RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 MANEAQ5SRI9 462 aa4.68□□□□□ -1.66
NEK1-204ENST00000509912 B3GNT6Q6ZMB0 384 aa4.68□□□□□ -1.66
NEK1-204ENST00000509912 EFL1Q7Z2Z2 1120 aaKnown RBP4.68□□□□□ -1.66
NEK1-204ENST00000509912 SMYD1Q8NB12 490 aa4.68□□□□□ -1.66
NEK1-204ENST00000509912 ARRDC2Q8TBH0 407 aa4.68□□□□□ -1.66
NEK1-204ENST00000509912 SUN5Q8TC36 379 aa4.68□□□□□ -1.66
NEK1-204ENST00000509912 FAM172AQ8WUF8 416 aa4.68□□□□□ -1.66
NEK1-204ENST00000509912 RND1Q92730 232 aa4.68□□□□□ -1.66
NEK1-204ENST00000509912 KLK6Q92876 244 aa4.68□□□□□ -1.66
NEK1-204ENST00000509912 SGF29Q96ES7 293 aa4.68□□□□□ -1.66
NEK1-204ENST00000509912 RITA1Q96K30 269 aa4.68□□□□□ -1.66
NEK1-204ENST00000509912 RUFY1Q96T51 708 aa4.68□□□□□ -1.66
NEK1-204ENST00000509912 LRRC61Q9BV99 259 aa4.68□□□□□ -1.66
NEK1-204ENST00000509912 POLR1EQ9GZS1 481 aaKnown RBP4.68□□□□□ -1.66
NEK1-204ENST00000509912 SEBOXQ9HB31 216 aaPredicted RBP4.68□□□□□ -1.66
NEK1-204ENST00000509912 FZD3Q9NPG1 666 aa4.68□□□□□ -1.66
NEK1-204ENST00000509912 NRIP3Q9NQ35 241 aa4.68□□□□□ -1.66
NEK1-204ENST00000509912 OLAHQ9NV23 265 aa4.68□□□□□ -1.66
NEK1-204ENST00000509912 QPCTLQ9NXS2 382 aa4.68□□□□□ -1.66
NEK1-204ENST00000509912 COL6A6A6NMZ7 2263 aa4.67□□□□□ -1.66
NEK1-204ENST00000509912 FAM25EA8MYX2 175 aa4.67□□□□□ -1.66
NEK1-204ENST00000509912 FAM157AC9JC47 383 aa4.67□□□□□ -1.66
NEK1-204ENST00000509912 KMOO15229 486 aa4.67□□□□□ -1.66
NEK1-204ENST00000509912 ST8SIA3O43173 380 aa4.67□□□□□ -1.66
NEK1-204ENST00000509912 SLC28A2O43868 658 aa4.67□□□□□ -1.66
NEK1-204ENST00000509912 KERAO60938 352 aa4.67□□□□□ -1.66
NEK1-204ENST00000509912 KIAA0754O94854 1291 aa4.67□□□□□ -1.66
NEK1-204ENST00000509912 CPNE6O95741 557 aa4.67□□□□□ -1.66
NEK1-204ENST00000509912 IFI6P09912 130 aa4.67□□□□□ -1.66
NEK1-204ENST00000509912 KRT5P13647 590 aa4.67□□□□□ -1.66
NEK1-204ENST00000509912 IL10P22301 178 aa4.67□□□□□ -1.66
NEK1-204ENST00000509912 USP8P40818 1118 aa4.67□□□□□ -1.66
NEK1-204ENST00000509912 PDK1Q15118 436 aa4.67□□□□□ -1.66
NEK1-204ENST00000509912 SLC5A12Q1EHB4 618 aa4.67□□□□□ -1.66
NEK1-204ENST00000509912 WSCD2Q2TBF2 565 aa4.67□□□□□ -1.66
NEK1-204ENST00000509912 CAMK1DQ8IU85 385 aa4.67□□□□□ -1.66
NEK1-204ENST00000509912 CNGA4Q8IV77 575 aa4.67□□□□□ -1.66
NEK1-204ENST00000509912 RCOR2Q8IZ40 523 aa4.67□□□□□ -1.66
NEK1-204ENST00000509912 ROBO4Q8WZ75 1007 aa4.67□□□□□ -1.66
NEK1-204ENST00000509912 MR1Q95460 341 aa4.67□□□□□ -1.66
NEK1-204ENST00000509912 CCNL2Q96S94 520 aaPredicted RBP4.67□□□□□ -1.66
NEK1-204ENST00000509912 CHP1Q99653 195 aa4.67□□□□□ -1.66
NEK1-204ENST00000509912 KIR3DX1Q9H7L2 352 aa4.67□□□□□ -1.66
NEK1-204ENST00000509912 LZTFL1Q9NQ48 299 aa4.67□□□□□ -1.66
NEK1-204ENST00000509912 KLHL13Q9P2N7 655 aa4.67□□□□□ -1.66
NEK1-204ENST00000509912 FETUBQ9UGM5 382 aa4.67□□□□□ -1.66
NEK1-204ENST00000509912 IPO11Q9UI26 975 aaKnown RBP4.67□□□□□ -1.66
NEK1-204ENST00000509912 SATB2Q9UPW6 733 aa4.67□□□□□ -1.66
NEK1-204ENST00000509912 A6NNC1 897 aa4.67□□□□□ -1.66
NEK1-204ENST00000509912 PRPF4O43172 522 aaKnown RBP eCLIP4.67□□□□□ -1.66
NEK1-204ENST00000509912 ZSCAN12O43309 604 aa4.67□□□□□ -1.66
NEK1-204ENST00000509912 SOD1P00441 154 aa4.67□□□□□ -1.66
NEK1-204ENST00000509912 CALCAP01258 141 aa4.67□□□□□ -1.66
NEK1-204ENST00000509912 RPS3P23396 243 aaKnown RBP eCLIP4.67□□□□□ -1.66
NEK1-204ENST00000509912 TNFRSF8P28908 595 aa4.67□□□□□ -1.66
NEK1-204ENST00000509912 NME5P56597 212 aa4.67□□□□□ -1.66
NEK1-204ENST00000509912 MSLNQ13421 630 aaPredicted RBP4.67□□□□□ -1.66
NEK1-204ENST00000509912 PTK6Q13882 451 aa4.67□□□□□ -1.66
NEK1-204ENST00000509912 LY6DQ14210 128 aa4.67□□□□□ -1.66
NEK1-204ENST00000509912 PTPRRQ15256 657 aa4.67□□□□□ -1.66
NEK1-204ENST00000509912 LINC00303Q3SY05 128 aa4.67□□□□□ -1.66
NEK1-204ENST00000509912 TTC23LQ6PF05 361 aa4.67□□□□□ -1.66
NEK1-204ENST00000509912 IYDQ6PHW0 289 aa4.67□□□□□ -1.66
NEK1-204ENST00000509912 KIRREL3Q8IZU9 778 aa4.67□□□□□ -1.66
NEK1-204ENST00000509912 RNF10Q8N5U6 811 aaKnown RBP4.67□□□□□ -1.66
NEK1-204ENST00000509912 ARFGAP1Q8N6T3 406 aa4.67□□□□□ -1.66
NEK1-204ENST00000509912 OR52K2Q8NGK3 314 aa4.67□□□□□ -1.66
NEK1-204ENST00000509912 EXD1Q8NHP7 514 aa4.67□□□□□ -1.66
NEK1-204ENST00000509912 FAM76AQ8TAV0 307 aa4.67□□□□□ -1.66
NEK1-204ENST00000509912 ST7LQ8TDW4 575 aa4.67□□□□□ -1.66
NEK1-204ENST00000509912 PTP4A1Q93096 173 aa4.67□□□□□ -1.66
NEK1-204ENST00000509912 HMCESQ96FZ2 354 aa4.67□□□□□ -1.66
NEK1-204ENST00000509912 CARD6Q9BX69 1037 aa4.67□□□□□ -1.66
NEK1-204ENST00000509912 TDRD1Q9BXT4 1180 aaKnown RBP4.67□□□□□ -1.66
NEK1-204ENST00000509912 COPS7BQ9H9Q2 264 aaPredicted RBP4.67□□□□□ -1.66
NEK1-204ENST00000509912 PSD3Q9NYI0 1048 aa4.67□□□□□ -1.66
NEK1-204ENST00000509912 LRIT1Q9P2V4 623 aa4.67□□□□□ -1.66
NEK1-204ENST00000509912 CRNNQ9UBG3 495 aaPredicted RBP4.67□□□□□ -1.66
NEK1-204ENST00000509912 A3GALT2U3KPV4 340 aa4.67□□□□□ -1.66
NEK1-204ENST00000509912 ASXL3Q9C0F0 2248 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 SYNJ2BP-COX16A0A087WUM0 186 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 EEF2KO00418 725 aaKnown RBP4.66□□□□□ -1.66
NEK1-204ENST00000509912 POLR3GO15318 223 aaPredicted RBP4.66□□□□□ -1.66
NEK1-204ENST00000509912 ACSL3O95573 720 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 QDPRP09417 244 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 PCNAP12004 261 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 ZNF182P17025 639 aaPredicted RBP4.66□□□□□ -1.66
NEK1-204ENST00000509912 CTPS1P17812 591 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 CD1CP29017 333 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 UGT1A5P35504 534 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 PNLIPRP2P54317 469 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 PITX1P78337 314 aaPredicted RBP4.66□□□□□ -1.66
NEK1-204ENST00000509912 CDK16Q00536 496 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 GPS2Q13227 327 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 ITPR1Q14643 2758 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 IRF4Q15306 451 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 LRRC23Q53EV4 343 aaPredicted RBP4.66□□□□□ -1.66
NEK1-204ENST00000509912 SGO1Q5FBB7 561 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 GUSBP11Q6P575 273 aa4.66□□□□□ -1.66
NEK1-204ENST00000509912 SYVN1Q86TM6 617 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms