RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 MIOSQ9NXC5 875 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 MRPL39Q9NYK5 338 aaKnown RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 ZNF282Q9UDV7 671 aaPredicted RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 FBXO9Q9UK97 447 aaPredicted RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 VANGL2Q9ULK5 521 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 PCDHGB6Q9Y5F9 930 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 N6AMT1Q9Y5N5 214 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 FAT4Q6V0I7 4981 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 LOC100653049A0A140TA62 436 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 OR2M5A3KFT3 312 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 LRIT2A6NDA9 550 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 ZSCAN5BA6NJL1 495 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 A6NL46 340 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 LSM1O15116 133 aaKnown RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 CD3EAPO15446 510 aaKnown RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 CLDN3O15551 220 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 FLRT2O43155 660 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 GPR39O43194 453 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 VEGFDO43915 354 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 KRT34O76011 436 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 SRP72O76094 671 aaKnown RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 SCELO95171 688 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 GCNT3O95395 438 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 NTN1O95631 604 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 GHRHP01286 108 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 EPOP01588 193 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 ANXA6P08133 673 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 ZNF35P13682 527 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 ATF6P18850 670 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 KDELR1P24390 212 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 RPL4P36578 427 aaKnown RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 IL12RB1P42701 662 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 AKR1D1P51857 326 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 PRKAG1P54619 331 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 CDKN2DP55273 166 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 CDH6P55285 790 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 ACTR1AP61163 376 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 TSPAN5P62079 268 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 EEF1A1P68104 462 aaKnown RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 DDX39BQ13838 428 aaKnown RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 UBAP2LQ14157 1087 aaKnown RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 EIF2B1Q14232 305 aaKnown RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 ARL6IP1Q15041 203 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 ZBED5Q49AG3 693 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 ATP13A5Q4VNC0 1218 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 PAN3Q58A45 887 aaKnown RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 EEF1A1P5Q5VTE0 462 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 RSBN1Q5VWQ0 802 aaPredicted RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 PPP2R2DQ66LE6 453 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 ZNF470Q6ECI4 717 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 TYW3Q6IPR3 259 aaKnown RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 PGBD2Q6P3X8 592 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 DARS2Q6PI48 645 aaKnown RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 PRR23BQ6ZRT6 265 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 ZSCAN2Q7Z7L9 614 aaPredicted RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 RTN4RL2Q86UN3 420 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 RFX6Q8HWS3 928 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 DHRSXQ8N5I4 330 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 EIF4E3Q8N5X7 224 aaKnown RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 TMEM145Q8NBT3 493 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 TTLQ8NG68 377 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 GPR32P1Q8NGA4 272 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 OR52L1Q8NGH7 329 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 OR56B2PQ8NGI1 322 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 GOT1L1Q8NHS2 421 aaPredicted RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 BRIX1Q8TDN6 353 aaKnown RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 PYROXD1Q8WU10 500 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 ASB15Q8WXK1 588 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 OVCA2Q8WZ82 227 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 SNAPC3Q92966 411 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 NXNL1Q96CM4 212 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 ISOC1Q96CN7 298 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 CXorf40BQ96DE9 158 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 SLC25A38Q96DW6 304 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 CMTM5Q96DZ9 223 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 MED8Q96G25 268 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 HSPA12BQ96MM6 686 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 PTCHD1Q96NR3 888 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 LRRC3BQ96PB8 259 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 LENG8Q96PV6 779 aaPredicted RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 AGAP2Q99490 1192 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 MND1Q9BWT6 205 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 GATA5Q9BWX5 397 aaPredicted RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 OSBPL11Q9BXB4 747 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 RSPH9Q9H1X1 276 aaPredicted RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 EHD1Q9H4M9 534 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 SLC32A1Q9H598 525 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 EGLN3Q9H6Z9 239 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 PLEKHA1Q9HB21 404 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 MAGEE1Q9HCI5 957 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 TMEM138Q9NPI0 162 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 HEBP1Q9NRV9 189 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 SOHLH2Q9NX45 425 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 ARMCX1Q9P291 453 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 TRMT6Q9UJA5 497 aaKnown RBP1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 A0A096LPK6 155 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 A0A0G2JPF8 293 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 DYTNA2CJ06 578 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 FAM47DPA6NHR8 397 aa1.56□□□□□ -2.16
TRAPPC13-211ENST00000512009 MIF4GDA9UHW6 222 aaKnown RBP1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms