RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 BHLHA9Q7RTU4 235 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 PPP1R42Q7Z4L9 355 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 RNF148Q8N7C7 305 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 OR4D10Q8NGI6 311 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 CD99L2Q8TCZ2 262 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 ZNRF4Q8WWF5 429 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 CASP10Q92851 521 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 OMA1Q96E52 524 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 SENP5Q96HI0 755 aaPredicted RBP2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 RPGRIP1Q96KN7 1286 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 NECTIN4Q96NY8 510 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 CTAGE1Q96RT6 745 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 S1PR3Q99500 378 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 EPYCQ99645 322 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 NUSAP1Q9BXS6 441 aaKnown RBP2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 TDRD1Q9BXT4 1180 aaKnown RBP2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 ATP13A3Q9H7F0 1226 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 ZNF665Q9H7R5 613 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 ZNF334Q9HCZ1 680 aaPredicted RBP2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 MAN2C1Q9NTJ4 1040 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 CNOT2Q9NZN8 540 aaKnown RBP2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 VPS54Q9P1Q0 977 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 ZNF319Q9P2F9 582 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 CLIP2Q9UDT6 1046 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 EPHA6Q9UF33 1036 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 C2CD2Q9Y426 696 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 KIF3AQ9Y496 699 aa2.84□□□□□ -1.95
TRAPPC11-205ENST00000506426 STK36Q9NRP7 1315 aa2.84□□□□□ -1.96
TRAPPC11-205ENST00000506426 A0A0U1RRA0 63 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 SERINC4A6NH21 518 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 YJEFN3A6XGL0 299 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 TCP10L2B9ZVM9 353 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 SLC1A7O00341 560 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 CCSO14618 274 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 PCDH7O60245 1069 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 PEX11AO75192 247 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 TRMUO75648 421 aaKnown RBP2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 CDC123O75794 336 aaPredicted RBP2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 UFL1O94874 794 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 AP2A2O94973 939 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 SYNGR4O95473 234 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 TXNDC12O95881 172 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 APRTP07741 180 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 HIST1H2AGP0C0S8 130 aaPredicted RBP2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 TPBGLP0DKB5 382 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 RALAP11233 206 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 PKLRP30613 574 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 AKT2P31751 481 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 OR1D2P34982 312 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 FEN1P39748 380 aaKnown RBP2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 MTTPP55157 894 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 ERVFC1-1P60608 527 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 SCGB2A2Q13296 93 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 MSLNQ13421 630 aaPredicted RBP2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 DRP2Q13474 957 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 FHL1Q13642 323 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 TRADDQ15628 312 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 FAM106AQ4KMX7 169 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 MPPE1Q53F39 396 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 CMPK2Q5EBM0 449 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 ATP1A1-AS1Q5TC04 95 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 TMEM26Q6ZUK4 368 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 TRMT1LQ7Z2T5 733 aaKnown RBP2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 LSMEM2Q8N112 164 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 CCDC197Q8NCU1 140 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 FAM71CQ8NEG0 241 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 OR5T2Q8NGG2 359 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 OR56B1Q8NGI3 324 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 OR6M1Q8NGM8 313 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 OR10G8Q8NGN5 311 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 OR2T11Q8NH01 316 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 OR4L1Q8NH43 312 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 SMPDL3AQ92484 453 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 FCGR1BQ92637 280 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 HIST1H2ACQ93077 130 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 RAB39BQ96DA2 213 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 C16orf58Q96GQ5 468 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 CXorf58Q96LI9 332 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 LURAP1Q96LR2 239 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 TAAR6Q96RI8 345 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 AGPAT1Q99943 283 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 PIGQQ9BRB3 760 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 WACQ9BTA9 647 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 FUNDC2Q9BWH2 189 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 SIRPDQ9H106 197 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 MMP28Q9H239 520 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 TMEM231Q9H6L2 316 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 S100A14Q9HCY8 104 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 HPS4Q9NQG7 708 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 FAM212BQ9NTI7 297 aaPredicted RBP2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 ZNF624Q9P2J8 865 aaPredicted RBP2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 ANKMY1Q9P2S6 941 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 ERVK-18Q9QC07 812 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 MRTO4Q9UKD2 239 aaKnown RBP2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 OR1A2Q9Y585 309 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 SCN4AP35499 1836 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 CCDC88AQ3V6T2 1871 aa2.83□□□□□ -1.96
TRAPPC11-205ENST00000506426 MYH15Q9Y2K3 1946 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms