RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 BAIAP2L2Q6UXY1 529 aa5.69□□□□□ -1.5
LINC01340-201ENST00000504012 HIST3H2AQ7L7L0 130 aa5.69□□□□□ -1.5
LINC01340-201ENST00000504012 PID1Q7Z2X4 250 aa5.69□□□□□ -1.5
LINC01340-201ENST00000504012 ISCA2Q86U28 154 aa5.69□□□□□ -1.5
LINC01340-201ENST00000504012 LDLRAD3Q86YD5 345 aa5.69□□□□□ -1.5
LINC01340-201ENST00000504012 FAM217AQ8IXS0 508 aa5.69□□□□□ -1.5
LINC01340-201ENST00000504012 CARFQ8N187 725 aa5.69□□□□□ -1.5
LINC01340-201ENST00000504012 ZNF619Q8N2I2 560 aa5.69□□□□□ -1.5
LINC01340-201ENST00000504012 PGBD5Q8N414 524 aa5.69□□□□□ -1.5
LINC01340-201ENST00000504012 SPATA6LQ8N4H0 392 aa5.69□□□□□ -1.5
LINC01340-201ENST00000504012 DNAJC5GQ8N7S2 189 aa5.69□□□□□ -1.5
LINC01340-201ENST00000504012 C15orf54Q8N8G6 183 aa5.69□□□□□ -1.5
LINC01340-201ENST00000504012 OR2T35Q8NGX2 323 aa5.69□□□□□ -1.5
LINC01340-201ENST00000504012 AKR7LQ8NHP1 331 aa5.69□□□□□ -1.5
LINC01340-201ENST00000504012 PHOSPHO1Q8TCT1 267 aa5.69□□□□□ -1.5
LINC01340-201ENST00000504012 KCTD13Q8WZ19 329 aa5.69□□□□□ -1.5
LINC01340-201ENST00000504012 HIST1H2ACQ93077 130 aa5.69□□□□□ -1.5
LINC01340-201ENST00000504012 UBE2FQ969M7 185 aa5.69□□□□□ -1.5
LINC01340-201ENST00000504012 SLC22A18Q96BI1 424 aa5.69□□□□□ -1.5
LINC01340-201ENST00000504012 PABPC5Q96DU9 382 aaKnown RBP5.69□□□□□ -1.5
LINC01340-201ENST00000504012 FAM120BQ96EK7 910 aaKnown RBP5.69□□□□□ -1.5
LINC01340-201ENST00000504012 ZNF419Q96HQ0 510 aaPredicted RBP5.69□□□□□ -1.5
LINC01340-201ENST00000504012 FUBP3Q96I24 572 aaKnown RBP eCLIP5.69□□□□□ -1.5
LINC01340-201ENST00000504012 ITCHQ96J02 903 aa5.69□□□□□ -1.5
LINC01340-201ENST00000504012 C7orf34Q96L11 122 aa5.69□□□□□ -1.5
LINC01340-201ENST00000504012 TEX37Q96LM6 180 aa5.69□□□□□ -1.5
LINC01340-201ENST00000504012 CMSS1Q9BQ75 279 aaKnown RBP5.69□□□□□ -1.5
LINC01340-201ENST00000504012 TEX101Q9BY14 249 aa5.69□□□□□ -1.5
LINC01340-201ENST00000504012 NLNQ9BYT8 704 aa5.69□□□□□ -1.5
LINC01340-201ENST00000504012 SLC38A1Q9H2H9 487 aa5.69□□□□□ -1.5
LINC01340-201ENST00000504012 OSGEPL1Q9H4B0 414 aa5.69□□□□□ -1.5
LINC01340-201ENST00000504012 KLHL31Q9H511 634 aa5.69□□□□□ -1.5
LINC01340-201ENST00000504012 MID1IP1Q9NPA3 183 aa5.69□□□□□ -1.5
LINC01340-201ENST00000504012 EXOSC4Q9NPD3 245 aaKnown RBP5.69□□□□□ -1.5
LINC01340-201ENST00000504012 TMEM138Q9NPI0 162 aa5.69□□□□□ -1.5
LINC01340-201ENST00000504012 B3GAT2Q9NPZ5 323 aa5.69□□□□□ -1.5
LINC01340-201ENST00000504012 NANSQ9NR45 359 aa5.69□□□□□ -1.5
LINC01340-201ENST00000504012 CYSLTR2Q9NS75 346 aa5.69□□□□□ -1.5
LINC01340-201ENST00000504012 C14orf105Q9NVL8 296 aa5.69□□□□□ -1.5
LINC01340-201ENST00000504012 GPR83Q9NYM4 423 aa5.69□□□□□ -1.5
LINC01340-201ENST00000504012 NDOR1Q9UHB4 597 aa5.69□□□□□ -1.5
LINC01340-201ENST00000504012 PCDHB10Q9UN67 800 aa5.69□□□□□ -1.5
LINC01340-201ENST00000504012 PPIEQ9UNP9 301 aaKnown RBP5.69□□□□□ -1.5
LINC01340-201ENST00000504012 CA5BQ9Y2D0 317 aa5.69□□□□□ -1.5
LINC01340-201ENST00000504012 ZNF451Q9Y4E5 1061 aa5.69□□□□□ -1.5
LINC01340-201ENST00000504012 PCDHB9Q9Y5E1 797 aa5.69□□□□□ -1.5
LINC01340-201ENST00000504012 CFAP20Q9Y6A4 193 aaKnown RBP5.69□□□□□ -1.5
LINC01340-201ENST00000504012 A0A1B0GUH1 482 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 A0A1B0GV90 55 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 TRDV1A0A1B0GX56 115 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 TCRBV16S1A1N1A0A5B0 115 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 OR2M5A3KFT3 312 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 NAP1L6A6NFF2 107 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 ACOD1A6NK06 481 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 OR6C75A6NL08 312 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 RFPL4AA6NLU0 287 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 AGAP14A8MT82 685 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 SNRPGP15A8MWD9 76 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 ZNF879B4DU55 563 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 DISC1C4P0D8 188 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 C5orf58C9J3I9 102 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 RFPL4AL1F8VTS6 287 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 NPIPB9F8W1W9 429 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 STMND1H3BQB6 276 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 H7C0S8 307 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 GTPBP1O00178 669 aaKnown RBP5.68□□□□□ -1.5
LINC01340-201ENST00000504012 CACNB4O00305 520 aaPredicted RBP5.68□□□□□ -1.5
LINC01340-201ENST00000504012 CASKO14936 926 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 TCAPO15273 167 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 SMAD6O43541 496 aaKnown RBP5.68□□□□□ -1.5
LINC01340-201ENST00000504012 PRAMEF2O60811 474 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 AP2A2O94973 939 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 OAZ2O95190 189 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 IGHV2-5P01817 119 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 THP07101 528 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 KLK3P07288 261 aaPredicted RBP5.68□□□□□ -1.5
LINC01340-201ENST00000504012 CHRM5P08912 532 aaPredicted RBP5.68□□□□□ -1.5
LINC01340-201ENST00000504012 LINC00032P0C843 101 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 UBBP0CG47 229 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 UBCP0CG48 685 aaKnown RBP5.68□□□□□ -1.5
LINC01340-201ENST00000504012 ARP10275 920 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 HAPLN1P10915 354 aaPredicted RBP5.68□□□□□ -1.5
LINC01340-201ENST00000504012 CKBP12277 381 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 ARSAP15289 507 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 BPIP17213 487 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 GJA1P17302 382 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 ARF4P18085 180 aaPredicted RBP5.68□□□□□ -1.5
LINC01340-201ENST00000504012 CXCL2P19875 107 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 NMBRP28336 390 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 CRABP1P29762 137 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 BTCP35070 178 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 IRS1P35568 1242 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 AVPR1AP37288 418 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 NNMTP40261 264 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 RGS4P49798 205 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 RAB5CP51148 216 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 SUOXP51687 545 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 CLCN7P51798 805 aa5.68□□□□□ -1.5
LINC01340-201ENST00000504012 SUCLG1P53597 346 aaKnown RBP5.68□□□□□ -1.5
LINC01340-201ENST00000504012 CRISP3P54108 245 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms