RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 FAM46DQ8NEK8 389 aa12.21□□□□□ -0.46
HMGB2-205ENST00000511316 NUDT8Q8WV74 236 aa12.21□□□□□ -0.46
HMGB2-205ENST00000511316 C11orf24Q96F05 449 aaPredicted RBP12.21□□□□□ -0.46
HMGB2-205ENST00000511316 KCNC2Q96PR1 638 aa12.21□□□□□ -0.46
HMGB2-205ENST00000511316 C1QTNF2Q9BXJ5 285 aa12.21□□□□□ -0.46
HMGB2-205ENST00000511316 MIR1-1HGQ9H1L0 117 aa12.21□□□□□ -0.46
HMGB2-205ENST00000511316 PCDH12Q9NPG4 1184 aa12.21□□□□□ -0.46
HMGB2-205ENST00000511316 POLE4Q9NR33 117 aa12.21□□□□□ -0.46
HMGB2-205ENST00000511316 GULP1Q9UBP9 304 aa12.21□□□□□ -0.46
HMGB2-205ENST00000511316 POU2F3Q9UKI9 436 aa12.21□□□□□ -0.46
HMGB2-205ENST00000511316 PLXNA2O75051 1894 aa12.2□□□□□ -0.46
HMGB2-205ENST00000511316 TRPM6Q9BX84 2022 aa12.2□□□□□ -0.46
HMGB2-205ENST00000511316 SPTBN2O15020 2390 aa12.2□□□□□ -0.46
HMGB2-205ENST00000511316 A0A1B0GVT2 93 aa12.2□□□□□ -0.46
HMGB2-205ENST00000511316 HMX3A6NHT5 357 aa12.2□□□□□ -0.46
HMGB2-205ENST00000511316 KIAA0513O60268 411 aa12.2□□□□□ -0.46
HMGB2-205ENST00000511316 LRATO95237 230 aa12.2□□□□□ -0.46
HMGB2-205ENST00000511316 C21orf33P30042 268 aaPredicted RBP12.2□□□□□ -0.46
HMGB2-205ENST00000511316 CSTF2P33240 577 aaKnown RBP eCLIP12.2□□□□□ -0.46
HMGB2-205ENST00000511316 POLR2LP62875 67 aaKnown RBP12.2□□□□□ -0.46
HMGB2-205ENST00000511316 SLC14A1Q13336 389 aa12.2□□□□□ -0.46
HMGB2-205ENST00000511316 NCF4Q15080 339 aa12.2□□□□□ -0.46
HMGB2-205ENST00000511316 PTPRRQ15256 657 aa12.2□□□□□ -0.46
HMGB2-205ENST00000511316 RSPO4Q2I0M5 234 aaPredicted RBP12.2□□□□□ -0.46
HMGB2-205ENST00000511316 TMEM201Q5SNT2 666 aa12.2□□□□□ -0.46
HMGB2-205ENST00000511316 STPG1Q5TH74 334 aa12.2□□□□□ -0.46
HMGB2-205ENST00000511316 ZNF517Q6ZMY9 492 aaPredicted RBP12.2□□□□□ -0.46
HMGB2-205ENST00000511316 SNX29P2Q8IUI4 249 aa12.2□□□□□ -0.46
HMGB2-205ENST00000511316 RASGRP3Q8IV61 690 aa12.2□□□□□ -0.46
HMGB2-205ENST00000511316 LINC00471Q8N535 108 aa12.2□□□□□ -0.46
HMGB2-205ENST00000511316 ASCC1Q8N9N2 400 aaKnown RBP12.2□□□□□ -0.46
HMGB2-205ENST00000511316 OR6F1Q8NGZ6 308 aa12.2□□□□□ -0.46
HMGB2-205ENST00000511316 AP3S1Q92572 193 aa12.2□□□□□ -0.46
HMGB2-205ENST00000511316 KLK6Q92876 244 aa12.2□□□□□ -0.46
HMGB2-205ENST00000511316 BMFQ96LC9 184 aa12.2□□□□□ -0.46
HMGB2-205ENST00000511316 SLC6A18Q96N87 628 aa12.2□□□□□ -0.46
HMGB2-205ENST00000511316 TEFMQ96QE5 360 aaKnown RBP12.2□□□□□ -0.46
HMGB2-205ENST00000511316 MCCC1Q96RQ3 725 aaPredicted RBP12.2□□□□□ -0.46
HMGB2-205ENST00000511316 CHCHD6Q9BRQ6 235 aa12.2□□□□□ -0.46
HMGB2-205ENST00000511316 YIPF2Q9BWQ6 316 aa12.2□□□□□ -0.46
HMGB2-205ENST00000511316 MND1Q9BWT6 205 aa12.2□□□□□ -0.46
HMGB2-205ENST00000511316 SLC22A4Q9H015 551 aa12.2□□□□□ -0.46
HMGB2-205ENST00000511316 IL21RQ9HBE5 538 aa12.2□□□□□ -0.46
HMGB2-205ENST00000511316 SMURF1Q9HCE7 757 aa12.2□□□□□ -0.46
HMGB2-205ENST00000511316 NDOR1Q9UHB4 597 aa12.2□□□□□ -0.46
HMGB2-205ENST00000511316 TSR3Q9UJK0 312 aaKnown RBP12.2□□□□□ -0.46
HMGB2-205ENST00000511316 CA5BQ9Y2D0 317 aa12.2□□□□□ -0.46
HMGB2-205ENST00000511316 RPL36Q9Y3U8 105 aaKnown RBP12.2□□□□□ -0.46
HMGB2-205ENST00000511316 PCNX2A6NKB5 2137 aa12.19□□□□□ -0.46
HMGB2-205ENST00000511316 ZAR1LA6NP61 321 aa12.19□□□□□ -0.46
HMGB2-205ENST00000511316 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.19□□□□□ -0.46
HMGB2-205ENST00000511316 H0Y8X5 98 aa12.19□□□□□ -0.46
HMGB2-205ENST00000511316 PSMD11O00231 422 aa12.19□□□□□ -0.46
HMGB2-205ENST00000511316 PDE9AO76083 593 aa12.19□□□□□ -0.46
HMGB2-205ENST00000511316 CLDN7O95471 211 aa12.19□□□□□ -0.46
HMGB2-205ENST00000511316 PAK4O96013 591 aaPredicted RBP12.19□□□□□ -0.46
HMGB2-205ENST00000511316 STSP08842 583 aa12.19□□□□□ -0.46
HMGB2-205ENST00000511316 ZNF30P17039 623 aa12.19□□□□□ -0.46
HMGB2-205ENST00000511316 CHMP24386 653 aa12.19□□□□□ -0.46
HMGB2-205ENST00000511316 PTBP1P26599 531 aaKnown RBP eCLIP12.19□□□□□ -0.46
HMGB2-205ENST00000511316 CCR7P32248 378 aa12.19□□□□□ -0.46
HMGB2-205ENST00000511316 CA5AP35218 305 aa12.19□□□□□ -0.46
HMGB2-205ENST00000511316 SLC19A1P41440 591 aa12.19□□□□□ -0.46
HMGB2-205ENST00000511316 AFF3P51826 1226 aaKnown RBP12.19□□□□□ -0.46
HMGB2-205ENST00000511316 DCDC1P59894 354 aa12.19□□□□□ -0.46
HMGB2-205ENST00000511316 MRPS15P82914 257 aaKnown RBP12.19□□□□□ -0.46
HMGB2-205ENST00000511316 E2F2Q14209 437 aa12.19□□□□□ -0.46
HMGB2-205ENST00000511316 LAPTM4AQ15012 233 aa12.19□□□□□ -0.46
HMGB2-205ENST00000511316 XKR6Q5GH73 641 aa12.19□□□□□ -0.46
HMGB2-205ENST00000511316 TMPRSS11AQ6ZMR5 421 aa12.19□□□□□ -0.46
HMGB2-205ENST00000511316 DBX2Q6ZNG2 339 aa12.19□□□□□ -0.46
HMGB2-205ENST00000511316 IKBIPQ70UQ0 350 aa12.19□□□□□ -0.46
HMGB2-205ENST00000511316 CLDN22Q8N7P3 220 aa12.19□□□□□ -0.46
HMGB2-205ENST00000511316 GDPD1Q8N9F7 314 aa12.19□□□□□ -0.46
HMGB2-205ENST00000511316 SKA2Q8WVK7 121 aaPredicted RBP12.19□□□□□ -0.46
HMGB2-205ENST00000511316 KLHL6Q8WZ60 621 aa12.19□□□□□ -0.46
HMGB2-205ENST00000511316 RAB7BQ96AH8 199 aa12.19□□□□□ -0.46
HMGB2-205ENST00000511316 TAPBPLQ9BX59 468 aa12.19□□□□□ -0.46
HMGB2-205ENST00000511316 TP63Q9H3D4 680 aaPredicted RBP12.19□□□□□ -0.46
HMGB2-205ENST00000511316 RMI1Q9H9A7 625 aa12.19□□□□□ -0.46
HMGB2-205ENST00000511316 ZNF226Q9NYT6 803 aa12.19□□□□□ -0.46
HMGB2-205ENST00000511316 NFKBIL1Q9UBC1 381 aaPredicted RBP12.19□□□□□ -0.46
HMGB2-205ENST00000511316 PHF11Q9UIL8 331 aa12.19□□□□□ -0.46
HMGB2-205ENST00000511316 MGAT4BQ9UQ53 548 aa12.19□□□□□ -0.46
HMGB2-205ENST00000511316 ENPP4Q9Y6X5 453 aa12.19□□□□□ -0.46
HMGB2-205ENST00000511316 BPTFQ12830 3046 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 IGLON5A6NGN9 336 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 SNTNA6NMZ2 147 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 C4orf47A7E2U8 309 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 SLC30A4O14863 429 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 SLC31A1O15431 190 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 SCO2O43819 266 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 TNFRSF21O75509 655 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 DIRAS1O95057 198 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 CATP04040 527 aaKnown RBP12.18□□□□□ -0.46
HMGB2-205ENST00000511316 CFIP05156 583 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 YES1P07947 543 aa12.18□□□□□ -0.46
HMGB2-205ENST00000511316 ANXA4P09525 319 aaPredicted RBP12.18□□□□□ -0.46
HMGB2-205ENST00000511316 ATP1B2P14415 290 aaPredicted RBP12.18□□□□□ -0.46
HMGB2-205ENST00000511316 EPHA2P29317 976 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms