RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 GBAP04062 536 aa13.52□□□□□ -0.25
CCHCR1-229ENST00000512418 CLPSP04118 112 aa13.52□□□□□ -0.25
CCHCR1-229ENST00000512418 ADH7P40394 386 aa13.52□□□□□ -0.25
CCHCR1-229ENST00000512418 SLC7A5Q01650 507 aa13.52□□□□□ -0.25
CCHCR1-229ENST00000512418 CKAP4Q07065 602 aaKnown RBP13.52□□□□□ -0.25
CCHCR1-229ENST00000512418 MYBPHQ13203 477 aa13.52□□□□□ -0.25
CCHCR1-229ENST00000512418 RPS6KA2Q15349 733 aa13.52□□□□□ -0.25
CCHCR1-229ENST00000512418 SLC25A35Q3KQZ1 300 aa13.52□□□□□ -0.25
CCHCR1-229ENST00000512418 C10orf62Q5T681 223 aaPredicted RBP13.52□□□□□ -0.25
CCHCR1-229ENST00000512418 CES4AQ5XG92 561 aa13.52□□□□□ -0.25
CCHCR1-229ENST00000512418 TMEM200AQ86VY9 491 aa13.52□□□□□ -0.25
CCHCR1-229ENST00000512418 GALNT12Q8IXK2 581 aa13.52□□□□□ -0.25
CCHCR1-229ENST00000512418 LIX1Q8N485 282 aa13.52□□□□□ -0.25
CCHCR1-229ENST00000512418 ZNF441Q8N8Z8 693 aa13.52□□□□□ -0.25
CCHCR1-229ENST00000512418 OR52B6Q8NGF0 335 aa13.52□□□□□ -0.25
CCHCR1-229ENST00000512418 NEIL3Q8TAT5 605 aa13.52□□□□□ -0.25
CCHCR1-229ENST00000512418 TP53INP1Q96A56 240 aa13.52□□□□□ -0.25
CCHCR1-229ENST00000512418 ZNF597Q96LX8 424 aa13.52□□□□□ -0.25
CCHCR1-229ENST00000512418 JSRP1Q96MG2 331 aaPredicted RBP13.52□□□□□ -0.25
CCHCR1-229ENST00000512418 CDK15Q96Q40 435 aa13.52□□□□□ -0.25
CCHCR1-229ENST00000512418 VPS11Q9H270 941 aa13.52□□□□□ -0.25
CCHCR1-229ENST00000512418 ACSS3Q9H6R3 686 aa13.52□□□□□ -0.25
CCHCR1-229ENST00000512418 NOL11Q9H8H0 719 aaKnown RBP13.52□□□□□ -0.25
CCHCR1-229ENST00000512418 CXorf21Q9HAI6 301 aa13.52□□□□□ -0.25
CCHCR1-229ENST00000512418 ZDHHC18Q9NUE0 388 aa13.52□□□□□ -0.25
CCHCR1-229ENST00000512418 ALKBH4Q9NXW9 302 aa13.52□□□□□ -0.25
CCHCR1-229ENST00000512418 CNOT11Q9UKZ1 510 aaKnown RBP13.52□□□□□ -0.25
CCHCR1-229ENST00000512418 NCKAP5O14513 1909 aa13.51□□□□□ -0.25
CCHCR1-229ENST00000512418 C2orf92A0A1B0GVN3 265 aa13.51□□□□□ -0.25
CCHCR1-229ENST00000512418 ANKRD33BA6NCL7 494 aa13.51□□□□□ -0.25
CCHCR1-229ENST00000512418 CAPN14A8MX76 684 aa13.51□□□□□ -0.25
CCHCR1-229ENST00000512418 OR7A17O14581 309 aa13.51□□□□□ -0.25
CCHCR1-229ENST00000512418 TP53I11O14683 189 aa13.51□□□□□ -0.25
CCHCR1-229ENST00000512418 PIK3R1P27986 724 aa13.51□□□□□ -0.25
CCHCR1-229ENST00000512418 SSTR4P31391 388 aa13.51□□□□□ -0.25
CCHCR1-229ENST00000512418 TMED10P49755 219 aaKnown RBP13.51□□□□□ -0.25
CCHCR1-229ENST00000512418 CCNG1P51959 295 aa13.51□□□□□ -0.25
CCHCR1-229ENST00000512418 RIPPLY2Q5TAB7 128 aa13.51□□□□□ -0.25
CCHCR1-229ENST00000512418 HLA-DQA1Q5Y7H0 255 aa13.51□□□□□ -0.25
CCHCR1-229ENST00000512418 FRG2Q64ET8 278 aa13.51□□□□□ -0.25
CCHCR1-229ENST00000512418 PLD6Q8N2A8 252 aaKnown RBP13.51□□□□□ -0.25
CCHCR1-229ENST00000512418 PTGR2Q8N8N7 351 aaPredicted RBP13.51□□□□□ -0.25
CCHCR1-229ENST00000512418 DIO2Q92813 273 aa13.51□□□□□ -0.25
CCHCR1-229ENST00000512418 UCN3Q969E3 161 aa13.51□□□□□ -0.25
CCHCR1-229ENST00000512418 ATP6V1E2Q96A05 226 aa13.51□□□□□ -0.25
CCHCR1-229ENST00000512418 PHF21BQ96EK2 531 aa13.51□□□□□ -0.25
CCHCR1-229ENST00000512418 FRG2BQ96QU4 278 aa13.51□□□□□ -0.25
CCHCR1-229ENST00000512418 SLC6A15Q9H2J7 730 aa13.51□□□□□ -0.25
CCHCR1-229ENST00000512418 TEX10Q9NXF1 929 aaPredicted RBP13.51□□□□□ -0.25
CCHCR1-229ENST00000512418 NINJ2Q9NZG7 142 aa13.51□□□□□ -0.25
CCHCR1-229ENST00000512418 TMCO1Q9UM00 188 aa13.51□□□□□ -0.25
CCHCR1-229ENST00000512418 SPG11Q96JI7 2443 aa13.5□□□□□ -0.25
CCHCR1-229ENST00000512418 C2CD3Q4AC94 2353 aa13.5□□□□□ -0.25
CCHCR1-229ENST00000512418 STX16-NPEPL1H3BU86 382 aa13.5□□□□□ -0.25
CCHCR1-229ENST00000512418 STX16O14662 325 aa13.5□□□□□ -0.25
CCHCR1-229ENST00000512418 PGRMC2O15173 223 aa13.5□□□□□ -0.25
CCHCR1-229ENST00000512418 TRIM3O75382 744 aaPredicted RBP13.5□□□□□ -0.25
CCHCR1-229ENST00000512418 LRATO95237 230 aa13.5□□□□□ -0.25
CCHCR1-229ENST00000512418 RBP1P09455 135 aa13.5□□□□□ -0.25
CCHCR1-229ENST00000512418 GDF1P27539 372 aa13.5□□□□□ -0.25
CCHCR1-229ENST00000512418 MAGEA12P43365 314 aa13.5□□□□□ -0.25
CCHCR1-229ENST00000512418 FUT7Q11130 342 aa13.5□□□□□ -0.25
CCHCR1-229ENST00000512418 C6orf163Q5TEZ5 329 aa13.5□□□□□ -0.25
CCHCR1-229ENST00000512418 TMEM198Q66K66 360 aa13.5□□□□□ -0.25
CCHCR1-229ENST00000512418 TTC19Q6DKK2 380 aaPredicted RBP13.5□□□□□ -0.25
CCHCR1-229ENST00000512418 PAGE2Q7Z2X7 111 aa13.5□□□□□ -0.25
CCHCR1-229ENST00000512418 WDR53Q7Z5U6 358 aaPredicted RBP13.5□□□□□ -0.25
CCHCR1-229ENST00000512418 RELL1Q8IUW5 271 aa13.5□□□□□ -0.25
CCHCR1-229ENST00000512418 LIX1LQ8IVB5 337 aa13.5□□□□□ -0.25
CCHCR1-229ENST00000512418 ULK2Q8IYT8 1036 aa13.5□□□□□ -0.25
CCHCR1-229ENST00000512418 C17orf53Q8N3J3 647 aaPredicted RBP13.5□□□□□ -0.25
CCHCR1-229ENST00000512418 OR4K14Q8NGD5 310 aa13.5□□□□□ -0.25
CCHCR1-229ENST00000512418 ISL2Q96A47 359 aa13.5□□□□□ -0.25
CCHCR1-229ENST00000512418 SECISBP2Q96T21 854 aaKnown RBP13.5□□□□□ -0.25
CCHCR1-229ENST00000512418 LRRC1Q9BTT6 524 aa13.5□□□□□ -0.25
CCHCR1-229ENST00000512418 NTMT1Q9BV86 223 aa13.5□□□□□ -0.25
CCHCR1-229ENST00000512418 AHSPQ9NZD4 102 aa13.5□□□□□ -0.25
CCHCR1-229ENST00000512418 XPR1Q9UBH6 696 aa13.5□□□□□ -0.25
CCHCR1-229ENST00000512418 MTRF1LQ9UGC7 380 aaKnown RBP13.5□□□□□ -0.25
CCHCR1-229ENST00000512418 ADAM29Q9UKF5 820 aa13.5□□□□□ -0.25
CCHCR1-229ENST00000512418 PCTPQ9UKL6 214 aa13.5□□□□□ -0.25
CCHCR1-229ENST00000512418 L3MBTL1Q9Y468 752 aa13.5□□□□□ -0.25
CCHCR1-229ENST00000512418 NPFFR2Q9Y5X5 522 aa13.5□□□□□ -0.25
CCHCR1-229ENST00000512418 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.5□□□□□ -0.25
CCHCR1-229ENST00000512418 NINQ8N4C6 2090 aa13.49□□□□□ -0.25
CCHCR1-229ENST00000512418 ARHGAP21Q5T5U3 1957 aa13.49□□□□□ -0.25
CCHCR1-229ENST00000512418 C15orf38-AP3S2A0A0A6YYH1 394 aa13.49□□□□□ -0.25
CCHCR1-229ENST00000512418 A0A1W2PS29 197 aa13.49□□□□□ -0.25
CCHCR1-229ENST00000512418 HSPB2A8KAH6 182 aa13.49□□□□□ -0.25
CCHCR1-229ENST00000512418 SNX4O95219 450 aa13.49□□□□□ -0.25
CCHCR1-229ENST00000512418 ZWINTO95229 277 aa13.49□□□□□ -0.25
CCHCR1-229ENST00000512418 KLK1P06870 262 aa13.49□□□□□ -0.25
CCHCR1-229ENST00000512418 INHBAP08476 426 aa13.49□□□□□ -0.25
CCHCR1-229ENST00000512418 CT62P0C5K7 136 aa13.49□□□□□ -0.25
CCHCR1-229ENST00000512418 TRPC1P48995 793 aa13.49□□□□□ -0.25
CCHCR1-229ENST00000512418 NRG3P56975 720 aa13.49□□□□□ -0.25
CCHCR1-229ENST00000512418 FBXW4P57775 412 aa13.49□□□□□ -0.25
CCHCR1-229ENST00000512418 IFT88Q13099 833 aa13.49□□□□□ -0.25
CCHCR1-229ENST00000512418 TRAF3Q13114 568 aa13.49□□□□□ -0.25
CCHCR1-229ENST00000512418 DUSP8Q13202 625 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms