -0.56
VEGFA-216ENST00000512683 SAP18O00422 153 aaKnown RBP11.53□□□□□ -0.56
VEGFA-216ENST00000512683 PLPP1O14494 284 aa11.53□□□□□ -0.56
VEGFA-216ENST00000512683 SH3BGRLO75368 114 aa11.53□□□□□ -0.56
VEGFA-216ENST00000512683 SEMA3DO95025 777 aa11.53□□□□□ -0.56
VEGFA-216ENST00000512683 FAM58BPP0C7Q3 252 aa11.53□□□□□ -0.56
VEGFA-216ENST00000512683 EPXP11678 715 aa11.53□□□□□ -0.56
VEGFA-216ENST00000512683 KLK2P20151 261 aa11.53□□□□□ -0.56
VEGFA-216ENST00000512683 TYK2P29597 1187 aa11.53□□□□□ -0.56
VEGFA-216ENST00000512683 UQCRC1P31930 480 aa11.53□□□□□ -0.56
VEGFA-216ENST00000512683 PHBP35232 272 aa11.53□□□□□ -0.56
VEGFA-216ENST00000512683 OPRM1P35372 400 aa11.53□□□□□ -0.56
VEGFA-216ENST00000512683 MAGEA12P43365 314 aa11.53□□□□□ -0.56
VEGFA-216ENST00000512683 SERPINB8P50452 374 aa11.53□□□□□ -0.56
VEGFA-216ENST00000512683 CDK9P50750 372 aaKnown RBP11.53□□□□□ -0.56
VEGFA-216ENST00000512683 ALDH18A1P54886 795 aaKnown RBP11.53□□□□□ -0.56
VEGFA-216ENST00000512683 NRG3P56975 720 aa11.53□□□□□ -0.56
VEGFA-216ENST00000512683 HERVK_113P63132 956 aa11.53□□□□□ -0.56
VEGFA-216ENST00000512683 ERVK-8P63133 956 aa11.53□□□□□ -0.56
VEGFA-216ENST00000512683 SORDQ00796 357 aa11.53□□□□□ -0.56
VEGFA-216ENST00000512683 FUT7Q11130 342 aa11.53□□□□□ -0.56
VEGFA-216ENST00000512683 DUSP8Q13202 625 aa11.53□□□□□ -0.56
VEGFA-216ENST00000512683 RPS6KA2Q15349 733 aa11.53□□□□□ -0.56
VEGFA-216ENST00000512683 PCBP2Q15366 365 aaKnown RBP eCLIP11.53□□□□□ -0.561e-11■■□□□ 13
VEGFA-216ENST00000512683 UAP1Q16222 522 aaPredicted RBP11.53□□□□□ -0.56
VEGFA-216ENST00000512683 PFKFB4Q16877 469 aa11.53□□□□□ -0.56
VEGFA-216ENST00000512683 ACSF3Q4G176 576 aaPredicted RBP11.53□□□□□ -0.56
VEGFA-216ENST00000512683 TECRLQ5HYJ1 363 aa11.53□□□□□ -0.56
VEGFA-216ENST00000512683 HLA-DQA1Q5Y7H0 255 aa11.53□□□□□ -0.56
VEGFA-216ENST00000512683 NSUN5P2Q63ZY6 315 aa11.53□□□□□ -0.56
VEGFA-216ENST00000512683 VASNQ6EMK4 673 aa11.53□□□□□ -0.56
VEGFA-216ENST00000512683 TMEM81Q6P7N7 255 aa11.53□□□□□ -0.56
VEGFA-216ENST00000512683 CYP20A1Q6UW02 462 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms