RNA–Protein interactions for RNA: ENST00000504554.1

RFC1-207, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-207ENST00000504554 CLCA3PQ9Y6N3 262 aa7.42□□□□□ -1.22
RFC1-207ENST00000504554 USP9XQ93008 2570 aaPredicted RBP7.42□□□□□ -1.22
RFC1-207ENST00000504554 HECTD1Q9ULT8 2610 aa7.42□□□□□ -1.22
RFC1-207ENST00000504554 FLNBO75369 2602 aaKnown RBP7.41□□□□□ -1.22
RFC1-207ENST00000504554 TLDC2A0PJX2 215 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 J3QW42 95 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 GLRA3O75311 464 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 ZFAND5O76080 213 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 AGFG2O95081 481 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 SLU7O95391 586 aaKnown RBP7.41□□□□□ -1.22
RFC1-207ENST00000504554 LDLRP01130 860 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 NUDT17P0C025 328 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 NR2F6P10588 404 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 MYL2P10916 166 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 ALOX15P16050 662 aaPredicted RBP7.41□□□□□ -1.22
RFC1-207ENST00000504554 KRT15P19012 456 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 SERPINB3P29508 390 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 RFC3P40938 356 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 SOX3P41225 446 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 CYB561P49447 251 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 NAGLUP54802 743 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 GPR85P60893 370 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 ERVK-8P63133 956 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 RNF4P78317 190 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 PHEXP78562 749 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 HSF1Q00613 529 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 HMGCS1Q01581 520 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 MGAT2Q10469 447 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 LCP2Q13094 533 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 DUSP8Q13202 625 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 SERTAD2Q14140 314 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 RCN2Q14257 317 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 INAQ16352 499 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 MAPKAPK3Q16644 382 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 PRSS53Q2L4Q9 553 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 ERCC6LQ2NKX8 1250 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 CCNYL2Q5T2Q4 361 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 NDUFAF5Q5TEU4 345 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 WDR93Q6P2C0 686 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 CYP20A1Q6UW02 462 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 HSDL2Q6YN16 418 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 FGD2Q7Z6J4 655 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 TRABD2AQ86V40 505 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 LCA5Q86VQ0 697 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 SLC22A9Q8IVM8 553 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 C10orf107Q8IVU9 208 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 SULF2Q8IWU5 870 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 C1orf52Q8N6N3 182 aaKnown RBP7.41□□□□□ -1.22
RFC1-207ENST00000504554 CCNYL1Q8N7R7 359 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 SUN3Q8TAQ9 357 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 CHTF18Q8WVB6 975 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.41□□□□□ -1.223e-6■■■■■ 50.8
RFC1-207ENST00000504554 DAZLQ92904 295 aaKnown RBP7.41□□□□□ -1.22
RFC1-207ENST00000504554 APIPQ96GX9 242 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 DGAT2Q96PD7 388 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 CCDC77Q9BR77 488 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 CENPKQ9BS16 269 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 PARD6BQ9BYG5 372 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 SHCBP1LQ9BZQ2 653 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 MS4A12Q9NXJ0 267 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 SLC17A7Q9P2U7 560 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 HEY2Q9UBP5 337 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 PHF11Q9UIL8 331 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 ADAM29Q9UKF5 820 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 ERVK-19Q9WJR5 959 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 PCDHA9Q9Y5H5 950 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 PTGDR2Q9Y5Y4 395 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 SPACA6W5XKT8 324 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 CSMD1Q96PZ7 3565 aa7.41□□□□□ -1.22
RFC1-207ENST00000504554 SETXQ7Z333 2677 aaKnown RBP7.41□□□□□ -1.22
RFC1-207ENST00000504554 PRRC2CQ9Y520 2896 aaKnown RBP7.41□□□□□ -1.22
RFC1-207ENST00000504554 A0A096LPE4 126 aa7.4□□□□□ -1.22
RFC1-207ENST00000504554 A0A1W2PPZ6 126 aa7.4□□□□□ -1.22
RFC1-207ENST00000504554 A1L4Q6 167 aa7.4□□□□□ -1.22
RFC1-207ENST00000504554 G3V3Y1 287 aa7.4□□□□□ -1.22
RFC1-207ENST00000504554 FCHO1O14526 889 aa7.4□□□□□ -1.22
RFC1-207ENST00000504554 COPEO14579 308 aa7.4□□□□□ -1.22
RFC1-207ENST00000504554 LRRTM2O43300 516 aa7.4□□□□□ -1.22
RFC1-207ENST00000504554 CDH16O75309 829 aa7.4□□□□□ -1.22
RFC1-207ENST00000504554 SPAG7O75391 227 aa7.4□□□□□ -1.22
RFC1-207ENST00000504554 UNC5CO95185 931 aa7.4□□□□□ -1.22
RFC1-207ENST00000504554 ESRRBO95718 433 aa7.4□□□□□ -1.22
RFC1-207ENST00000504554 CLDN1O95832 211 aa7.4□□□□□ -1.22
RFC1-207ENST00000504554 STSP08842 583 aa7.4□□□□□ -1.22
RFC1-207ENST00000504554 SLC35E2P0CK97 266 aa7.4□□□□□ -1.22
RFC1-207ENST00000504554 S1PR1P21453 382 aa7.4□□□□□ -1.22
RFC1-207ENST00000504554 TLX1P31314 330 aaPredicted RBP7.4□□□□□ -1.22
RFC1-207ENST00000504554 SSTR4P31391 388 aa7.4□□□□□ -1.22
RFC1-207ENST00000504554 ARRB2P32121 409 aa7.4□□□□□ -1.22
RFC1-207ENST00000504554 BUD31P41223 144 aaPredicted RBP7.4□□□□□ -1.22
RFC1-207ENST00000504554 MEOX1P50221 254 aa7.4□□□□□ -1.22
RFC1-207ENST00000504554 SSR4P51571 173 aa7.4□□□□□ -1.22
RFC1-207ENST00000504554 SLC37A1P57057 533 aa7.4□□□□□ -1.22
RFC1-207ENST00000504554 DNAJB13P59910 316 aa7.4□□□□□ -1.22
RFC1-207ENST00000504554 ASPHQ12797 758 aa7.4□□□□□ -1.22
RFC1-207ENST00000504554 ZNF267Q14586 743 aaPredicted RBP7.4□□□□□ -1.22
RFC1-207ENST00000504554 PCLAFQ15004 111 aa7.4□□□□□ -1.22
RFC1-207ENST00000504554 SPRED3Q2MJR0 410 aa7.4□□□□□ -1.22
RFC1-207ENST00000504554 PIGGQ5H8A4 983 aa7.4□□□□□ -1.22
RFC1-207ENST00000504554 C1QL3Q5VWW1 255 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms