RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 SLC1A6P48664 564 aa5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 CDH13P55290 713 aa5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 VSX2P58304 361 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 ABCE1P61221 599 aaKnown RBP5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 DUSP2Q05923 314 aa5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 CSTF3Q12996 717 aaKnown RBP5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 RAB39AQ14964 217 aa5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 HERC3Q15034 1050 aa5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 ZRSR2Q15696 482 aaKnown RBP5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 CHI3L2Q15782 390 aa5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 ADPRMQ3LIE5 342 aa5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 FBXO48Q5FWF7 155 aa5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 ARL13AQ5H913 290 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 C3orf38Q5JPI3 329 aa5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 WASHC2DQ5SRD0 308 aa5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 DEPDC1Q5TB30 811 aa5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 FRG2Q64ET8 278 aa5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 TTC19Q6DKK2 380 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 RHBDD2Q6NTF9 364 aa5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 TRIM40Q6P9F5 258 aa5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 ABHD13Q7L211 337 aa5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 VN1R4Q7Z5H5 301 aa5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 CUZD1Q86UP6 607 aa5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 MYLK4Q86YV6 388 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 TMEM126BQ8IUX1 230 aa5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 LRRC34Q8IZ02 419 aa5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 PQLC1Q8N2U9 271 aa5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 ESX1Q8N693 406 aa5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 CSNK1A1LQ8N752 337 aa5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 OR52B6Q8NGF0 335 aa5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 OR1L3Q8NH93 324 aa5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 FAM76AQ8TAV0 307 aa5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 METTL6Q8TCB7 284 aa5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 LRRC8CQ8TDW0 803 aa5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 CREB3L4Q8TEY5 395 aa5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 ZNF473Q8WTR7 871 aaKnown RBP5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 SELENOMQ8WWX9 145 aa5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 EXTL1Q92935 676 aa5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 PRR11Q96HE9 360 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 MAGEB18Q96M61 343 aa5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 QRFPRQ96P65 431 aa5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 FRG2BQ96QU4 278 aa5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 SERPINI1Q99574 410 aa5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 PAIP2Q9BPZ3 127 aaKnown RBP5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 EFHD1Q9BUP0 239 aa5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 MECRQ9BV79 373 aa5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 SCNM1Q9BWG6 230 aa5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 NPLQ9BXD5 320 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 ZNF700Q9H0M5 742 aa5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 MID1IP1Q9NPA3 183 aa5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 IRAK4Q9NWZ3 460 aa5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 PISDQ9UG56 409 aa5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 ANGPTL2Q9UKU9 493 aa5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 ZNF490Q9ULM2 529 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 SH2B3Q9UQQ2 575 aa5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 KLHL20Q9Y2M5 609 aa5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 WBP11Q9Y2W2 641 aaKnown RBP5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 RNF11Q9Y3C5 154 aa5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 SPEGQ15772 3267 aa5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 SCN3AQ9NY46 2000 aa5.19□□□□□ -1.58
HMGB1P44-201ENST00000508597 SDK2Q58EX2 2172 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 LOC105369274A0A096LPK9 316 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 LOC102723532A0A0G2JNH3 316 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 A0A1B0GX78 115 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 FEZF1A0PJY2 475 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 WDR91A4D1P6 747 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 LRIT2A6NDA9 550 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 TRABD2BA6NFA1 517 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 STMND1H3BQB6 276 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 SLC28A1O00337 649 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 MANBAO00462 879 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 PCDH17O14917 1159 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 DSCR3O14972 297 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 CASC3O15234 703 aaKnown RBP5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 NDUFS4O43181 175 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 ZNF749O43361 778 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 RGS14O43566 566 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 SNNO75324 88 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 GUCY1B2O75343 617 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 VPS4BO75351 444 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 STK17BO94768 372 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 OR4F21O95013 312 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 SCELO95171 688 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 NSA2O95478 260 aaKnown RBP5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 HSPA4LO95757 839 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 EIF2S1P05198 315 aaKnown RBP5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 CAPN1P07384 714 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 CYC1P08574 325 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 SMIM10L1P0DMW3 83 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 PCNAP12004 261 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 ALOX12P18054 663 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 RHCEP18577 417 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 ITIH1P19827 911 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 BGNP21810 368 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 PRPH2P23942 346 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 RPS19P39019 145 aaKnown RBP5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 GSTM5P46439 218 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 AVPR1BP47901 424 aa5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 RPL14P50914 215 aaKnown RBP5.18□□□□□ -1.58
HMGB1P44-201ENST00000508597 MAP2K6P52564 334 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms