RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 NR4A3Q92570 626 aa14.18□□□□□ -0.14
SNF8-203ENST00000504000 RNF170Q96K19 258 aa14.18□□□□□ -0.14
SNF8-203ENST00000504000 ZNF582Q96NG8 517 aaPredicted RBP14.18□□□□□ -0.14
SNF8-203ENST00000504000 TREX2Q9BQ50 279 aaPredicted RBP14.18□□□□□ -0.14
SNF8-203ENST00000504000 MS4A8Q9BY19 250 aa14.18□□□□□ -0.14
SNF8-203ENST00000504000 ZDHHC5Q9C0B5 715 aa14.18□□□□□ -0.14
SNF8-203ENST00000504000 BCL2L10Q9HD36 194 aa14.18□□□□□ -0.14
SNF8-203ENST00000504000 P2RX2Q9UBL9 471 aa14.18□□□□□ -0.14
SNF8-203ENST00000504000 CCL26Q9Y258 94 aa14.18□□□□□ -0.14
SNF8-203ENST00000504000 HTTP42858 3142 aa14.18□□□□□ -0.14
SNF8-203ENST00000504000 A0A1W2PQL4 384 aaPredicted RBP14.18□□□□□ -0.14
SNF8-203ENST00000504000 FAM25AB3EWG3 89 aa14.18□□□□□ -0.14
SNF8-203ENST00000504000 FAM25CB3EWG5 89 aa14.18□□□□□ -0.14
SNF8-203ENST00000504000 FAM25GB3EWG6 89 aa14.18□□□□□ -0.14
SNF8-203ENST00000504000 B4DXG7 233 aa14.18□□□□□ -0.14
SNF8-203ENST00000504000 ANHXE9PGG2 379 aa14.18□□□□□ -0.14
SNF8-203ENST00000504000 NRG2O14511 850 aaPredicted RBP14.18□□□□□ -0.14
SNF8-203ENST00000504000 PLD2O14939 933 aa14.18□□□□□ -0.14
SNF8-203ENST00000504000 TLX2O43763 284 aaPredicted RBP14.18□□□□□ -0.14
SNF8-203ENST00000504000 CYP7B1O75881 506 aa14.18□□□□□ -0.14
SNF8-203ENST00000504000 IGFBP1P08833 259 aaPredicted RBP14.18□□□□□ -0.14
SNF8-203ENST00000504000 ACP2P11117 423 aa14.18□□□□□ -0.14
SNF8-203ENST00000504000 MYL12AP19105 171 aa14.18□□□□□ -0.14
SNF8-203ENST00000504000 HSD17B2P37059 387 aa14.18□□□□□ -0.14
SNF8-203ENST00000504000 SMSP52788 366 aa14.18□□□□□ -0.14
SNF8-203ENST00000504000 CCL23P55773 120 aa14.18□□□□□ -0.14
SNF8-203ENST00000504000 TRA2BP62995 288 aaKnown RBP14.18□□□□□ -0.14
SNF8-203ENST00000504000 MEF2AQ02078 507 aaPredicted RBP14.18□□□□□ -0.14
SNF8-203ENST00000504000 DPTQ07507 201 aa14.18□□□□□ -0.14
SNF8-203ENST00000504000 RPA4Q13156 261 aa14.18□□□□□ -0.14
SNF8-203ENST00000504000 GPAT3Q53EU6 434 aa14.18□□□□□ -0.14
SNF8-203ENST00000504000 ZNF628Q5EBL2 1059 aa14.18□□□□□ -0.14
SNF8-203ENST00000504000 TIGD3Q6B0B8 471 aa14.18□□□□□ -0.14
SNF8-203ENST00000504000 ZNF730Q6ZMV8 503 aa14.18□□□□□ -0.14
SNF8-203ENST00000504000 DEF8Q6ZN54 512 aa14.18□□□□□ -0.14
SNF8-203ENST00000504000 ZER1Q7Z7L7 766 aa14.18□□□□□ -0.14
SNF8-203ENST00000504000 GATAD2AQ86YP4 633 aa14.18□□□□□ -0.14
SNF8-203ENST00000504000 OR4D11Q8NGI4 311 aa14.18□□□□□ -0.14
SNF8-203ENST00000504000 GRPEL2Q8TAA5 225 aa14.18□□□□□ -0.14
SNF8-203ENST00000504000 FRMD6Q96NE9 622 aa14.18□□□□□ -0.14
SNF8-203ENST00000504000 SOSTQ9BQB4 213 aa14.18□□□□□ -0.14
SNF8-203ENST00000504000 SMG9Q9H0W8 520 aaKnown RBP14.18□□□□□ -0.14
SNF8-203ENST00000504000 ANKRA2Q9H9E1 313 aa14.18□□□□□ -0.14
SNF8-203ENST00000504000 TIGARQ9NQ88 270 aa14.18□□□□□ -0.14
SNF8-203ENST00000504000 WASH6PQ9NQA3 447 aa14.18□□□□□ -0.14
SNF8-203ENST00000504000 TVP23BQ9NYZ1 205 aa14.18□□□□□ -0.14
SNF8-203ENST00000504000 GSTK1Q9Y2Q3 226 aa14.18□□□□□ -0.14
SNF8-203ENST00000504000 SF3B6Q9Y3B4 125 aaKnown RBP14.18□□□□□ -0.14
SNF8-203ENST00000504000 MTCL1Q9Y4B5 1905 aaKnown RBP14.17□□□□□ -0.14
SNF8-203ENST00000504000 WWP2O00308 870 aa14.17□□□□□ -0.14
SNF8-203ENST00000504000 SLC30A4O14863 429 aa14.17□□□□□ -0.14
SNF8-203ENST00000504000 PRODHO43272 600 aa14.17□□□□□ -0.14
SNF8-203ENST00000504000 PROM1O43490 865 aa14.17□□□□□ -0.14
SNF8-203ENST00000504000 VEGFDO43915 354 aa14.17□□□□□ -0.14
SNF8-203ENST00000504000 B4GALT2O60909 372 aa14.17□□□□□ -0.14
SNF8-203ENST00000504000 PAPLNO95428 1278 aa14.17□□□□□ -0.14
SNF8-203ENST00000504000 FGF19O95750 216 aa14.17□□□□□ -0.14
SNF8-203ENST00000504000 C8AP07357 584 aa14.17□□□□□ -0.14
SNF8-203ENST00000504000 GJA1P17302 382 aa14.17□□□□□ -0.14
SNF8-203ENST00000504000 CPN2P22792 545 aa14.17□□□□□ -0.14
SNF8-203ENST00000504000 GABRA5P31644 462 aa14.17□□□□□ -0.14
SNF8-203ENST00000504000 PPM1AP35813 382 aa14.17□□□□□ -0.14
SNF8-203ENST00000504000 PPP3R1P63098 170 aa14.17□□□□□ -0.14
SNF8-203ENST00000504000 TSTA3Q13630 321 aaPredicted RBP14.17□□□□□ -0.14
SNF8-203ENST00000504000 RIN1Q13671 783 aa14.17□□□□□ -0.14
SNF8-203ENST00000504000 GINS1Q14691 196 aa14.17□□□□□ -0.14
SNF8-203ENST00000504000 PODNL1Q6PEZ8 512 aa14.17□□□□□ -0.14
SNF8-203ENST00000504000 QSOX2Q6ZRP7 698 aa14.17□□□□□ -0.14
SNF8-203ENST00000504000 WDR53Q7Z5U6 358 aaPredicted RBP14.17□□□□□ -0.14
SNF8-203ENST00000504000 NOXA1Q86UR1 476 aa14.17□□□□□ -0.14
SNF8-203ENST00000504000 TRAPPC5Q8IUR0 188 aa14.17□□□□□ -0.14
SNF8-203ENST00000504000 MMP21Q8N119 569 aa14.17□□□□□ -0.14
SNF8-203ENST00000504000 SLAIN1Q8ND83 568 aa14.17□□□□□ -0.14
SNF8-203ENST00000504000 OTUB2Q96DC9 234 aa14.17□□□□□ -0.14
SNF8-203ENST00000504000 DIRAS2Q96HU8 199 aa14.17□□□□□ -0.14
SNF8-203ENST00000504000 LRR1Q96L50 414 aa14.17□□□□□ -0.14
SNF8-203ENST00000504000 RIPOR3Q96MK2 946 aa14.17□□□□□ -0.14
SNF8-203ENST00000504000 AIF1LQ9BQI0 150 aa14.17□□□□□ -0.14
SNF8-203ENST00000504000 PCBD2Q9H0N5 130 aa14.17□□□□□ -0.14
SNF8-203ENST00000504000 RNF121Q9H920 327 aa14.17□□□□□ -0.14
SNF8-203ENST00000504000 KLHL21Q9UJP4 597 aa14.17□□□□□ -0.14
SNF8-203ENST00000504000 SLC9A8Q9Y2E8 581 aa14.17□□□□□ -0.14
SNF8-203ENST00000504000 EXOSC1Q9Y3B2 195 aaKnown RBP14.17□□□□□ -0.14
SNF8-203ENST00000504000 TMCC2O75069 709 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 TSPAN19P0C672 248 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 TNNI3P19429 210 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 CFL1P23528 166 aaKnown RBP14.16□□□□□ -0.14
SNF8-203ENST00000504000 MMP11P24347 488 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 MYL9P24844 172 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 PPP2R1BP30154 601 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 ETV5P41161 510 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 CCT3P49368 545 aaKnown RBP14.16□□□□□ -0.14
SNF8-203ENST00000504000 ETV1P50549 477 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 EPHA5P54756 1037 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 RPS26P62854 115 aaKnown RBP14.16□□□□□ -0.14
SNF8-203ENST00000504000 HNRNPA0Q13151 305 aaKnown RBP14.16□□□□□ -0.14
SNF8-203ENST00000504000 SLAMF1Q13291 335 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 GNA13Q14344 377 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 GRIN2CQ14957 1233 aa14.16□□□□□ -0.14
SNF8-203ENST00000504000 TRIM60Q495X7 471 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms