RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 PAIP1Q9H074 479 aaKnown RBP13.26□□□□□ -0.29
RNF4-208ENST00000507247 ADAP2Q9NPF8 381 aa13.26□□□□□ -0.29
RNF4-208ENST00000507247 SEMA3GQ9NS98 782 aa13.26□□□□□ -0.29
RNF4-208ENST00000507247 TAS2R9Q9NYW1 312 aa13.26□□□□□ -0.29
RNF4-208ENST00000507247 MAT2BQ9NZL9 334 aa13.26□□□□□ -0.29
RNF4-208ENST00000507247 CHD8Q9HCK8 2581 aa13.26□□□□□ -0.29
RNF4-208ENST00000507247 A0A096LPI6 279 aa13.25□□□□□ -0.29
RNF4-208ENST00000507247 FXYD1O00168 92 aa13.25□□□□□ -0.29
RNF4-208ENST00000507247 SOCS6O14544 535 aa13.25□□□□□ -0.29
RNF4-208ENST00000507247 RFXANKO14593 260 aa13.25□□□□□ -0.29
RNF4-208ENST00000507247 AIM2O14862 343 aa13.25□□□□□ -0.29
RNF4-208ENST00000507247 C1QCP02747 245 aa13.25□□□□□ -0.29
RNF4-208ENST00000507247 GSNP06396 782 aa13.25□□□□□ -0.29
RNF4-208ENST00000507247 ESRRAP11474 423 aaPredicted RBP13.25□□□□□ -0.29
RNF4-208ENST00000507247 MC3RP41968 323 aa13.25□□□□□ -0.29
RNF4-208ENST00000507247 OR4D2P58180 307 aa13.25□□□□□ -0.29
RNF4-208ENST00000507247 MRPS35P82673 323 aaKnown RBP13.25□□□□□ -0.29
RNF4-208ENST00000507247 EEF1A2Q05639 463 aaKnown RBP13.25□□□□□ -0.29
RNF4-208ENST00000507247 BIKQ13323 160 aa13.25□□□□□ -0.29
RNF4-208ENST00000507247 GAB1Q13480 694 aa13.25□□□□□ -0.29
RNF4-208ENST00000507247 SFT2D3Q587I9 215 aa13.25□□□□□ -0.29
RNF4-208ENST00000507247 LRIF1Q5T3J3 769 aa13.25□□□□□ -0.29
RNF4-208ENST00000507247 TMEM107Q6UX40 140 aa13.25□□□□□ -0.29
RNF4-208ENST00000507247 DLEU7Q6UYE1 221 aa13.25□□□□□ -0.29
RNF4-208ENST00000507247 DHDDSQ86SQ9 333 aa13.25□□□□□ -0.29
RNF4-208ENST00000507247 MSRB3Q8IXL7 192 aa13.25□□□□□ -0.29
RNF4-208ENST00000507247 CLEC4FQ8N1N0 589 aa13.25□□□□□ -0.29
RNF4-208ENST00000507247 SIMC1Q8NDZ2 872 aa13.25□□□□□ -0.29
RNF4-208ENST00000507247 OR7G2Q8NG99 324 aa13.25□□□□□ -0.29
RNF4-208ENST00000507247 FBXO27Q8NI29 283 aa13.25□□□□□ -0.29
RNF4-208ENST00000507247 PSMA8Q8TAA3 256 aa13.25□□□□□ -0.29
RNF4-208ENST00000507247 ZNF675Q8TD23 568 aa13.25□□□□□ -0.29
RNF4-208ENST00000507247 PTPMT1Q8WUK0 201 aaPredicted RBP13.25□□□□□ -0.29
RNF4-208ENST00000507247 METTL21AQ8WXB1 218 aa13.25□□□□□ -0.29
RNF4-208ENST00000507247 GATA6Q92908 595 aa13.25□□□□□ -0.29
RNF4-208ENST00000507247 FGF11Q92914 225 aa13.25□□□□□ -0.29
RNF4-208ENST00000507247 CTHRC1Q96CG8 243 aa13.25□□□□□ -0.29
RNF4-208ENST00000507247 RBM18Q96H35 190 aaKnown RBP13.25□□□□□ -0.29
RNF4-208ENST00000507247 NAF1Q96HR8 494 aaKnown RBP13.25□□□□□ -0.29
RNF4-208ENST00000507247 PANX1Q96RD7 426 aa13.25□□□□□ -0.29
RNF4-208ENST00000507247 WDR77Q9BQA1 342 aaPredicted RBP13.25□□□□□ -0.29
RNF4-208ENST00000507247 PELOQ9BRX2 385 aaKnown RBP13.25□□□□□ -0.29
RNF4-208ENST00000507247 FAM117AQ9C073 453 aa13.25□□□□□ -0.29
RNF4-208ENST00000507247 ANKRA2Q9H9E1 313 aa13.25□□□□□ -0.29
RNF4-208ENST00000507247 GPN2Q9H9Y4 310 aaPredicted RBP13.25□□□□□ -0.29
RNF4-208ENST00000507247 CXorf21Q9HAI6 301 aa13.25□□□□□ -0.29
RNF4-208ENST00000507247 IL1RL2Q9HB29 575 aa13.25□□□□□ -0.29
RNF4-208ENST00000507247 SLC25A37Q9NYZ2 338 aa13.25□□□□□ -0.29
RNF4-208ENST00000507247 KCND3Q9UK17 655 aa13.25□□□□□ -0.29
RNF4-208ENST00000507247 HS3ST3B1Q9Y662 390 aa13.25□□□□□ -0.29
RNF4-208ENST00000507247 LOC102723996A0A087X1L8 192 aa13.24□□□□□ -0.29
RNF4-208ENST00000507247 TRBV5-3A0A0A0MS03 114 aa13.24□□□□□ -0.29
RNF4-208ENST00000507247 C17orf105B2RV13 164 aa13.24□□□□□ -0.29
RNF4-208ENST00000507247 HRKO00198 91 aa13.24□□□□□ -0.29
RNF4-208ENST00000507247 EBAG9O00559 213 aa13.24□□□□□ -0.29
RNF4-208ENST00000507247 KCNH1O95259 989 aa13.24□□□□□ -0.29
RNF4-208ENST00000507247 S1PR1P21453 382 aa13.24□□□□□ -0.29
RNF4-208ENST00000507247 CALB2P22676 271 aa13.24□□□□□ -0.29
RNF4-208ENST00000507247 MMP11P24347 488 aa13.24□□□□□ -0.29
RNF4-208ENST00000507247 GALNSP34059 522 aa13.24□□□□□ -0.29
RNF4-208ENST00000507247 GPC1P35052 558 aa13.24□□□□□ -0.29
RNF4-208ENST00000507247 TRPC1P48995 793 aa13.24□□□□□ -0.29
RNF4-208ENST00000507247 NUDT2P50583 147 aa13.24□□□□□ -0.29
RNF4-208ENST00000507247 LRRC74AQ0VAA2 488 aa13.24□□□□□ -0.29
RNF4-208ENST00000507247 MAP4K2Q12851 820 aa13.24□□□□□ -0.29
RNF4-208ENST00000507247 BNIP1Q12981 228 aa13.24□□□□□ -0.29
RNF4-208ENST00000507247 NFYCQ13952 458 aa13.24□□□□□ -0.29
RNF4-208ENST00000507247 SSPNQ14714 243 aa13.24□□□□□ -0.29
RNF4-208ENST00000507247 PCOLCEQ15113 449 aa13.24□□□□□ -0.29
RNF4-208ENST00000507247 ELAVL1Q15717 326 aaKnown RBP13.24□□□□□ -0.29
RNF4-208ENST00000507247 TRMT12Q53H54 448 aaKnown RBP13.24□□□□□ -0.29
RNF4-208ENST00000507247 FHL5Q5TD97 284 aa13.24□□□□□ -0.29
RNF4-208ENST00000507247 CPEB2Q7Z5Q1 589 aaKnown RBP13.24□□□□□ -0.29
RNF4-208ENST00000507247 PPP1R32Q7Z5V6 425 aa13.24□□□□□ -0.29
RNF4-208ENST00000507247 GALNT12Q8IXK2 581 aa13.24□□□□□ -0.29
RNF4-208ENST00000507247 OR5AK3PQ8NH89 298 aa13.24□□□□□ -0.29
RNF4-208ENST00000507247 RIT1Q92963 219 aa13.24□□□□□ -0.29
RNF4-208ENST00000507247 ELP4Q96EB1 424 aa13.24□□□□□ -0.29
RNF4-208ENST00000507247 PHF12Q96QT6 1004 aa13.24□□□□□ -0.29
RNF4-208ENST00000507247 SLC39A3Q9BRY0 314 aa13.24□□□□□ -0.29
RNF4-208ENST00000507247 TMEM121BQ9BXQ6 578 aaPredicted RBP13.24□□□□□ -0.29
RNF4-208ENST00000507247 NEUROD4Q9HD90 331 aa13.24□□□□□ -0.29
RNF4-208ENST00000507247 VAPAQ9P0L0 249 aa13.24□□□□□ -0.29
RNF4-208ENST00000507247 ZNF639Q9UID6 485 aa13.24□□□□□ -0.29
RNF4-208ENST00000507247 PCDHGB4Q9UN71 923 aa13.24□□□□□ -0.29
RNF4-208ENST00000507247 PCDHB14Q9Y5E9 798 aa13.24□□□□□ -0.29
RNF4-208ENST00000507247 FRYQ5TBA9 3013 aa13.23□□□□□ -0.29
RNF4-208ENST00000507247 WDFY3Q8IZQ1 3526 aa13.23□□□□□ -0.29
RNF4-208ENST00000507247 SYNDIG1LA6NDD5 238 aa13.23□□□□□ -0.29
RNF4-208ENST00000507247 UPK1AO00322 258 aa13.23□□□□□ -0.29
RNF4-208ENST00000507247 PLOD2O00469 737 aa13.23□□□□□ -0.29
RNF4-208ENST00000507247 ERN1O75460 977 aaKnown RBP13.23□□□□□ -0.29
RNF4-208ENST00000507247 CREG1O75629 220 aa13.23□□□□□ -0.29
RNF4-208ENST00000507247 DDAH2O95865 285 aa13.23□□□□□ -0.29
RNF4-208ENST00000507247 CBX7O95931 251 aa13.23□□□□□ -0.29
RNF4-208ENST00000507247 IGHEP01854 428 aa13.23□□□□□ -0.29
RNF4-208ENST00000507247 CLPSP04118 112 aa13.23□□□□□ -0.29
RNF4-208ENST00000507247 ZCCHC18P0CG32 403 aa13.23□□□□□ -0.29
RNF4-208ENST00000507247 COX6A1P12074 109 aa13.23□□□□□ -0.29
RNF4-208ENST00000507247 TNNI3P19429 210 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms