RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 UGDHO60701 494 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 MYH1P12882 1939 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 PGCP20142 388 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 ERP29P30040 261 aaKnown RBP15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 UGT2B10P36537 528 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 GMPRP36959 345 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 KCNJ5P48544 419 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 RPL6Q02878 288 aaKnown RBP15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 RIPPLY1Q0D2K3 151 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 RUNX3Q13761 415 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 RAB12Q6IQ22 244 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 METTL2BQ6P1Q9 378 aaKnown RBP15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 GPAT4Q86UL3 456 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 TSPYL5Q86VY4 417 aaPredicted RBP15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 FKBP10Q96AY3 582 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 LRR1Q96L50 414 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 PREBQ9HCU5 417 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 MBLAC1A4D2B0 266 aaPredicted RBP15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 SH3D21A4FU49 640 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 AURKAO14965 403 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 PRKYO43930 277 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 STSP08842 583 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 GSTM2P28161 218 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 RPS26P62854 115 aaKnown RBP15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 GBX1Q14549 363 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 LRRTM3Q86VH5 581 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 TESCQ96BS2 214 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 ECHDC3Q96DC8 303 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 CCDC120Q96HB5 630 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 SDR39U1Q9NRG7 319 aaPredicted RBP15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 HSPB11Q9Y547 144 aa15.78■□□□□ 0.12
PCDHA1-203ENST00000504120 DUX1O43812 170 aa15.77■□□□□ 0.12
PCDHA1-203ENST00000504120 RBBP9O75884 186 aa15.77■□□□□ 0.12
PCDHA1-203ENST00000504120 CSF2P04141 144 aa15.77■□□□□ 0.12
PCDHA1-203ENST00000504120 SRCP12931 536 aa15.77■□□□□ 0.12
PCDHA1-203ENST00000504120 ATF4P18848 351 aaPredicted RBP15.77■□□□□ 0.12
PCDHA1-203ENST00000504120 ALG10Q5BKT4 473 aa15.77■□□□□ 0.12
PCDHA1-203ENST00000504120 LHFPL3Q86UP9 236 aa15.77■□□□□ 0.12
PCDHA1-203ENST00000504120 SCML4Q8N228 414 aa15.77■□□□□ 0.12
PCDHA1-203ENST00000504120 OR8K3Q8NH51 312 aa15.77■□□□□ 0.12
PCDHA1-203ENST00000504120 ZNF559Q9BR84 538 aa15.77■□□□□ 0.12
PCDHA1-203ENST00000504120 DNAJC25-GNG10A0A024R161 153 aa15.77■□□□□ 0.12
PCDHA1-203ENST00000504120 MEIS3P2A8K0S8 358 aa15.77■□□□□ 0.12
PCDHA1-203ENST00000504120 SLC1A7O00341 560 aa15.77■□□□□ 0.12
PCDHA1-203ENST00000504120 RTCAO00442 366 aaKnown RBP15.77■□□□□ 0.12
PCDHA1-203ENST00000504120 ANXA3P12429 323 aa15.77■□□□□ 0.12
PCDHA1-203ENST00000504120 ETFAP13804 333 aa15.77■□□□□ 0.12
PCDHA1-203ENST00000504120 TIGD4Q8IY51 512 aa15.77■□□□□ 0.12
PCDHA1-203ENST00000504120 CLECL1Q8IZS7 167 aa15.77■□□□□ 0.12
PCDHA1-203ENST00000504120 MR1Q95460 341 aa15.77■□□□□ 0.12
PCDHA1-203ENST00000504120 STUB1Q9UNE7 303 aa15.77■□□□□ 0.12
PCDHA1-203ENST00000504120 NME4O00746 187 aa15.77■□□□□ 0.11
PCDHA1-203ENST00000504120 ADRB3P13945 408 aa15.77■□□□□ 0.11
PCDHA1-203ENST00000504120 MAGEA8P43361 318 aa15.77■□□□□ 0.11
PCDHA1-203ENST00000504120 ZNF84P51523 738 aa15.77■□□□□ 0.11
PCDHA1-203ENST00000504120 KCTD9Q7L273 389 aa15.77■□□□□ 0.11
PCDHA1-203ENST00000504120 SCD5Q86SK9 330 aa15.77■□□□□ 0.11
PCDHA1-203ENST00000504120 ACBD7Q8N6N7 88 aa15.77■□□□□ 0.11
PCDHA1-203ENST00000504120 JPH3Q8WXH2 748 aaPredicted RBP15.77■□□□□ 0.11
PCDHA1-203ENST00000504120 FEVQ99581 238 aa15.77■□□□□ 0.11
PCDHA1-203ENST00000504120 ACSL6Q9UKU0 697 aa15.77■□□□□ 0.11
PCDHA1-203ENST00000504120 DHDHQ9UQ10 334 aa15.77■□□□□ 0.11
PCDHA1-203ENST00000504120 MYOCOSA0A1B0GUC4 107 aa15.77■□□□□ 0.11
PCDHA1-203ENST00000504120 KIAA0513O60268 411 aa15.77■□□□□ 0.11
PCDHA1-203ENST00000504120 AK4P27144 223 aaPredicted RBP15.77■□□□□ 0.11
PCDHA1-203ENST00000504120 NTSR1P30989 418 aa15.77■□□□□ 0.11
PCDHA1-203ENST00000504120 HTR6P50406 440 aa15.77■□□□□ 0.11
PCDHA1-203ENST00000504120 PLP2Q04941 152 aa15.77■□□□□ 0.11
PCDHA1-203ENST00000504120 AAK1Q2M2I8 961 aa15.77■□□□□ 0.11
PCDHA1-203ENST00000504120 COMMD6Q7Z4G1 85 aa15.77■□□□□ 0.11
PCDHA1-203ENST00000504120 OR8K5Q8NH50 307 aa15.77■□□□□ 0.11
PCDHA1-203ENST00000504120 TMEM19Q96HH6 336 aa15.77■□□□□ 0.11
PCDHA1-203ENST00000504120 DEFB126Q9BYW3 111 aa15.77■□□□□ 0.11
PCDHA1-203ENST00000504120 KLHL21Q9UJP4 597 aa15.77■□□□□ 0.11
PCDHA1-203ENST00000504120 ABCG2Q9UNQ0 655 aa15.77■□□□□ 0.11
PCDHA1-203ENST00000504120 TRAV6A0A075B6T7 132 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 HSPA12AO43301 675 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 SCO2O43819 266 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 IL33O95760 270 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 LAMP1P11279 417 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 PYCR1P32322 319 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 MAGEA12P43365 314 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 CRYZQ08257 329 aaKnown RBP15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 C18orf21Q32NC0 220 aaPredicted RBP15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 CMPK2Q5EBM0 449 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 C1orf94Q6P1W5 598 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 KLHDC8AQ8IYD2 350 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 TEX26Q8N6G2 289 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 GAL3ST3Q96A11 431 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 TREM1Q9NP99 234 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 ARMC1Q9NVT9 282 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 PCDHGA7Q9Y5G6 932 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 SPO11Q9Y5K1 396 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 NPIPA2E9PIF3 369 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 NPIPA3F8WFD2 350 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 CTSAP10619 480 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 JUNDP17535 347 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 NAA10P41227 235 aaPredicted RBP15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 MAGEA6P43360 314 aa15.76■□□□□ 0.11
PCDHA1-203ENST00000504120 KDELC1Q6UW63 502 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms