RNA–Protein interactions for RNA: ENST00000509109.5

CCSER1-208, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 1,070 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-208ENST00000509109 PKDREJQ9NTG1 2253 aa6.91□□□□□ -1.3
CCSER1-208ENST00000509109 TCRBV9S1A1TA0A576 114 aa6.91□□□□□ -1.3
CCSER1-208ENST00000509109 TLDC2A0PJX2 215 aa6.91□□□□□ -1.3
CCSER1-208ENST00000509109 CCDC189A1A4V9 331 aa6.91□□□□□ -1.3
CCSER1-208ENST00000509109 ACOT7O00154 380 aa6.91□□□□□ -1.3
CCSER1-208ENST00000509109 ASNA1O43681 348 aa6.91□□□□□ -1.3
CCSER1-208ENST00000509109 STK16O75716 305 aa6.91□□□□□ -1.3
CCSER1-208ENST00000509109 ZFAND5O76080 213 aa6.91□□□□□ -1.3
CCSER1-208ENST00000509109 TUBB4AP04350 444 aa6.91□□□□□ -1.3
CCSER1-208ENST00000509109 COX7A2P14406 83 aa6.91□□□□□ -1.3
CCSER1-208ENST00000509109 HNRNPH1P31943 449 aaKnown RBP6.91□□□□□ -1.3
CCSER1-208ENST00000509109 STX2P32856 288 aa6.91□□□□□ -1.3
CCSER1-208ENST00000509109 SPRP35270 261 aaPredicted RBP6.91□□□□□ -1.3
CCSER1-208ENST00000509109 GGT5P36269 586 aa6.91□□□□□ -1.3
CCSER1-208ENST00000509109 SSR4P51571 173 aa6.91□□□□□ -1.3
CCSER1-208ENST00000509109 PGGT1BP53609 377 aa6.91□□□□□ -1.3
CCSER1-208ENST00000509109 PLA2G16P53816 162 aa6.91□□□□□ -1.3
CCSER1-208ENST00000509109 RAB10P61026 200 aa6.91□□□□□ -1.3
CCSER1-208ENST00000509109 BTG2P78543 158 aa6.91□□□□□ -1.3
CCSER1-208ENST00000509109 NAB1Q13506 487 aa6.91□□□□□ -1.3
CCSER1-208ENST00000509109 SERTAD2Q14140 314 aa6.91□□□□□ -1.3
CCSER1-208ENST00000509109 SLMAPQ14BN4 828 aa6.91□□□□□ -1.3
CCSER1-208ENST00000509109 ZNF630Q2M218 657 aaPredicted RBP6.91□□□□□ -1.3
CCSER1-208ENST00000509109 ADPRMQ3LIE5 342 aa6.91□□□□□ -1.3
CCSER1-208ENST00000509109 TMEM35AQ53FP2 167 aa6.91□□□□□ -1.3
CCSER1-208ENST00000509109 XKR6Q5GH73 641 aa6.91□□□□□ -1.3
CCSER1-208ENST00000509109 SP5Q6BEB4 398 aaPredicted RBP6.91□□□□□ -1.3
CCSER1-208ENST00000509109 ARHGAP11AQ6P4F7 1023 aa6.91□□□□□ -1.3
CCSER1-208ENST00000509109 CYS1Q717R9 158 aa6.91□□□□□ -1.3
CCSER1-208ENST00000509109 LRRC70Q7Z2Q7 622 aa6.91□□□□□ -1.3
CCSER1-208ENST00000509109 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.91□□□□□ -1.3
CCSER1-208ENST00000509109 TBC1D1Q86TI0 1168 aaPredicted RBP6.91□□□□□ -1.3
CCSER1-208ENST00000509109 SIAH3Q8IW03 269 aa6.91□□□□□ -1.3
CCSER1-208ENST00000509109 CEP97Q8IW35 865 aa6.91□□□□□ -1.3
CCSER1-208ENST00000509109 SCUBE1Q8IWY4 988 aa6.91□□□□□ -1.3
CCSER1-208ENST00000509109 MCEMP1Q8IX19 187 aa6.91□□□□□ -1.3
CCSER1-208ENST00000509109 CTAGE3PQ8IX95 158 aa6.91□□□□□ -1.3
CCSER1-208ENST00000509109 CPSF7Q8N684 471 aaKnown RBP6.91□□□□□ -1.3
CCSER1-208ENST00000509109 PDPRQ8NCN5 879 aa6.91□□□□□ -1.3
CCSER1-208ENST00000509109 OR14A16Q8NHC5 309 aa6.91□□□□□ -1.3
CCSER1-208ENST00000509109 PHF10Q8WUB8 498 aaKnown RBP6.91□□□□□ -1.3
CCSER1-208ENST00000509109 ANKRD49Q8WVL7 239 aa6.91□□□□□ -1.3
CCSER1-208ENST00000509109 MS4A6EQ96DS6 147 aa6.91□□□□□ -1.3
CCSER1-208ENST00000509109 ERP44Q9BS26 406 aa6.91□□□□□ -1.3
CCSER1-208ENST00000509109 HES7Q9BYE0 225 aa6.91□□□□□ -1.3
CCSER1-208ENST00000509109 SAYSD1Q9NPB0 183 aa6.91□□□□□ -1.3
CCSER1-208ENST00000509109 NECTIN3Q9NQS3 549 aa6.91□□□□□ -1.3
CCSER1-208ENST00000509109 PNO1Q9NRX1 252 aaKnown RBP6.91□□□□□ -1.3
CCSER1-208ENST00000509109 COQ3Q9NZJ6 369 aa6.91□□□□□ -1.3
CCSER1-208ENST00000509109 NUDT4Q9NZJ9 180 aa6.91□□□□□ -1.3
CCSER1-208ENST00000509109 CD274Q9NZQ7 290 aa6.91□□□□□ -1.3
CCSER1-208ENST00000509109 COPS7AQ9UBW8 275 aa6.91□□□□□ -1.3
CCSER1-208ENST00000509109 TINAGQ9UJW2 476 aa6.91□□□□□ -1.3
CCSER1-208ENST00000509109 FBXW2Q9UKT8 454 aa6.91□□□□□ -1.3
CCSER1-208ENST00000509109 IKZF3Q9UKT9 509 aa6.91□□□□□ -1.3
CCSER1-208ENST00000509109 PPIEQ9UNP9 301 aaKnown RBP6.91□□□□□ -1.3
CCSER1-208ENST00000509109 ERVK-11Q9UQG0 969 aa6.91□□□□□ -1.3
CCSER1-208ENST00000509109 ZNF835Q9Y2P0 537 aa6.91□□□□□ -1.3
CCSER1-208ENST00000509109 TMA7Q9Y2S6 64 aaKnown RBP6.91□□□□□ -1.3
CCSER1-208ENST00000509109 YARS2Q9Y2Z4 477 aaKnown RBP6.91□□□□□ -1.3
CCSER1-208ENST00000509109 MEMO1Q9Y316 297 aa6.91□□□□□ -1.3
CCSER1-208ENST00000509109 SNX24Q9Y343 169 aa6.91□□□□□ -1.3
CCSER1-208ENST00000509109 UTP11Q9Y3A2 253 aaKnown RBP6.91□□□□□ -1.3
CCSER1-208ENST00000509109 POLQO75417 2590 aa6.91□□□□□ -1.3
CCSER1-208ENST00000509109 TEP1Q99973 2627 aaKnown RBP6.91□□□□□ -1.3
CCSER1-208ENST00000509109 MAP1AP78559 2803 aaPredicted RBP6.91□□□□□ -1.3
CCSER1-208ENST00000509109 CCDC168Q8NDH2 2452 aa6.9□□□□□ -1.3
CCSER1-208ENST00000509109 TRAV20A0A0B4J274 112 aa6.9□□□□□ -1.3
CCSER1-208ENST00000509109 USP27XA6NNY8 438 aa6.9□□□□□ -1.3
CCSER1-208ENST00000509109 SYCE1LA8MT33 242 aa6.9□□□□□ -1.3
CCSER1-208ENST00000509109 A8MUA0 341 aa6.9□□□□□ -1.3
CCSER1-208ENST00000509109 A8MVJ9 347 aa6.9□□□□□ -1.3
CCSER1-208ENST00000509109 E9PLN8 166 aa6.9□□□□□ -1.3
CCSER1-208ENST00000509109 TP73O15350 636 aa6.9□□□□□ -1.3
CCSER1-208ENST00000509109 PHGDHO43175 533 aaKnown RBP6.9□□□□□ -1.3
CCSER1-208ENST00000509109 ITGA10O75578 1167 aa6.9□□□□□ -1.3
CCSER1-208ENST00000509109 CLDN14O95500 239 aa6.9□□□□□ -1.3
CCSER1-208ENST00000509109 IFNA16P05015 189 aa6.9□□□□□ -1.3
CCSER1-208ENST00000509109 CD1DP15813 335 aa6.9□□□□□ -1.3
CCSER1-208ENST00000509109 ELAVL4P26378 380 aaKnown RBP6.9□□□□□ -1.3
CCSER1-208ENST00000509109 PPP2R1BP30154 601 aa6.9□□□□□ -1.3
CCSER1-208ENST00000509109 SSTR1P30872 391 aa6.9□□□□□ -1.3
CCSER1-208ENST00000509109 PTGS2P35354 604 aa6.9□□□□□ -1.3
CCSER1-208ENST00000509109 GDF5P43026 501 aa6.9□□□□□ -1.3
CCSER1-208ENST00000509109 HSPA7P48741 367 aa6.9□□□□□ -1.3
CCSER1-208ENST00000509109 MEOX1P50221 254 aa6.9□□□□□ -1.3
CCSER1-208ENST00000509109 PHEXP78562 749 aa6.9□□□□□ -1.3
CCSER1-208ENST00000509109 IRF8Q02556 426 aa6.9□□□□□ -1.3
CCSER1-208ENST00000509109 GTF3C1Q12789 2109 aa6.9□□□□□ -1.3
CCSER1-208ENST00000509109 STX4Q12846 297 aa6.9□□□□□ -1.3
CCSER1-208ENST00000509109 BMPR2Q13873 1038 aa6.9□□□□□ -1.3
CCSER1-208ENST00000509109 ZKSCAN8Q15776 578 aaPredicted RBP6.9□□□□□ -1.3
CCSER1-208ENST00000509109 TBCCQ15814 346 aa6.9□□□□□ -1.3
CCSER1-208ENST00000509109 C3AR1Q16581 482 aa6.9□□□□□ -1.3
CCSER1-208ENST00000509109 GRTP1Q5TC63 336 aa6.9□□□□□ -1.3
CCSER1-208ENST00000509109 ABHD17CQ6PCB6 329 aa6.9□□□□□ -1.3
CCSER1-208ENST00000509109 HSDL2Q6YN16 418 aa6.9□□□□□ -1.3
CCSER1-208ENST00000509109 RGS9BPQ6ZS82 235 aa6.9□□□□□ -1.3
CCSER1-208ENST00000509109 RAPH1Q70E73 1250 aa6.9□□□□□ -1.3
CCSER1-208ENST00000509109 SPATC1Q76KD6 591 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms