RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 TEX10Q9NXF1 929 aaPredicted RBP10.61□□□□□ -0.71
HMGCS1-204ENST00000507293 B4GALT7Q9UBV7 327 aa10.61□□□□□ -0.71
HMGCS1-204ENST00000507293 L3MBTL1Q9Y468 752 aa10.61□□□□□ -0.71
HMGCS1-204ENST00000507293 KIAA1549Q9HCM3 1950 aa10.61□□□□□ -0.71
HMGCS1-204ENST00000507293 C2orf92A0A1B0GVN3 265 aa10.6□□□□□ -0.71
HMGCS1-204ENST00000507293 FAM47E-STBD1D6RA91 191 aa10.6□□□□□ -0.71
HMGCS1-204ENST00000507293 FOXE1O00358 373 aaPredicted RBP10.6□□□□□ -0.71
HMGCS1-204ENST00000507293 OR7A17O14581 309 aa10.6□□□□□ -0.71
HMGCS1-204ENST00000507293 SEMA3DO95025 777 aa10.6□□□□□ -0.71
HMGCS1-204ENST00000507293 ZWINTO95229 277 aa10.6□□□□□ -0.71
HMGCS1-204ENST00000507293 CLDN9O95484 217 aa10.6□□□□□ -0.71
HMGCS1-204ENST00000507293 ALDOAP04075 364 aaKnown RBP10.6□□□□□ -0.71
HMGCS1-204ENST00000507293 CT62P0C5K7 136 aa10.6□□□□□ -0.71
HMGCS1-204ENST00000507293 SLC35E2P0CK97 266 aa10.6□□□□□ -0.71
HMGCS1-204ENST00000507293 GDF1P27539 372 aa10.6□□□□□ -0.71
HMGCS1-204ENST00000507293 PIK3R1P27986 724 aa10.6□□□□□ -0.71
HMGCS1-204ENST00000507293 TYK2P29597 1187 aa10.6□□□□□ -0.71
HMGCS1-204ENST00000507293 GALNSP34059 522 aa10.6□□□□□ -0.71
HMGCS1-204ENST00000507293 TRPC1P48995 793 aa10.6□□□□□ -0.71
HMGCS1-204ENST00000507293 SLC25A35Q3KQZ1 300 aa10.6□□□□□ -0.71
HMGCS1-204ENST00000507293 TBCELQ5QJ74 424 aa10.6□□□□□ -0.71
HMGCS1-204ENST00000507293 RIPPLY2Q5TAB7 128 aa10.6□□□□□ -0.71
HMGCS1-204ENST00000507293 SYT10Q6XYQ8 523 aa10.6□□□□□ -0.71
HMGCS1-204ENST00000507293 ULK2Q8IYT8 1036 aa10.6□□□□□ -0.71
HMGCS1-204ENST00000507293 TAGAPQ8N103 731 aa10.6□□□□□ -0.71
HMGCS1-204ENST00000507293 PLD6Q8N2A8 252 aaKnown RBP10.6□□□□□ -0.71
HMGCS1-204ENST00000507293 LIX1Q8N485 282 aa10.6□□□□□ -0.71
HMGCS1-204ENST00000507293 ZNF441Q8N8Z8 693 aa10.6□□□□□ -0.71
HMGCS1-204ENST00000507293 MYRIPQ8NFW9 859 aa10.6□□□□□ -0.71
HMGCS1-204ENST00000507293 OR52B6Q8NGF0 335 aa10.6□□□□□ -0.71
HMGCS1-204ENST00000507293 NEIL3Q8TAT5 605 aa10.6□□□□□ -0.71
HMGCS1-204ENST00000507293 NRGNQ92686 78 aa10.6□□□□□ -0.71
HMGCS1-204ENST00000507293 DIO2Q92813 273 aa10.6□□□□□ -0.71
HMGCS1-204ENST00000507293 SERPINI1Q99574 410 aa10.6□□□□□ -0.71
HMGCS1-204ENST00000507293 NOL11Q9H8H0 719 aaKnown RBP10.6□□□□□ -0.71
HMGCS1-204ENST00000507293 CXorf21Q9HAI6 301 aa10.6□□□□□ -0.71
HMGCS1-204ENST00000507293 SLC24A3Q9HC58 644 aa10.6□□□□□ -0.71
HMGCS1-204ENST00000507293 ACKR4Q9NPB9 350 aa10.6□□□□□ -0.71
HMGCS1-204ENST00000507293 ZDHHC18Q9NUE0 388 aa10.6□□□□□ -0.71
HMGCS1-204ENST00000507293 RYDENQ9NUL5 291 aaKnown RBP10.6□□□□□ -0.71
HMGCS1-204ENST00000507293 QPCTLQ9NXS2 382 aa10.6□□□□□ -0.71
HMGCS1-204ENST00000507293 PSD3Q9NYI0 1048 aa10.6□□□□□ -0.71
HMGCS1-204ENST00000507293 TNPO3Q9Y5L0 923 aaKnown RBP10.6□□□□□ -0.71
HMGCS1-204ENST00000507293 C2CD3Q4AC94 2353 aa10.59□□□□□ -0.71
HMGCS1-204ENST00000507293 C15orf38-AP3S2A0A0A6YYH1 394 aa10.59□□□□□ -0.71
HMGCS1-204ENST00000507293 PGRMC2O15173 223 aa10.59□□□□□ -0.71
HMGCS1-204ENST00000507293 TRIM3O75382 744 aaPredicted RBP10.59□□□□□ -0.71
HMGCS1-204ENST00000507293 ART1P52961 327 aa10.59□□□□□ -0.71
HMGCS1-204ENST00000507293 FBXW4P57775 412 aa10.59□□□□□ -0.71
HMGCS1-204ENST00000507293 ETF1P62495 437 aaKnown RBP10.59□□□□□ -0.71
HMGCS1-204ENST00000507293 SNTB1Q13884 538 aaKnown RBP10.59□□□□□ -0.71
HMGCS1-204ENST00000507293 RPS6KA2Q15349 733 aa10.59□□□□□ -0.71
HMGCS1-204ENST00000507293 HLA-DQA1Q5Y7H0 255 aa10.59□□□□□ -0.71
HMGCS1-204ENST00000507293 BICRALQ6AI39 1079 aa10.59□□□□□ -0.71
HMGCS1-204ENST00000507293 C8orf74Q6P047 294 aa10.59□□□□□ -0.71
HMGCS1-204ENST00000507293 METTL2BQ6P1Q9 378 aaKnown RBP10.59□□□□□ -0.71
HMGCS1-204ENST00000507293 ARSKQ6UWY0 536 aa10.59□□□□□ -0.71
HMGCS1-204ENST00000507293 SEM1Q6ZVN7 128 aa10.59□□□□□ -0.71
HMGCS1-204ENST00000507293 ZNF572Q7Z3I7 529 aaPredicted RBP10.59□□□□□ -0.71
HMGCS1-204ENST00000507293 GALNT12Q8IXK2 581 aa10.59□□□□□ -0.71
HMGCS1-204ENST00000507293 ZZZ3Q8IYH5 903 aa10.59□□□□□ -0.71
HMGCS1-204ENST00000507293 SPPL2AQ8TCT8 520 aa10.59□□□□□ -0.71
HMGCS1-204ENST00000507293 ATP6V1E2Q96A05 226 aa10.59□□□□□ -0.71
HMGCS1-204ENST00000507293 TP53INP1Q96A56 240 aa10.59□□□□□ -0.71
HMGCS1-204ENST00000507293 ACSS3Q9H6R3 686 aa10.59□□□□□ -0.71
HMGCS1-204ENST00000507293 ZNF358Q9NW07 568 aa10.59□□□□□ -0.71
HMGCS1-204ENST00000507293 NINJ2Q9NZG7 142 aa10.59□□□□□ -0.71
HMGCS1-204ENST00000507293 PCDHGB3Q9Y5G1 929 aa10.59□□□□□ -0.71
HMGCS1-204ENST00000507293 HIVEP1P15822 2718 aa10.59□□□□□ -0.71
HMGCS1-204ENST00000507293 ADGRG4Q8IZF6 3080 aa10.59□□□□□ -0.71
HMGCS1-204ENST00000507293 ANKRD33BA6NCL7 494 aa10.58□□□□□ -0.72
HMGCS1-204ENST00000507293 CAPN14A8MX76 684 aa10.58□□□□□ -0.72
HMGCS1-204ENST00000507293 STX16-NPEPL1H3BU86 382 aa10.58□□□□□ -0.72
HMGCS1-204ENST00000507293 STX16O14662 325 aa10.58□□□□□ -0.72
HMGCS1-204ENST00000507293 TP53I11O14683 189 aa10.58□□□□□ -0.72
HMGCS1-204ENST00000507293 KLK1P06870 262 aa10.58□□□□□ -0.72
HMGCS1-204ENST00000507293 CD1EP15812 388 aa10.58□□□□□ -0.72
HMGCS1-204ENST00000507293 NT5EP21589 574 aa10.58□□□□□ -0.72
HMGCS1-204ENST00000507293 DNAJA1P31689 397 aaKnown RBP10.58□□□□□ -0.72
HMGCS1-204ENST00000507293 PHBP35232 272 aa10.58□□□□□ -0.72
HMGCS1-204ENST00000507293 MASP1P48740 699 aa10.58□□□□□ -0.72
HMGCS1-204ENST00000507293 CCNG1P51959 295 aa10.58□□□□□ -0.72
HMGCS1-204ENST00000507293 WNT3P56703 355 aa10.58□□□□□ -0.72
HMGCS1-204ENST00000507293 CKAP4Q07065 602 aaKnown RBP10.58□□□□□ -0.72
HMGCS1-204ENST00000507293 CRYZQ08257 329 aaKnown RBP10.58□□□□□ -0.72
HMGCS1-204ENST00000507293 FUT7Q11130 342 aa10.58□□□□□ -0.72
HMGCS1-204ENST00000507293 TRAF3Q13114 568 aa10.58□□□□□ -0.72
HMGCS1-204ENST00000507293 DUSP8Q13202 625 aa10.58□□□□□ -0.72
HMGCS1-204ENST00000507293 ACSF3Q4G176 576 aaPredicted RBP10.58□□□□□ -0.72
HMGCS1-204ENST00000507293 C6orf163Q5TEZ5 329 aa10.58□□□□□ -0.72
HMGCS1-204ENST00000507293 FRG2Q64ET8 278 aa10.58□□□□□ -0.72
HMGCS1-204ENST00000507293 TMEM198Q66K66 360 aa10.58□□□□□ -0.72
HMGCS1-204ENST00000507293 TTC19Q6DKK2 380 aaPredicted RBP10.58□□□□□ -0.72
HMGCS1-204ENST00000507293 PRR22Q8IZ63 422 aa10.58□□□□□ -0.72
HMGCS1-204ENST00000507293 ZNF615Q8N8J6 731 aa10.58□□□□□ -0.72
HMGCS1-204ENST00000507293 RELL2Q8NC24 303 aaPredicted RBP10.58□□□□□ -0.72
HMGCS1-204ENST00000507293 NAXEQ8NCW5 288 aa10.58□□□□□ -0.72
HMGCS1-204ENST00000507293 OR4K14Q8NGD5 310 aa10.58□□□□□ -0.72
HMGCS1-204ENST00000507293 PHF21BQ96EK2 531 aa10.58□□□□□ -0.72
HMGCS1-204ENST00000507293 RILPQ96NA2 401 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms