RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 ADGRF3Q8IZF5 1079 aa16.23■□□□□ 0.19
SQSTM1-211ENST00000506690 GPR26Q8NDV2 337 aa16.23■□□□□ 0.19
SQSTM1-211ENST00000506690 GPR156Q8NFN8 814 aa16.23■□□□□ 0.19
SQSTM1-211ENST00000506690 OR5AK3PQ8NH89 298 aa16.23■□□□□ 0.19
SQSTM1-211ENST00000506690 TOE1Q96GM8 510 aaKnown RBP16.23■□□□□ 0.19
SQSTM1-211ENST00000506690 LRR1Q96L50 414 aa16.23■□□□□ 0.19
SQSTM1-211ENST00000506690 FGF20Q9NP95 211 aaPredicted RBP16.23■□□□□ 0.19
SQSTM1-211ENST00000506690 ZNF224Q9NZL3 707 aa16.23■□□□□ 0.19
SQSTM1-211ENST00000506690 VWA8A3KMH1 1905 aa16.22■□□□□ 0.19
SQSTM1-211ENST00000506690 SLC9A3R1O14745 358 aaPredicted RBP16.22■□□□□ 0.19
SQSTM1-211ENST00000506690 NCR1O76036 304 aa16.22■□□□□ 0.19
SQSTM1-211ENST00000506690 ALDH1A1P00352 501 aa16.22■□□□□ 0.19
SQSTM1-211ENST00000506690 CFL1P23528 166 aaKnown RBP16.22■□□□□ 0.19
SQSTM1-211ENST00000506690 STOMP27105 288 aa16.22■□□□□ 0.19
SQSTM1-211ENST00000506690 SRP54P61011 504 aaKnown RBP16.22■□□□□ 0.19
SQSTM1-211ENST00000506690 BAMBIQ13145 260 aa16.22■□□□□ 0.19
SQSTM1-211ENST00000506690 IRF5Q13568 498 aa16.22■□□□□ 0.19
SQSTM1-211ENST00000506690 EXOSC2Q13868 293 aaKnown RBP16.22■□□□□ 0.19
SQSTM1-211ENST00000506690 SNAPC1Q16533 368 aa16.22■□□□□ 0.19
SQSTM1-211ENST00000506690 MPEG1Q2M385 716 aa16.22■□□□□ 0.19
SQSTM1-211ENST00000506690 TCTN3Q6NUS6 607 aa16.22■□□□□ 0.19
SQSTM1-211ENST00000506690 UNC5DQ6UXZ4 953 aa16.22■□□□□ 0.19
SQSTM1-211ENST00000506690 ARIH2OSQ8N7S6 290 aa16.22■□□□□ 0.19
SQSTM1-211ENST00000506690 OR6K2Q8NGY2 324 aa16.22■□□□□ 0.19
SQSTM1-211ENST00000506690 CIDECQ96AQ7 238 aaPredicted RBP16.22■□□□□ 0.19
SQSTM1-211ENST00000506690 ADAM2Q99965 735 aa16.22■□□□□ 0.19
SQSTM1-211ENST00000506690 AP5M1Q9H0R1 490 aa16.22■□□□□ 0.19
SQSTM1-211ENST00000506690 SGK2Q9HBY8 427 aa16.22■□□□□ 0.19
SQSTM1-211ENST00000506690 GULP1Q9UBP9 304 aa16.22■□□□□ 0.19
SQSTM1-211ENST00000506690 MBD1Q9UIS9 605 aaPredicted RBP16.22■□□□□ 0.19
SQSTM1-211ENST00000506690 RNF215Q9Y6U7 377 aa16.22■□□□□ 0.19
SQSTM1-211ENST00000506690 SHISA3A0PJX4 238 aa16.21■□□□□ 0.19
SQSTM1-211ENST00000506690 MANSC4A6NHS7 340 aaPredicted RBP16.21■□□□□ 0.19
SQSTM1-211ENST00000506690 GPR37L1O60883 481 aa16.21■□□□□ 0.19
SQSTM1-211ENST00000506690 CHI3L1P36222 383 aaPredicted RBP16.21■□□□□ 0.19
SQSTM1-211ENST00000506690 TYW3Q6IPR3 259 aaKnown RBP16.21■□□□□ 0.19
SQSTM1-211ENST00000506690 USP45Q70EL2 814 aa16.21■□□□□ 0.19
SQSTM1-211ENST00000506690 THOC6Q86W42 341 aaKnown RBP16.21■□□□□ 0.19
SQSTM1-211ENST00000506690 ADGRG3Q86Y34 549 aa16.21■□□□□ 0.19
SQSTM1-211ENST00000506690 SLC30A8Q8IWU4 369 aa16.21■□□□□ 0.19
SQSTM1-211ENST00000506690 SLC43A3Q8NBI5 491 aa16.21■□□□□ 0.19
SQSTM1-211ENST00000506690 SEPT5Q99719 369 aaPredicted RBP16.21■□□□□ 0.19
SQSTM1-211ENST00000506690 ARHGAP9Q9BRR9 750 aa16.21■□□□□ 0.19
SQSTM1-211ENST00000506690 FUZQ9BT04 418 aa16.21■□□□□ 0.19
SQSTM1-211ENST00000506690 RSPO3Q9BXY4 272 aaPredicted RBP16.21■□□□□ 0.19
SQSTM1-211ENST00000506690 TAS2R7Q9NYW3 318 aa16.21■□□□□ 0.19
SQSTM1-211ENST00000506690 ADAM30Q9UKF2 790 aa16.21■□□□□ 0.19
SQSTM1-211ENST00000506690 NOD1Q9Y239 953 aa16.21■□□□□ 0.19
SQSTM1-211ENST00000506690 STON1Q9Y6Q2 735 aa16.21■□□□□ 0.19
SQSTM1-211ENST00000506690 A8MUA0 341 aa16.21■□□□□ 0.19
SQSTM1-211ENST00000506690 SLC19A2O60779 497 aa16.21■□□□□ 0.19
SQSTM1-211ENST00000506690 PAHP00439 452 aa16.21■□□□□ 0.19
SQSTM1-211ENST00000506690 IFNA7P01567 189 aa16.21■□□□□ 0.19
SQSTM1-211ENST00000506690 SRPRAP08240 638 aaKnown RBP16.21■□□□□ 0.19
SQSTM1-211ENST00000506690 HOXD4P09016 255 aaPredicted RBP16.21■□□□□ 0.19
SQSTM1-211ENST00000506690 OR56A5P0C7T3 313 aa16.21■□□□□ 0.19
SQSTM1-211ENST00000506690 ANXA3P12429 323 aa16.21■□□□□ 0.19
SQSTM1-211ENST00000506690 RAB40BQ12829 278 aa16.21■□□□□ 0.19
SQSTM1-211ENST00000506690 FGFBP1Q14512 234 aa16.21■□□□□ 0.19
SQSTM1-211ENST00000506690 CTXN3Q4LDR2 81 aa16.21■□□□□ 0.19
SQSTM1-211ENST00000506690 GDF6Q6KF10 455 aaPredicted RBP16.21■□□□□ 0.19
SQSTM1-211ENST00000506690 ZNF485Q8NCK3 441 aa16.21■□□□□ 0.19
SQSTM1-211ENST00000506690 HGDQ93099 445 aa16.21■□□□□ 0.19
SQSTM1-211ENST00000506690 UBL7Q96S82 380 aaPredicted RBP16.21■□□□□ 0.19
SQSTM1-211ENST00000506690 ZNF222Q9UK12 451 aa16.21■□□□□ 0.19
SQSTM1-211ENST00000506690 A8MX80 341 aa16.2■□□□□ 0.18
SQSTM1-211ENST00000506690 INPPL1O15357 1258 aa16.2■□□□□ 0.18
SQSTM1-211ENST00000506690 GJB5O95377 273 aa16.2■□□□□ 0.18
SQSTM1-211ENST00000506690 MPC2O95563 127 aa16.2■□□□□ 0.18
SQSTM1-211ENST00000506690 DHFRP00374 187 aa16.2■□□□□ 0.18
SQSTM1-211ENST00000506690 H1F0P07305 194 aaKnown RBP16.2■□□□□ 0.18
SQSTM1-211ENST00000506690 ACP2P11117 423 aa16.2■□□□□ 0.18
SQSTM1-211ENST00000506690 DGKGP49619 791 aa16.2■□□□□ 0.18
SQSTM1-211ENST00000506690 PDE7AQ13946 482 aa16.2■□□□□ 0.18
SQSTM1-211ENST00000506690 CCDC85BQ15834 202 aaPredicted RBP16.2■□□□□ 0.18
SQSTM1-211ENST00000506690 REEP3Q6NUK4 255 aa16.2■□□□□ 0.18
SQSTM1-211ENST00000506690 C16orf62Q7Z3J2 963 aa16.2■□□□□ 0.18
SQSTM1-211ENST00000506690 FBXO22Q8NEZ5 403 aa16.2■□□□□ 0.18
SQSTM1-211ENST00000506690 GPR32P1Q8NGA4 272 aa16.2■□□□□ 0.18
SQSTM1-211ENST00000506690 TM6SF2Q9BZW4 377 aa16.2■□□□□ 0.18
SQSTM1-211ENST00000506690 RNF32Q9H0A6 362 aa16.2■□□□□ 0.18
SQSTM1-211ENST00000506690 SEMA3GQ9NS98 782 aa16.2■□□□□ 0.18
SQSTM1-211ENST00000506690 RABL2BQ9UNT1 228 aa16.2■□□□□ 0.18
SQSTM1-211ENST00000506690 IGLV3-16A0A075B6K0 115 aa16.2■□□□□ 0.18
SQSTM1-211ENST00000506690 TMEM189-UBE2V1I3L0A0 370 aa16.2■□□□□ 0.18
SQSTM1-211ENST00000506690 LANCL1O43813 399 aa16.2■□□□□ 0.18
SQSTM1-211ENST00000506690 LZTS3O60299 673 aaPredicted RBP16.2■□□□□ 0.18
SQSTM1-211ENST00000506690 VNN2O95498 520 aa16.2■□□□□ 0.18
SQSTM1-211ENST00000506690 FURINP09958 794 aa16.2■□□□□ 0.18
SQSTM1-211ENST00000506690 ELK1P19419 428 aa16.2■□□□□ 0.18
SQSTM1-211ENST00000506690 CCND3P30281 292 aaPredicted RBP16.2■□□□□ 0.18
SQSTM1-211ENST00000506690 BTCP35070 178 aa16.2■□□□□ 0.18
SQSTM1-211ENST00000506690 PTPN5P54829 565 aa16.2■□□□□ 0.18
SQSTM1-211ENST00000506690 ZNF763Q0D2J5 394 aa16.2■□□□□ 0.18
SQSTM1-211ENST00000506690 LGALSLQ3ZCW2 172 aaPredicted RBP16.2■□□□□ 0.18
SQSTM1-211ENST00000506690 ATP13A5Q4VNC0 1218 aa16.2■□□□□ 0.18
SQSTM1-211ENST00000506690 CD276Q5ZPR3 534 aa16.2■□□□□ 0.18
SQSTM1-211ENST00000506690 TSPAN33Q86UF1 283 aa16.2■□□□□ 0.18
SQSTM1-211ENST00000506690 OR7G3Q8NG95 312 aa16.2■□□□□ 0.18
SQSTM1-211ENST00000506690 TEFMQ96QE5 360 aaKnown RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms