RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 CXorf21Q9HAI6 301 aa12.37□□□□□ -0.43
PDLIM7-212ENST00000504380 ATP13A2Q9NQ11 1180 aa12.37□□□□□ -0.43
PDLIM7-212ENST00000504380 TAS2R7Q9NYW3 318 aa12.37□□□□□ -0.43
PDLIM7-212ENST00000504380 ZNF223Q9UK11 482 aaPredicted RBP12.37□□□□□ -0.43
PDLIM7-212ENST00000504380 ERVK-19Q9WJR5 959 aa12.37□□□□□ -0.43
PDLIM7-212ENST00000504380 PCDH17O14917 1159 aa12.36□□□□□ -0.43
PDLIM7-212ENST00000504380 PRKNO60260 465 aaPredicted RBP12.36□□□□□ -0.43
PDLIM7-212ENST00000504380 SLC22A3O75751 556 aa12.36□□□□□ -0.43
PDLIM7-212ENST00000504380 ITGA3P26006 1051 aa12.36□□□□□ -0.43
PDLIM7-212ENST00000504380 NTSP30990 170 aa12.36□□□□□ -0.43
PDLIM7-212ENST00000504380 ZFP36L2P47974 494 aaKnown RBP12.36□□□□□ -0.43
PDLIM7-212ENST00000504380 CDK9P50750 372 aaKnown RBP12.36□□□□□ -0.43
PDLIM7-212ENST00000504380 GPR143P51810 404 aa12.36□□□□□ -0.43
PDLIM7-212ENST00000504380 WNT3P56703 355 aa12.36□□□□□ -0.43
PDLIM7-212ENST00000504380 C21orf58P58505 322 aa12.36□□□□□ -0.43
PDLIM7-212ENST00000504380 STX1BP61266 288 aa12.36□□□□□ -0.43
PDLIM7-212ENST00000504380 HSPB3Q12988 150 aa12.36□□□□□ -0.43
PDLIM7-212ENST00000504380 EXOSC7Q15024 291 aaKnown RBP12.36□□□□□ -0.43
PDLIM7-212ENST00000504380 PRICKLE4Q2TBC4 344 aa12.36□□□□□ -0.43
PDLIM7-212ENST00000504380 FAM174BQ3ZCQ3 159 aa12.36□□□□□ -0.43
PDLIM7-212ENST00000504380 TRMT12Q53H54 448 aaKnown RBP12.36□□□□□ -0.43
PDLIM7-212ENST00000504380 FCRLBQ6BAA4 426 aa12.36□□□□□ -0.43
PDLIM7-212ENST00000504380 PLAG1Q6DJT9 500 aa12.36□□□□□ -0.43
PDLIM7-212ENST00000504380 ANKRD46Q86W74 232 aa12.36□□□□□ -0.43
PDLIM7-212ENST00000504380 GALNT12Q8IXK2 581 aa12.36□□□□□ -0.43
PDLIM7-212ENST00000504380 CLECL1Q8IZS7 167 aa12.36□□□□□ -0.43
PDLIM7-212ENST00000504380 FAM9CQ8IZT9 166 aa12.36□□□□□ -0.43
PDLIM7-212ENST00000504380 B3GNT7Q8NFL0 401 aa12.36□□□□□ -0.43
PDLIM7-212ENST00000504380 ZNF721Q8TF20 911 aa12.36□□□□□ -0.43
PDLIM7-212ENST00000504380 STON2Q8WXE9 905 aa12.36□□□□□ -0.43
PDLIM7-212ENST00000504380 MTERF3Q96E29 417 aa12.36□□□□□ -0.43
PDLIM7-212ENST00000504380 SENP5Q96HI0 755 aaPredicted RBP12.36□□□□□ -0.43
PDLIM7-212ENST00000504380 THOC3Q96J01 351 aaKnown RBP12.36□□□□□ -0.43
PDLIM7-212ENST00000504380 DUSP26Q9BV47 211 aa12.36□□□□□ -0.43
PDLIM7-212ENST00000504380 NSRP1Q9H0G5 558 aaKnown RBP12.36□□□□□ -0.43
PDLIM7-212ENST00000504380 EPN3Q9H201 632 aa12.36□□□□□ -0.43
PDLIM7-212ENST00000504380 ZNF385DQ9H6B1 395 aa12.36□□□□□ -0.43
PDLIM7-212ENST00000504380 LIN28AQ9H9Z2 209 aaKnown RBP12.36□□□□□ -0.43
PDLIM7-212ENST00000504380 SDR39U1Q9NRG7 319 aaPredicted RBP12.36□□□□□ -0.43
PDLIM7-212ENST00000504380 MAT2BQ9NZL9 334 aa12.36□□□□□ -0.43
PDLIM7-212ENST00000504380 TRBV11-1A0A0K0K1C0 115 aa12.35□□□□□ -0.43
PDLIM7-212ENST00000504380 A0A1W2PRB8 838 aa12.35□□□□□ -0.43
PDLIM7-212ENST00000504380 A8MUI8 341 aa12.35□□□□□ -0.43
PDLIM7-212ENST00000504380 SNX3O60493 162 aa12.35□□□□□ -0.43
PDLIM7-212ENST00000504380 CPSF4O95639 269 aaKnown RBP12.35□□□□□ -0.43
PDLIM7-212ENST00000504380 C6orf47O95873 294 aa12.35□□□□□ -0.43
PDLIM7-212ENST00000504380 CLPSP04118 112 aa12.35□□□□□ -0.43
PDLIM7-212ENST00000504380 ATP1B1P05026 303 aa12.35□□□□□ -0.43
PDLIM7-212ENST00000504380 ABCB1P08183 1280 aaPredicted RBP12.35□□□□□ -0.43
PDLIM7-212ENST00000504380 S1PR1P21453 382 aa12.35□□□□□ -0.43
PDLIM7-212ENST00000504380 S100A3P33764 101 aa12.35□□□□□ -0.43
PDLIM7-212ENST00000504380 MPIP34949 423 aa12.35□□□□□ -0.43
PDLIM7-212ENST00000504380 RPL3P39023 403 aaKnown RBP12.35□□□□□ -0.43
PDLIM7-212ENST00000504380 CLNS1AP54105 237 aaKnown RBP12.35□□□□□ -0.43
PDLIM7-212ENST00000504380 MANFP55145 182 aaKnown RBP12.35□□□□□ -0.43
PDLIM7-212ENST00000504380 AIMP2Q13155 320 aaKnown RBP12.35□□□□□ -0.43
PDLIM7-212ENST00000504380 DUSP8Q13202 625 aa12.35□□□□□ -0.43
PDLIM7-212ENST00000504380 BIKQ13323 160 aa12.35□□□□□ -0.43
PDLIM7-212ENST00000504380 UBAP2LQ14157 1087 aaKnown RBP12.35□□□□□ -0.43
PDLIM7-212ENST00000504380 SQLEQ14534 574 aa12.35□□□□□ -0.43
PDLIM7-212ENST00000504380 CEBPEQ15744 281 aa12.35□□□□□ -0.43
PDLIM7-212ENST00000504380 EXT1Q16394 746 aa12.35□□□□□ -0.43
PDLIM7-212ENST00000504380 AGKQ53H12 422 aa12.35□□□□□ -0.43
PDLIM7-212ENST00000504380 ZNF628Q5EBL2 1059 aa12.35□□□□□ -0.43
PDLIM7-212ENST00000504380 B3GNTL1Q67FW5 361 aaPredicted RBP12.35□□□□□ -0.43
PDLIM7-212ENST00000504380 TMEM107Q6UX40 140 aa12.35□□□□□ -0.43
PDLIM7-212ENST00000504380 C16orf47Q6ZP98 133 aaPredicted RBP12.35□□□□□ -0.43
PDLIM7-212ENST00000504380 GPR155Q7Z3F1 870 aa12.35□□□□□ -0.43
PDLIM7-212ENST00000504380 FUNDC1Q8IVP5 155 aa12.35□□□□□ -0.43
PDLIM7-212ENST00000504380 KBTBD2Q8IY47 623 aa12.35□□□□□ -0.43
PDLIM7-212ENST00000504380 SIRT6Q8N6T7 355 aa12.35□□□□□ -0.43
PDLIM7-212ENST00000504380 TMEM102Q8N9M5 508 aaPredicted RBP12.35□□□□□ -0.43
PDLIM7-212ENST00000504380 CLEC1AQ8NC01 280 aa12.35□□□□□ -0.43
PDLIM7-212ENST00000504380 APCDD1LQ8NCL9 501 aa12.35□□□□□ -0.43
PDLIM7-212ENST00000504380 MORN4Q8NDC4 146 aa12.35□□□□□ -0.43
PDLIM7-212ENST00000504380 OR7G2Q8NG99 324 aa12.35□□□□□ -0.43
PDLIM7-212ENST00000504380 OR14A16Q8NHC5 309 aa12.35□□□□□ -0.43
PDLIM7-212ENST00000504380 M1APQ8TC57 530 aa12.35□□□□□ -0.43
PDLIM7-212ENST00000504380 BRIX1Q8TDN6 353 aaKnown RBP12.35□□□□□ -0.43
PDLIM7-212ENST00000504380 THAP3Q8WTV1 239 aaPredicted RBP12.35□□□□□ -0.43
PDLIM7-212ENST00000504380 SNRNP27Q8WVK2 155 aaKnown RBP12.35□□□□□ -0.43
PDLIM7-212ENST00000504380 DAZLQ92904 295 aaKnown RBP12.35□□□□□ -0.43
PDLIM7-212ENST00000504380 VPS50Q96JG6 964 aa12.35□□□□□ -0.43
PDLIM7-212ENST00000504380 CCT8L2Q96SF2 557 aa12.35□□□□□ -0.43
PDLIM7-212ENST00000504380 ZBTB18Q99592 522 aa12.35□□□□□ -0.43
PDLIM7-212ENST00000504380 PRPF18Q99633 342 aaKnown RBP12.35□□□□□ -0.43
PDLIM7-212ENST00000504380 PELOQ9BRX2 385 aaKnown RBP12.35□□□□□ -0.43
PDLIM7-212ENST00000504380 ZIM2Q9NZV7 527 aa12.35□□□□□ -0.43
PDLIM7-212ENST00000504380 DOCK10Q96BY6 2186 aa12.35□□□□□ -0.43
PDLIM7-212ENST00000504380 NR5A2O00482 541 aa12.34□□□□□ -0.43
PDLIM7-212ENST00000504380 CFLARO15519 480 aa12.34□□□□□ -0.43
PDLIM7-212ENST00000504380 MAN1A2O60476 641 aa12.34□□□□□ -0.43
PDLIM7-212ENST00000504380 SHOX2O60902 331 aaPredicted RBP12.34□□□□□ -0.43
PDLIM7-212ENST00000504380 SERPINA7P05543 415 aa12.34□□□□□ -0.43
PDLIM7-212ENST00000504380 GALNSP34059 522 aa12.34□□□□□ -0.43
PDLIM7-212ENST00000504380 GPC1P35052 558 aa12.34□□□□□ -0.43
PDLIM7-212ENST00000504380 MC3RP41968 323 aa12.34□□□□□ -0.43
PDLIM7-212ENST00000504380 FRKP42685 505 aaPredicted RBP12.34□□□□□ -0.43
PDLIM7-212ENST00000504380 ATP4BP51164 291 aa12.34□□□□□ -0.43
PDLIM7-212ENST00000504380 POLR2JP52435 117 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms