RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 GPHA2Q96T91 129 aa6.17□□□□□ -1.42
COPS4-209ENST00000511653 NDNQ99608 321 aa6.17□□□□□ -1.42
COPS4-209ENST00000511653 VRK1Q99986 396 aaPredicted RBP6.17□□□□□ -1.42
COPS4-209ENST00000511653 AICDAQ9GZX7 198 aa6.17□□□□□ -1.42
COPS4-209ENST00000511653 TRIM45Q9H8W5 580 aaPredicted RBP6.17□□□□□ -1.42
COPS4-209ENST00000511653 NECTIN3Q9NQS3 549 aa6.17□□□□□ -1.42
COPS4-209ENST00000511653 COQ3Q9NZJ6 369 aa6.17□□□□□ -1.42
COPS4-209ENST00000511653 ZNF223Q9UK11 482 aaPredicted RBP6.17□□□□□ -1.42
COPS4-209ENST00000511653 GUCA1BQ9UMX6 200 aa6.17□□□□□ -1.42
COPS4-209ENST00000511653 SLC22A7Q9Y694 548 aa6.17□□□□□ -1.42
COPS4-209ENST00000511653 KIAA1549Q9HCM3 1950 aa6.17□□□□□ -1.42
COPS4-209ENST00000511653 DOCK7Q96N67 2140 aa6.17□□□□□ -1.42
COPS4-209ENST00000511653 IGKV3D-11A0A0A0MRZ8 115 aa6.17□□□□□ -1.42
COPS4-209ENST00000511653 TRBV11-1A0A0K0K1C0 115 aa6.17□□□□□ -1.42
COPS4-209ENST00000511653 FAM237BA0A1B0GVD1 139 aa6.17□□□□□ -1.42
COPS4-209ENST00000511653 A8MUA0 341 aa6.17□□□□□ -1.42
COPS4-209ENST00000511653 AP3B1O00203 1094 aa6.17□□□□□ -1.42
COPS4-209ENST00000511653 PRKNO60260 465 aaPredicted RBP6.17□□□□□ -1.42
COPS4-209ENST00000511653 CEP104O60308 925 aa6.17□□□□□ -1.42
COPS4-209ENST00000511653 TOXO94900 526 aa6.17□□□□□ -1.42
COPS4-209ENST00000511653 HAUS5O94927 633 aa6.17□□□□□ -1.42
COPS4-209ENST00000511653 SERPIND1P05546 499 aa6.17□□□□□ -1.42
COPS4-209ENST00000511653 NPPBP16860 134 aa6.17□□□□□ -1.42
COPS4-209ENST00000511653 ALOX12P18054 663 aa6.17□□□□□ -1.42
COPS4-209ENST00000511653 RHCEP18577 417 aa6.17□□□□□ -1.42
COPS4-209ENST00000511653 TFEBP19484 476 aa6.17□□□□□ -1.42
COPS4-209ENST00000511653 HRH2P25021 359 aa6.17□□□□□ -1.42
COPS4-209ENST00000511653 PPP2R1BP30154 601 aa6.17□□□□□ -1.42
COPS4-209ENST00000511653 MAGEA6P43360 314 aa6.17□□□□□ -1.42
COPS4-209ENST00000511653 HLCSP50747 726 aa6.17□□□□□ -1.42
COPS4-209ENST00000511653 RAB8AP61006 207 aa6.17□□□□□ -1.42
COPS4-209ENST00000511653 CDK16Q00536 496 aa6.17□□□□□ -1.42
COPS4-209ENST00000511653 GPS1Q13098 491 aa6.17□□□□□ -1.42
COPS4-209ENST00000511653 THOC5Q13769 683 aaKnown RBP6.17□□□□□ -1.42
COPS4-209ENST00000511653 HERC3Q15034 1050 aa6.17□□□□□ -1.42
COPS4-209ENST00000511653 C19orf54Q5BKX5 351 aa6.17□□□□□ -1.42
COPS4-209ENST00000511653 RBM20Q5T481 1227 aaKnown RBP6.17□□□□□ -1.42
COPS4-209ENST00000511653 TTC27Q6P3X3 843 aa6.17□□□□□ -1.42
COPS4-209ENST00000511653 LCTLQ6UWM7 567 aa6.17□□□□□ -1.42
COPS4-209ENST00000511653 C16orf47Q6ZP98 133 aaPredicted RBP6.17□□□□□ -1.42
COPS4-209ENST00000511653 QSOX2Q6ZRP7 698 aa6.17□□□□□ -1.42
COPS4-209ENST00000511653 CYP4Z2PQ8N1L4 340 aa6.17□□□□□ -1.42
COPS4-209ENST00000511653 PQLC1Q8N2U9 271 aa6.17□□□□□ -1.42
COPS4-209ENST00000511653 KLHL36Q8N4N3 616 aa6.17□□□□□ -1.42
COPS4-209ENST00000511653 ANKRD53Q8N9V6 530 aa6.17□□□□□ -1.42
COPS4-209ENST00000511653 APCDD1LQ8NCL9 501 aa6.17□□□□□ -1.42
COPS4-209ENST00000511653 OR52N2Q8NGI0 321 aa6.17□□□□□ -1.42
COPS4-209ENST00000511653 EEF1AKMT1Q8WVE0 214 aa6.17□□□□□ -1.42
COPS4-209ENST00000511653 GFM2Q969S9 779 aaKnown RBP6.17□□□□□ -1.42
COPS4-209ENST00000511653 SERPINB12Q96P63 405 aa6.17□□□□□ -1.42
COPS4-209ENST00000511653 OR4K3Q96R72 315 aa6.17□□□□□ -1.42
COPS4-209ENST00000511653 TSGA10Q9BZW7 698 aa6.17□□□□□ -1.42
COPS4-209ENST00000511653 CCDC68Q9H2F9 335 aa6.17□□□□□ -1.42
COPS4-209ENST00000511653 DEPPQ9NTK1 212 aa6.17□□□□□ -1.42
COPS4-209ENST00000511653 SLC17A6Q9P2U8 582 aa6.17□□□□□ -1.42
COPS4-209ENST00000511653 RNF114Q9Y508 228 aa6.17□□□□□ -1.42
COPS4-209ENST00000511653 ANK3Q12955 4377 aaKnown RBP6.16□□□□□ -1.42
COPS4-209ENST00000511653 RTTNQ86VV8 2226 aa6.16□□□□□ -1.42
COPS4-209ENST00000511653 EXPH5Q8NEV8 1989 aa6.16□□□□□ -1.42
COPS4-209ENST00000511653 OR1F1O43749 312 aa6.16□□□□□ -1.42
COPS4-209ENST00000511653 PEX1O43933 1283 aa6.16□□□□□ -1.42
COPS4-209ENST00000511653 ITGA10O75578 1167 aa6.16□□□□□ -1.42
COPS4-209ENST00000511653 PDE9AO76083 593 aa6.16□□□□□ -1.42
COPS4-209ENST00000511653 NADKO95544 446 aaPredicted RBP6.16□□□□□ -1.42
COPS4-209ENST00000511653 TSPAN15O95858 294 aa6.16□□□□□ -1.42
COPS4-209ENST00000511653 IL10P22301 178 aa6.16□□□□□ -1.42
COPS4-209ENST00000511653 JAK1P23458 1154 aa6.16□□□□□ -1.42
COPS4-209ENST00000511653 CHRNB4P30926 498 aa6.16□□□□□ -1.42
COPS4-209ENST00000511653 HNF4AP41235 474 aa6.16□□□□□ -1.42
COPS4-209ENST00000511653 MAGEA3P43357 314 aa6.16□□□□□ -1.42
COPS4-209ENST00000511653 HNRNPFP52597 415 aaKnown RBP6.16□□□□□ -1.42
COPS4-209ENST00000511653 SLURP1P55000 103 aa6.16□□□□□ -1.42
COPS4-209ENST00000511653 CDKN2DP55273 166 aa6.16□□□□□ -1.42
COPS4-209ENST00000511653 NUP107P57740 925 aa6.16□□□□□ -1.42
COPS4-209ENST00000511653 HSP90AA5PQ58FG0 334 aa6.16□□□□□ -1.42
COPS4-209ENST00000511653 PPP4R4Q6NUP7 873 aa6.16□□□□□ -1.42
COPS4-209ENST00000511653 C4orf22Q6V702 233 aa6.16□□□□□ -1.42
COPS4-209ENST00000511653 TMEM200AQ86VY9 491 aa6.16□□□□□ -1.42
COPS4-209ENST00000511653 RNF10Q8N5U6 811 aaKnown RBP6.16□□□□□ -1.42
COPS4-209ENST00000511653 LINC01356Q8N9X3 169 aa6.16□□□□□ -1.42
COPS4-209ENST00000511653 ZFP62Q8NB50 900 aaPredicted RBP6.16□□□□□ -1.42
COPS4-209ENST00000511653 POGLUT1Q8NBL1 392 aa6.16□□□□□ -1.42
COPS4-209ENST00000511653 ABHD11Q8NFV4 315 aa6.16□□□□□ -1.42
COPS4-209ENST00000511653 OR4K1Q8NGD4 311 aa6.16□□□□□ -1.42
COPS4-209ENST00000511653 LILRB4Q8NHJ6 448 aa6.16□□□□□ -1.42
COPS4-209ENST00000511653 C16orf52Q8NHV5 167 aa6.16□□□□□ -1.42
COPS4-209ENST00000511653 UTP15Q8TED0 518 aaKnown RBP6.16□□□□□ -1.42
COPS4-209ENST00000511653 TMEM125Q96AQ2 219 aa6.16□□□□□ -1.42
COPS4-209ENST00000511653 LINGO1Q96FE5 620 aa6.16□□□□□ -1.42
COPS4-209ENST00000511653 CLPTM1LQ96KA5 538 aa6.16□□□□□ -1.42
COPS4-209ENST00000511653 TSNARE1Q96NA8 513 aa6.16□□□□□ -1.42
COPS4-209ENST00000511653 DEFB126Q9BYW3 111 aa6.16□□□□□ -1.42
COPS4-209ENST00000511653 PCBD2Q9H0N5 130 aa6.16□□□□□ -1.42
COPS4-209ENST00000511653 OR10A2Q9H208 303 aa6.16□□□□□ -1.42
COPS4-209ENST00000511653 RHBGQ9H310 441 aa6.16□□□□□ -1.42
COPS4-209ENST00000511653 KLHL31Q9H511 634 aa6.16□□□□□ -1.42
COPS4-209ENST00000511653 PARVBQ9HBI1 364 aa6.16□□□□□ -1.42
COPS4-209ENST00000511653 C20orf96Q9NUD7 363 aaPredicted RBP6.16□□□□□ -1.42
COPS4-209ENST00000511653 TRMT6Q9UJA5 497 aaKnown RBP6.16□□□□□ -1.42
COPS4-209ENST00000511653 FBXO5Q9UKT4 447 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms