RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 FANCFQ9NPI8 374 aa6.47□□□□□ -1.37
VCAN-207ENST00000507162 SERHLQ9NQF3 203 aa6.47□□□□□ -1.37
VCAN-207ENST00000507162 WWOXQ9NZC7 414 aa6.47□□□□□ -1.37
VCAN-207ENST00000507162 PTBP2Q9UKA9 531 aaKnown RBP6.47□□□□□ -1.37
VCAN-207ENST00000507162 RNF112Q9ULX5 631 aa6.47□□□□□ -1.37
VCAN-207ENST00000507162 PCDHB10Q9UN67 800 aa6.47□□□□□ -1.37
VCAN-207ENST00000507162 CRYL1Q9Y2S2 319 aa6.47□□□□□ -1.37
VCAN-207ENST00000507162 BZW2Q9Y6E2 419 aaKnown RBP6.47□□□□□ -1.37
VCAN-207ENST00000507162 hCG_1818297A0A087WSY0 165 aa6.46□□□□□ -1.38
VCAN-207ENST00000507162 IGHV4-61A0A0C4DH41 118 aa6.46□□□□□ -1.38
VCAN-207ENST00000507162 IQANK1A0A1B0GTG1 560 aa6.46□□□□□ -1.38
VCAN-207ENST00000507162 GOLGA6L9A6NEM1 432 aa6.46□□□□□ -1.38
VCAN-207ENST00000507162 HRKO00198 91 aa6.46□□□□□ -1.38
VCAN-207ENST00000507162 CYR61O00622 381 aa6.46□□□□□ -1.38
VCAN-207ENST00000507162 PSMD3O43242 534 aa6.46□□□□□ -1.38
VCAN-207ENST00000507162 HCRTR2O43614 444 aa6.46□□□□□ -1.38
VCAN-207ENST00000507162 DYRK3O43781 588 aa6.46□□□□□ -1.38
VCAN-207ENST00000507162 SPOPO43791 374 aa6.46□□□□□ -1.38
VCAN-207ENST00000507162 B3GALT2O43825 422 aa6.46□□□□□ -1.38
VCAN-207ENST00000507162 METTL18O95568 372 aa6.46□□□□□ -1.38
VCAN-207ENST00000507162 COX7A2P14406 83 aa6.46□□□□□ -1.38
VCAN-207ENST00000507162 SKIV2L2P42285 1042 aaKnown RBP6.46□□□□□ -1.38
VCAN-207ENST00000507162 NEK2P51955 445 aa6.46□□□□□ -1.38
VCAN-207ENST00000507162 PLA2G16P53816 162 aa6.46□□□□□ -1.38
VCAN-207ENST00000507162 CLDN18P56856 261 aa6.46□□□□□ -1.38
VCAN-207ENST00000507162 SERTAD2Q14140 314 aa6.46□□□□□ -1.38
VCAN-207ENST00000507162 CSHL1Q14406 222 aa6.46□□□□□ -1.38
VCAN-207ENST00000507162 FGFBP1Q14512 234 aa6.46□□□□□ -1.38
VCAN-207ENST00000507162 EFTUD2Q15029 972 aaKnown RBP eCLIP6.46□□□□□ -1.38
VCAN-207ENST00000507162 PPP4R4Q6NUP7 873 aa6.46□□□□□ -1.38
VCAN-207ENST00000507162 AAGABQ6PD74 315 aa6.46□□□□□ -1.38
VCAN-207ENST00000507162 AGTRAPQ6RW13 159 aa6.46□□□□□ -1.38
VCAN-207ENST00000507162 LCTLQ6UWM7 567 aa6.46□□□□□ -1.38
VCAN-207ENST00000507162 DNAJC14Q6Y2X3 702 aaPredicted RBP6.46□□□□□ -1.38
VCAN-207ENST00000507162 PPP1R21Q6ZMI0 780 aa6.46□□□□□ -1.38
VCAN-207ENST00000507162 MBOAT1Q6ZNC8 495 aa6.46□□□□□ -1.38
VCAN-207ENST00000507162 SDCCAG8Q86SQ7 713 aaPredicted RBP6.46□□□□□ -1.38
VCAN-207ENST00000507162 LINC00523Q86TU6 105 aa6.46□□□□□ -1.38
VCAN-207ENST00000507162 DTX2Q86UW9 622 aa6.46□□□□□ -1.38
VCAN-207ENST00000507162 IFNEQ86WN2 208 aa6.46□□□□□ -1.38
VCAN-207ENST00000507162 OR4N5Q8IXE1 308 aa6.46□□□□□ -1.38
VCAN-207ENST00000507162 TAGAPQ8N103 731 aa6.46□□□□□ -1.38
VCAN-207ENST00000507162 TRPV3Q8NET8 790 aa6.46□□□□□ -1.38
VCAN-207ENST00000507162 ABHD11Q8NFV4 315 aa6.46□□□□□ -1.38
VCAN-207ENST00000507162 OR4K1Q8NGD4 311 aa6.46□□□□□ -1.38
VCAN-207ENST00000507162 ACTL9Q8TC94 416 aa6.46□□□□□ -1.38
VCAN-207ENST00000507162 CCT6BQ92526 530 aa6.46□□□□□ -1.38
VCAN-207ENST00000507162 S100PBPQ96BU1 408 aa6.46□□□□□ -1.38
VCAN-207ENST00000507162 SNF8Q96H20 258 aa6.46□□□□□ -1.38
VCAN-207ENST00000507162 TMEM41AQ96HV5 264 aa6.46□□□□□ -1.38
VCAN-207ENST00000507162 SFXN2Q96NB2 322 aa6.46□□□□□ -1.38
VCAN-207ENST00000507162 FOXN4Q96NZ1 517 aa6.46□□□□□ -1.38
VCAN-207ENST00000507162 HAUS8Q9BT25 410 aa6.46□□□□□ -1.38
VCAN-207ENST00000507162 SOX7Q9BT81 388 aa6.46□□□□□ -1.38
VCAN-207ENST00000507162 NPLQ9BXD5 320 aaPredicted RBP6.46□□□□□ -1.38
VCAN-207ENST00000507162 PINK1Q9BXM7 581 aa6.46□□□□□ -1.38
VCAN-207ENST00000507162 TRIM2Q9C040 744 aa6.46□□□□□ -1.38
VCAN-207ENST00000507162 GRIP2Q9C0E4 1043 aa6.46□□□□□ -1.38
VCAN-207ENST00000507162 SPNS1Q9H2V7 528 aa6.46□□□□□ -1.38
VCAN-207ENST00000507162 METTL7AQ9H8H3 244 aa6.46□□□□□ -1.38
VCAN-207ENST00000507162 ARL15Q9NXU5 204 aa6.46□□□□□ -1.38
VCAN-207ENST00000507162 TAS2R10Q9NYW0 307 aa6.46□□□□□ -1.38
VCAN-207ENST00000507162 TENM3Q9P273 2699 aa6.45□□□□□ -1.38
VCAN-207ENST00000507162 SYNDIG1LA6NDD5 238 aa6.45□□□□□ -1.38
VCAN-207ENST00000507162 DPRXA6NFQ7 191 aa6.45□□□□□ -1.38
VCAN-207ENST00000507162 H3BMM5 538 aa6.45□□□□□ -1.38
VCAN-207ENST00000507162 APOC4-APOC2K7ER74 178 aa6.45□□□□□ -1.38
VCAN-207ENST00000507162 ERI3O43414 337 aaKnown RBP6.45□□□□□ -1.38
VCAN-207ENST00000507162 CBR3O75828 277 aa6.45□□□□□ -1.38
VCAN-207ENST00000507162 APOC2P02655 101 aa6.45□□□□□ -1.38
VCAN-207ENST00000507162 SERPING1P05155 500 aa6.45□□□□□ -1.38
VCAN-207ENST00000507162 SERPINA6P08185 405 aa6.45□□□□□ -1.38
VCAN-207ENST00000507162 CSF3P09919 207 aa6.45□□□□□ -1.38
VCAN-207ENST00000507162 ARAFP10398 606 aa6.45□□□□□ -1.38
VCAN-207ENST00000507162 ZNF708P17019 499 aa6.45□□□□□ -1.38
VCAN-207ENST00000507162 COMTP21964 271 aa6.45□□□□□ -1.38
VCAN-207ENST00000507162 AHRP35869 848 aa6.45□□□□□ -1.38
VCAN-207ENST00000507162 NR4A2P43354 598 aa6.45□□□□□ -1.38
VCAN-207ENST00000507162 PDLIM4P50479 330 aa6.45□□□□□ -1.38
VCAN-207ENST00000507162 CDH11P55287 796 aa6.45□□□□□ -1.38
VCAN-207ENST00000507162 STXBP1P61764 594 aaKnown RBP6.45□□□□□ -1.38
VCAN-207ENST00000507162 RPP38P78345 283 aaKnown RBP6.45□□□□□ -1.38
VCAN-207ENST00000507162 IRF9Q00978 393 aa6.45□□□□□ -1.38
VCAN-207ENST00000507162 ACVR1Q04771 509 aa6.45□□□□□ -1.38
VCAN-207ENST00000507162 BSPH1Q075Z2 132 aa6.45□□□□□ -1.38
VCAN-207ENST00000507162 ZNF844Q08AG5 666 aa6.45□□□□□ -1.38
VCAN-207ENST00000507162 CDH17Q12864 832 aa6.45□□□□□ -1.38
VCAN-207ENST00000507162 RPS6KA2Q15349 733 aa6.45□□□□□ -1.38
VCAN-207ENST00000507162 TSC22D1Q15714 1073 aa6.45□□□□□ -1.38
VCAN-207ENST00000507162 TTLL9Q3SXZ7 439 aa6.45□□□□□ -1.38
VCAN-207ENST00000507162 CYHR1Q6ZMK1 362 aa6.45□□□□□ -1.38
VCAN-207ENST00000507162 FAM214BQ7L5A3 538 aa6.45□□□□□ -1.38
VCAN-207ENST00000507162 APTXQ7Z2E3 356 aaKnown RBP6.45□□□□□ -1.38
VCAN-207ENST00000507162 STRA8Q7Z7C7 330 aa6.45□□□□□ -1.38
VCAN-207ENST00000507162 KLHDC8AQ8IYD2 350 aa6.45□□□□□ -1.38
VCAN-207ENST00000507162 RCOR2Q8IZ40 523 aa6.45□□□□□ -1.38
VCAN-207ENST00000507162 PRR22Q8IZ63 422 aa6.45□□□□□ -1.38
VCAN-207ENST00000507162 ANKRD53Q8N9V6 530 aa6.45□□□□□ -1.38
VCAN-207ENST00000507162 FAM71DQ8N9W8 422 aa6.45□□□□□ -1.38
VCAN-207ENST00000507162 FNDC9Q8TBE3 224 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms