RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 SH2D5Q6ZV89 423 aa10.52□□□□□ -0.72
RNF4-216ENST00000511859 GSTA5Q7RTV2 222 aa10.52□□□□□ -0.72
RNF4-216ENST00000511859 KRT78Q8N1N4 520 aa10.52□□□□□ -0.72
RNF4-216ENST00000511859 ANKRD9Q96BM1 317 aaPredicted RBP10.52□□□□□ -0.72
RNF4-216ENST00000511859 ZNF669Q96BR6 464 aaPredicted RBP10.52□□□□□ -0.72
RNF4-216ENST00000511859 FBXL20Q96IG2 436 aa10.52□□□□□ -0.72
RNF4-216ENST00000511859 FAM111AQ96PZ2 611 aa10.52□□□□□ -0.72
RNF4-216ENST00000511859 HS3ST6Q96QI5 342 aa10.52□□□□□ -0.72
RNF4-216ENST00000511859 SLC39A3Q9BRY0 314 aa10.52□□□□□ -0.72
RNF4-216ENST00000511859 AMBRA1Q9C0C7 1298 aa10.52□□□□□ -0.72
RNF4-216ENST00000511859 ROGDIQ9GZN7 287 aa10.52□□□□□ -0.72
RNF4-216ENST00000511859 DDX47Q9H0S4 455 aaKnown RBP10.52□□□□□ -0.72
RNF4-216ENST00000511859 NT5DC2Q9H857 520 aa10.52□□□□□ -0.72
RNF4-216ENST00000511859 PRDM7Q9NQW5 492 aa10.52□□□□□ -0.72
RNF4-216ENST00000511859 C20orf96Q9NUD7 363 aaPredicted RBP10.52□□□□□ -0.72
RNF4-216ENST00000511859 WWOXQ9NZC7 414 aa10.52□□□□□ -0.72
RNF4-216ENST00000511859 PRR14LQ5THK1 2151 aa10.52□□□□□ -0.72
RNF4-216ENST00000511859 GOLGA6L10A0A0M3HER8 536 aa10.52□□□□□ -0.73
RNF4-216ENST00000511859 C16orf97H3BN30 126 aa10.52□□□□□ -0.73
RNF4-216ENST00000511859 LRATO95237 230 aa10.52□□□□□ -0.73
RNF4-216ENST00000511859 LOXP28300 417 aaPredicted RBP10.52□□□□□ -0.73
RNF4-216ENST00000511859 THBS2P35442 1172 aa10.52□□□□□ -0.73
RNF4-216ENST00000511859 UGT2B10P36537 528 aa10.52□□□□□ -0.73
RNF4-216ENST00000511859 KCNC1P48547 511 aa10.52□□□□□ -0.73
RNF4-216ENST00000511859 IGLV3-21P80748 117 aaPredicted RBP10.52□□□□□ -0.73
RNF4-216ENST00000511859 MRPS25P82663 173 aaKnown RBP10.52□□□□□ -0.73
RNF4-216ENST00000511859 PCDH1Q08174 1060 aa10.52□□□□□ -0.73
RNF4-216ENST00000511859 VEZF1Q14119 521 aa10.52□□□□□ -0.73
RNF4-216ENST00000511859 TRIP13Q15645 432 aaPredicted RBP10.52□□□□□ -0.73
RNF4-216ENST00000511859 KRTAP24-1Q3LI83 254 aa10.52□□□□□ -0.73
RNF4-216ENST00000511859 TIGD3Q6B0B8 471 aa10.52□□□□□ -0.73
RNF4-216ENST00000511859 CCDC137Q6PK04 289 aaKnown RBP10.52□□□□□ -0.73
RNF4-216ENST00000511859 GCNT2Q8N0V5 402 aa10.52□□□□□ -0.73
RNF4-216ENST00000511859 SRFBP1Q8NEF9 429 aaKnown RBP10.52□□□□□ -0.73
RNF4-216ENST00000511859 FAM83FQ8NEG4 500 aaPredicted RBP10.52□□□□□ -0.73
RNF4-216ENST00000511859 SPPL2AQ8TCT8 520 aa10.52□□□□□ -0.73
RNF4-216ENST00000511859 TP53INP1Q96A56 240 aa10.52□□□□□ -0.73
RNF4-216ENST00000511859 TMEM41AQ96HV5 264 aa10.52□□□□□ -0.73
RNF4-216ENST00000511859 KCNC2Q96PR1 638 aa10.52□□□□□ -0.73
RNF4-216ENST00000511859 GAL3ST4Q96RP7 486 aa10.52□□□□□ -0.73
RNF4-216ENST00000511859 WWTR1Q9GZV5 400 aa10.52□□□□□ -0.73
RNF4-216ENST00000511859 PSD3Q9NYI0 1048 aa10.52□□□□□ -0.73
RNF4-216ENST00000511859 CDC42EP3Q9UKI2 254 aa10.52□□□□□ -0.73
RNF4-216ENST00000511859 YLPM1P49750 1951 aaKnown RBP10.51□□□□□ -0.73
RNF4-216ENST00000511859 A0A1W2PNV4 684 aa10.51□□□□□ -0.73
RNF4-216ENST00000511859 TCRBV7S3A2A0A539 114 aa10.51□□□□□ -0.73
RNF4-216ENST00000511859 LRRC14BA6NHZ5 514 aa10.51□□□□□ -0.73
RNF4-216ENST00000511859 OR6C76A6NM76 312 aa10.51□□□□□ -0.73
RNF4-216ENST00000511859 H0Y3Z8 333 aa10.51□□□□□ -0.73
RNF4-216ENST00000511859 SMNDC1O75940 238 aaKnown RBP eCLIP10.51□□□□□ -0.73
RNF4-216ENST00000511859 TBX6O95947 436 aaPredicted RBP10.51□□□□□ -0.73
RNF4-216ENST00000511859 MLNP12872 115 aa10.51□□□□□ -0.73
RNF4-216ENST00000511859 POU2F1P14859 743 aa10.51□□□□□ -0.73
RNF4-216ENST00000511859 PTPN6P29350 595 aa10.51□□□□□ -0.73
RNF4-216ENST00000511859 CASP3P42574 277 aa10.51□□□□□ -0.73
RNF4-216ENST00000511859 VPS41P49754 854 aa10.51□□□□□ -0.73
RNF4-216ENST00000511859 TMED10P49755 219 aaKnown RBP10.51□□□□□ -0.73
RNF4-216ENST00000511859 HNMTP50135 292 aa10.51□□□□□ -0.73
RNF4-216ENST00000511859 ID2Q02363 134 aa10.51□□□□□ -0.73
RNF4-216ENST00000511859 OR2A2Q6IF42 318 aa10.51□□□□□ -0.73
RNF4-216ENST00000511859 RNF111Q6ZNA4 994 aa10.51□□□□□ -0.73
RNF4-216ENST00000511859 SLCO4C1Q6ZQN7 724 aa10.51□□□□□ -0.73
RNF4-216ENST00000511859 ZNF611Q8N823 705 aa10.51□□□□□ -0.73
RNF4-216ENST00000511859 OR1J4Q8NGS1 313 aa10.51□□□□□ -0.73
RNF4-216ENST00000511859 CAVIN3Q969G5 261 aa10.51□□□□□ -0.73
RNF4-216ENST00000511859 STARD4Q96DR4 205 aa10.51□□□□□ -0.73
RNF4-216ENST00000511859 ZBED6CLQ96FA7 236 aaPredicted RBP10.51□□□□□ -0.73
RNF4-216ENST00000511859 TRMT61AQ96FX7 289 aaKnown RBP10.51□□□□□ -0.73
RNF4-216ENST00000511859 PDLIM5Q96HC4 596 aaKnown RBP10.51□□□□□ -0.73
RNF4-216ENST00000511859 KRT12Q99456 494 aa10.51□□□□□ -0.73
RNF4-216ENST00000511859 NDNQ99608 321 aa10.51□□□□□ -0.73
RNF4-216ENST00000511859 MAPKAP1Q9BPZ7 522 aa10.51□□□□□ -0.73
RNF4-216ENST00000511859 FAM167BQ9BTA0 163 aa10.51□□□□□ -0.73
RNF4-216ENST00000511859 CAPS2Q9BXY5 557 aa10.51□□□□□ -0.73
RNF4-216ENST00000511859 CLCF1Q9UBD9 225 aa10.51□□□□□ -0.73
RNF4-216ENST00000511859 PTBP2Q9UKA9 531 aaKnown RBP10.51□□□□□ -0.73
RNF4-216ENST00000511859 FREM1Q5H8C1 2179 aa10.5□□□□□ -0.73
RNF4-216ENST00000511859 HRKO00198 91 aa10.5□□□□□ -0.73
RNF4-216ENST00000511859 CDC7O00311 574 aa10.5□□□□□ -0.73
RNF4-216ENST00000511859 CDKN2DP55273 166 aa10.5□□□□□ -0.73
RNF4-216ENST00000511859 SLC37A1P57057 533 aa10.5□□□□□ -0.73
RNF4-216ENST00000511859 FBXW4P57775 412 aa10.5□□□□□ -0.73
RNF4-216ENST00000511859 PLIN5Q00G26 463 aa10.5□□□□□ -0.73
RNF4-216ENST00000511859 SRYQ05066 204 aa10.5□□□□□ -0.73
RNF4-216ENST00000511859 RUNX1T1Q06455 604 aa10.5□□□□□ -0.73
RNF4-216ENST00000511859 GPS1Q13098 491 aa10.5□□□□□ -0.73
RNF4-216ENST00000511859 PDAP1Q13442 181 aaKnown RBP10.5□□□□□ -0.73
RNF4-216ENST00000511859 SLBPQ14493 270 aaKnown RBP eCLIP10.5□□□□□ -0.73
RNF4-216ENST00000511859 EBPQ15125 230 aaKnown RBP10.5□□□□□ -0.73
RNF4-216ENST00000511859 CYP1B1Q16678 543 aa10.5□□□□□ -0.73
RNF4-216ENST00000511859 HSP90AA5PQ58FG0 334 aa10.5□□□□□ -0.73
RNF4-216ENST00000511859 BEX5Q5H9J7 111 aa10.5□□□□□ -0.73
RNF4-216ENST00000511859 BICRALQ6AI39 1079 aa10.5□□□□□ -0.73
RNF4-216ENST00000511859 ZNF474Q6S9Z5 364 aaPredicted RBP10.5□□□□□ -0.73
RNF4-216ENST00000511859 YRDCQ86U90 279 aaKnown RBP10.5□□□□□ -0.73
RNF4-216ENST00000511859 GRAMD2AQ8IUY3 354 aa10.5□□□□□ -0.73
RNF4-216ENST00000511859 BBOF1Q8ND07 529 aa10.5□□□□□ -0.73
RNF4-216ENST00000511859 SPATA4Q8NEY3 305 aa10.5□□□□□ -0.73
RNF4-216ENST00000511859 TANKQ92844 425 aa10.5□□□□□ -0.73
RNF4-216ENST00000511859 PPWD1Q96BP3 646 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms