RNA–Protein interactions for RNA: ENST00000508459.5

HMGCLL1-208, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-208ENST00000508459 MAP10Q9P2G4 905 aa13.52□□□□□ -0.25
HMGCLL1-208ENST00000508459 SNX8Q9Y5X2 465 aa13.52□□□□□ -0.25
HMGCLL1-208ENST00000508459 IGKV3D-11A0A0A0MRZ8 115 aa13.51□□□□□ -0.25
HMGCLL1-208ENST00000508459 RNF103-CHMP3A0A140T963 221 aa13.51□□□□□ -0.25
HMGCLL1-208ENST00000508459 ERICH4A6NGS2 130 aa13.51□□□□□ -0.25
HMGCLL1-208ENST00000508459 WASHC1A8K0Z3 465 aa13.51□□□□□ -0.25
HMGCLL1-208ENST00000508459 IDSB3KWA1 339 aa13.51□□□□□ -0.25
HMGCLL1-208ENST00000508459 FGF17O60258 216 aa13.51□□□□□ -0.25
HMGCLL1-208ENST00000508459 ALOX12BO75342 701 aa13.51□□□□□ -0.25
HMGCLL1-208ENST00000508459 B3GALT4O96024 378 aa13.51□□□□□ -0.25
HMGCLL1-208ENST00000508459 AK1P00568 194 aa13.51□□□□□ -0.25
HMGCLL1-208ENST00000508459 FEN1P39748 380 aaKnown RBP13.51□□□□□ -0.25
HMGCLL1-208ENST00000508459 KHKP50053 298 aa13.51□□□□□ -0.25
HMGCLL1-208ENST00000508459 NCALDP61601 193 aa13.51□□□□□ -0.25
HMGCLL1-208ENST00000508459 DCAF7P61962 342 aa13.51□□□□□ -0.25
HMGCLL1-208ENST00000508459 MAT1AQ00266 395 aaKnown RBP13.51□□□□□ -0.25
HMGCLL1-208ENST00000508459 RUNDC3AQ59EK9 446 aa13.51□□□□□ -0.25
HMGCLL1-208ENST00000508459 MTX3Q5HYI7 312 aa13.51□□□□□ -0.25
HMGCLL1-208ENST00000508459 PAGE3Q5JUK9 113 aa13.51□□□□□ -0.25
HMGCLL1-208ENST00000508459 ANKRD26P1Q6NSI1 321 aa13.51□□□□□ -0.25
HMGCLL1-208ENST00000508459 ANGPTL8Q6UXH0 198 aa13.51□□□□□ -0.25
HMGCLL1-208ENST00000508459 DLEU7Q6UYE1 221 aa13.51□□□□□ -0.25
HMGCLL1-208ENST00000508459 ASRGL1Q7L266 308 aa13.51□□□□□ -0.25
HMGCLL1-208ENST00000508459 DGLUCYQ7Z3D6 616 aa13.51□□□□□ -0.25
HMGCLL1-208ENST00000508459 RETREG3Q86VR2 466 aa13.51□□□□□ -0.25
HMGCLL1-208ENST00000508459 RAB43Q86YS6 212 aa13.51□□□□□ -0.25
HMGCLL1-208ENST00000508459 OR2L13Q8N349 312 aa13.51□□□□□ -0.25
HMGCLL1-208ENST00000508459 METTL27Q8N6F8 245 aaPredicted RBP13.51□□□□□ -0.25
HMGCLL1-208ENST00000508459 OR52N2Q8NGI0 321 aa13.51□□□□□ -0.25
HMGCLL1-208ENST00000508459 NCLNQ969V3 563 aa13.51□□□□□ -0.25
HMGCLL1-208ENST00000508459 CIDECQ96AQ7 238 aaPredicted RBP13.51□□□□□ -0.25
HMGCLL1-208ENST00000508459 ANKRD9Q96BM1 317 aaPredicted RBP13.51□□□□□ -0.25
HMGCLL1-208ENST00000508459 ELP4Q96EB1 424 aa13.51□□□□□ -0.25
HMGCLL1-208ENST00000508459 FBXL20Q96IG2 436 aa13.51□□□□□ -0.25
HMGCLL1-208ENST00000508459 LPAR4Q99677 370 aa13.51□□□□□ -0.25
HMGCLL1-208ENST00000508459 VN1R1Q9GZP7 353 aa13.51□□□□□ -0.25
HMGCLL1-208ENST00000508459 TRIM45Q9H8W5 580 aaPredicted RBP13.51□□□□□ -0.25
HMGCLL1-208ENST00000508459 CXorf21Q9HAI6 301 aa13.51□□□□□ -0.25
HMGCLL1-208ENST00000508459 HHATLQ9HCP6 504 aa13.51□□□□□ -0.25
HMGCLL1-208ENST00000508459 ZCCHC3Q9NUD5 404 aaKnown RBP13.51□□□□□ -0.25
HMGCLL1-208ENST00000508459 EXD2Q9NVH0 621 aa13.51□□□□□ -0.25
HMGCLL1-208ENST00000508459 ABCD2Q9UBJ2 740 aa13.51□□□□□ -0.25
HMGCLL1-208ENST00000508459 C3orf18Q9UK00 162 aa13.51□□□□□ -0.25
HMGCLL1-208ENST00000508459 MRTO4Q9UKD2 239 aaKnown RBP13.51□□□□□ -0.25
HMGCLL1-208ENST00000508459 LIPT1Q9Y234 373 aa13.51□□□□□ -0.25
HMGCLL1-208ENST00000508459 PCDHB14Q9Y5E9 798 aa13.51□□□□□ -0.25
HMGCLL1-208ENST00000508459 SPTBP11277 2137 aa13.51□□□□□ -0.25
HMGCLL1-208ENST00000508459 CDRT15L2A8MXV6 281 aa13.5□□□□□ -0.25
HMGCLL1-208ENST00000508459 C9orf172C9J069 976 aa13.5□□□□□ -0.25
HMGCLL1-208ENST00000508459 LDB3O75112 727 aa13.5□□□□□ -0.25
HMGCLL1-208ENST00000508459 MED26O95402 600 aa13.5□□□□□ -0.25
HMGCLL1-208ENST00000508459 TIAF1O95411 115 aa13.5□□□□□ -0.25
HMGCLL1-208ENST00000508459 IFNA14P01570 189 aa13.5□□□□□ -0.25
HMGCLL1-208ENST00000508459 LIPCP11150 499 aa13.5□□□□□ -0.25
HMGCLL1-208ENST00000508459 HSD17B1P14061 328 aa13.5□□□□□ -0.25
HMGCLL1-208ENST00000508459 GPX2P18283 190 aa13.5□□□□□ -0.25
HMGCLL1-208ENST00000508459 ME2P23368 584 aa13.5□□□□□ -0.25
HMGCLL1-208ENST00000508459 SLC6A2P23975 617 aa13.5□□□□□ -0.25
HMGCLL1-208ENST00000508459 CPOXP36551 454 aa13.5□□□□□ -0.25
HMGCLL1-208ENST00000508459 CPA2P48052 419 aa13.5□□□□□ -0.25
HMGCLL1-208ENST00000508459 RHAGQ02094 409 aa13.5□□□□□ -0.25
HMGCLL1-208ENST00000508459 SSPNQ14714 243 aa13.5□□□□□ -0.25
HMGCLL1-208ENST00000508459 EXT1Q16394 746 aa13.5□□□□□ -0.25
HMGCLL1-208ENST00000508459 ZNF385BQ569K4 471 aa13.5□□□□□ -0.25
HMGCLL1-208ENST00000508459 NANOGP8Q6NSW7 305 aa13.5□□□□□ -0.25
HMGCLL1-208ENST00000508459 C8orf82Q6P1X6 216 aaPredicted RBP13.5□□□□□ -0.25
HMGCLL1-208ENST00000508459 COX15Q7KZN9 410 aa13.5□□□□□ -0.25
HMGCLL1-208ENST00000508459 ANKRD46Q86W74 232 aa13.5□□□□□ -0.25
HMGCLL1-208ENST00000508459 CDRT4Q8N9R6 151 aa13.5□□□□□ -0.25
HMGCLL1-208ENST00000508459 SLC38A9Q8NBW4 561 aa13.5□□□□□ -0.25
HMGCLL1-208ENST00000508459 MIPOL1Q8TD10 442 aa13.5□□□□□ -0.25
HMGCLL1-208ENST00000508459 ZFP90Q8TF47 636 aa13.5□□□□□ -0.25
HMGCLL1-208ENST00000508459 OIT3Q8WWZ8 545 aa13.5□□□□□ -0.25
HMGCLL1-208ENST00000508459 MARVELD3Q96A59 401 aa13.5□□□□□ -0.25
HMGCLL1-208ENST00000508459 SLC7A6OSQ96CW6 309 aaPredicted RBP13.5□□□□□ -0.25
HMGCLL1-208ENST00000508459 FAM120BQ96EK7 910 aaKnown RBP13.5□□□□□ -0.25
HMGCLL1-208ENST00000508459 SPRY4Q9C004 299 aa13.5□□□□□ -0.25
HMGCLL1-208ENST00000508459 CHST8Q9H2A9 424 aa13.5□□□□□ -0.25
HMGCLL1-208ENST00000508459 NANOGQ9H9S0 305 aa13.5□□□□□ -0.25
HMGCLL1-208ENST00000508459 TMEM181Q9P2C4 612 aa13.5□□□□□ -0.25
HMGCLL1-208ENST00000508459 CTSFQ9UBX1 484 aa13.5□□□□□ -0.25
HMGCLL1-208ENST00000508459 C19orf53Q9UNZ5 99 aaPredicted RBP13.5□□□□□ -0.25
HMGCLL1-208ENST00000508459 FARSAQ9Y285 508 aaKnown RBP13.5□□□□□ -0.25
HMGCLL1-208ENST00000508459 PCDHGA6Q9Y5G7 932 aa13.5□□□□□ -0.25
HMGCLL1-208ENST00000508459 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.5□□□□□ -0.25
HMGCLL1-208ENST00000508459 TRBV5-3A0A0A0MS03 114 aa13.49□□□□□ -0.25
HMGCLL1-208ENST00000508459 ASPDHA6ND91 283 aa13.49□□□□□ -0.25
HMGCLL1-208ENST00000508459 C9JVG2 144 aa13.49□□□□□ -0.25
HMGCLL1-208ENST00000508459 FAM227AF5H4B4 570 aa13.49□□□□□ -0.25
HMGCLL1-208ENST00000508459 CDK2AP1O14519 115 aa13.49□□□□□ -0.25
HMGCLL1-208ENST00000508459 CASC3O15234 703 aaKnown RBP13.49□□□□□ -0.25
HMGCLL1-208ENST00000508459 GSC2O15499 205 aa13.49□□□□□ -0.25
HMGCLL1-208ENST00000508459 HYAL3O43820 417 aaPredicted RBP13.49□□□□□ -0.25
HMGCLL1-208ENST00000508459 RAD1O60671 282 aa13.49□□□□□ -0.25
HMGCLL1-208ENST00000508459 TCN2P20062 427 aa13.49□□□□□ -0.25
HMGCLL1-208ENST00000508459 MMP11P24347 488 aa13.49□□□□□ -0.25
HMGCLL1-208ENST00000508459 ETV5P41161 510 aa13.49□□□□□ -0.25
HMGCLL1-208ENST00000508459 STAT5AP42229 794 aa13.49□□□□□ -0.25
HMGCLL1-208ENST00000508459 PSMD4P55036 377 aaKnown RBP13.49□□□□□ -0.25
HMGCLL1-208ENST00000508459 OR4D2P58180 307 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms