RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 C1QL4Q86Z23 238 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 CDK20Q8IZL9 346 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 STK40Q8N2I9 435 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 LCORLQ8N3X6 602 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 OR6J1Q8NGC5 347 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 OR4C15Q8NGM1 316 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 C9orf43Q8TAL5 461 aaPredicted RBP10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 HMGCLL1Q8TB92 370 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 THAP6Q8TBB0 222 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 ZBED6CLQ96FA7 236 aaPredicted RBP10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 PPM1MQ96MI6 270 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 TMEM43Q9BTV4 400 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 SPATA5L1Q9BVQ7 753 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 RAB34Q9BZG1 259 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 GABARAPL1Q9H0R8 117 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 TSPAN10Q9H1Z9 355 aaPredicted RBP10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 PPP1R3EQ9H7J1 279 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 NSMCE4AQ9NXX6 385 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 GPR55Q9Y2T6 319 aaPredicted RBP10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 PXDNQ92626 1479 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 ANXA2P2A6NMY6 339 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 A8MWP6 167 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 VSTM5A8MXK1 200 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 E9PQ18 207 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 SYT5O00445 386 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 DVL2O14641 736 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 KIAA0513O60268 411 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 OR10H2O60403 315 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 TPST1O60507 370 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 MAFKO60675 156 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 SCAF4O95104 1147 aaKnown RBP10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 PRAMEF1O95521 474 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 THBS1P07996 1170 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 HOXB5P09067 269 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 CLTBP09497 229 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 CTXN2P0C2S0 81 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 C6P13671 934 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 HOXA5P20719 270 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 TBXA2RP21731 343 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 HTR1EP28566 365 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 GRK5P34947 590 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 FMO5P49326 533 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 YWHAZP63104 245 aaKnown RBP10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 HTRA3P83110 453 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 HTD2P86397 168 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 SLC14A1Q13336 389 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 LRRC32Q14392 662 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 PLA1AQ53H76 456 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 ARHGAP15Q53QZ3 475 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 ARMC12Q5T9G4 340 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 ZNF385CQ66K41 422 aaPredicted RBP10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 GJB7Q6PEY0 223 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 FAM131AQ6UXB0 335 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 GK5Q6ZS86 529 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 BHLHA15Q7RTS1 189 aaPredicted RBP10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 CPNE8Q86YQ8 564 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 IGDCC3Q8IVU1 814 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 FAM185AQ8N0U4 392 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 CLDN22Q8N7P3 220 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 GPRC5AQ8NFJ5 357 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 BPIFCQ8NFQ6 507 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 OR5T3Q8NGG3 340 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 CD99L2Q8TCZ2 262 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 WFIKKN2Q8TEU8 576 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 LIPHQ8WWY8 451 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 ING5Q8WYH8 240 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 CORO2AQ92828 525 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 C5orf34Q96MH7 638 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 PKMYT1Q99640 499 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 WDR55Q9H6Y2 383 aaPredicted RBP10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 TUBA4BQ9H853 241 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 NMNAT1Q9HAN9 279 aaPredicted RBP10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 BRF2Q9HAW0 419 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 BARX1Q9HBU1 254 aaPredicted RBP10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 POPDC2Q9HBU9 364 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 PDP1Q9P0J1 537 aaPredicted RBP10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 FKBPLQ9UIM3 349 aa10.29□□□□□ -0.76
PDLIM5-210ENST00000508216 DOT1LQ8TEK3 1739 aa10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 PHIPQ8WWQ0 1821 aa10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 SCN9AQ15858 1988 aa10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 LCHNA4D1U4 455 aa10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 TRAPPC13A5PLN9 417 aa10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 TBC1D3BA6NDS4 549 aa10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 FABP12A6NFH5 140 aa10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 A6NIZ1 184 aa10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 C5orf58C9J3I9 102 aa10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 CYR61O00622 381 aa10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 PMM2O15305 246 aa10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 KDM4BO94953 1096 aa10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 MMP3P08254 477 aa10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 PEPDP12955 493 aa10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 GABRA1P14867 456 aa10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 PPP3CBP16298 524 aa10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 UGT2B7P16662 529 aa10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 FSHRP23945 695 aa10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 ITGB7P26010 798 aa10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 PSMB6P28072 239 aa10.28□□□□□ -0.76
PDLIM5-210ENST00000508216 PBX3P40426 434 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms