RNA–Protein interactions for RNA: ENST00000503628.5

DDR1-250, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-250ENST00000503628 CROCCP2Q86T23 111 aa14.57□□□□□ -0.08
DDR1-250ENST00000503628 KRT78Q8N1N4 520 aa14.57□□□□□ -0.08
DDR1-250ENST00000503628 ANKRD53Q8N9V6 530 aa14.57□□□□□ -0.08
DDR1-250ENST00000503628 NANOS1Q8WY41 292 aaKnown RBP14.57□□□□□ -0.08
DDR1-250ENST00000503628 SMIM10Q96HG1 83 aa14.57□□□□□ -0.08
DDR1-250ENST00000503628 EFCAB11Q9BUY7 163 aa14.57□□□□□ -0.08
DDR1-250ENST00000503628 NT5DC2Q9H857 520 aa14.57□□□□□ -0.08
DDR1-250ENST00000503628 SPRR3Q9UBC9 169 aa14.57□□□□□ -0.08
DDR1-250ENST00000503628 MMACHCQ9Y4U1 282 aa14.57□□□□□ -0.08
DDR1-250ENST00000503628 NCKAP5O14513 1909 aa14.56□□□□□ -0.08
DDR1-250ENST00000503628 TRGV5A0A0B4J1U4 118 aa14.56□□□□□ -0.08
DDR1-250ENST00000503628 FAM171A2A8MVW0 826 aa14.56□□□□□ -0.08
DDR1-250ENST00000503628 C4orf51C9J302 202 aa14.56□□□□□ -0.08
DDR1-250ENST00000503628 DLX3O60479 287 aa14.56□□□□□ -0.08
DDR1-250ENST00000503628 PLIN3O60664 434 aa14.56□□□□□ -0.08
DDR1-250ENST00000503628 PROCP04070 461 aa14.56□□□□□ -0.08
DDR1-250ENST00000503628 RPS17P08708 135 aaKnown RBP14.56□□□□□ -0.08
DDR1-250ENST00000503628 EPXP11678 715 aa14.56□□□□□ -0.08
DDR1-250ENST00000503628 CD22P20273 847 aa14.56□□□□□ -0.08
DDR1-250ENST00000503628 ENDOUP21128 410 aaKnown RBP14.56□□□□□ -0.08
DDR1-250ENST00000503628 BMP5P22003 454 aa14.56□□□□□ -0.08
DDR1-250ENST00000503628 PCSK6P29122 969 aa14.56□□□□□ -0.08
DDR1-250ENST00000503628 ASCL1P50553 236 aa14.56□□□□□ -0.08
DDR1-250ENST00000503628 LAPTM5Q13571 262 aa14.56□□□□□ -0.08
DDR1-250ENST00000503628 HYAL4Q2M3T9 481 aa14.56□□□□□ -0.08
DDR1-250ENST00000503628 PAGE2BQ5JRK9 111 aa14.56□□□□□ -0.08
DDR1-250ENST00000503628 TMIGD1Q6UXZ0 262 aa14.56□□□□□ -0.08
DDR1-250ENST00000503628 RTL4Q6ZR62 310 aa14.56□□□□□ -0.08
DDR1-250ENST00000503628 SLC22A9Q8IVM8 553 aa14.56□□□□□ -0.08
DDR1-250ENST00000503628 SCUBE1Q8IWY4 988 aa14.56□□□□□ -0.08
DDR1-250ENST00000503628 BANPQ8N9N5 519 aa14.56□□□□□ -0.08
DDR1-250ENST00000503628 TRPV3Q8NET8 790 aa14.56□□□□□ -0.08
DDR1-250ENST00000503628 TTLQ8NG68 377 aa14.56□□□□□ -0.08
DDR1-250ENST00000503628 SPATA3Q8NHX4 192 aa14.56□□□□□ -0.08
DDR1-250ENST00000503628 LRRC46Q96FV0 321 aa14.56□□□□□ -0.08
DDR1-250ENST00000503628 APOPT1Q96IL0 206 aa14.56□□□□□ -0.08
DDR1-250ENST00000503628 IPPKQ9H8X2 491 aa14.56□□□□□ -0.08
DDR1-250ENST00000503628 SEMA4BQ9NPR2 832 aaPredicted RBP14.56□□□□□ -0.08
DDR1-250ENST00000503628 TUBA8Q9NY65 449 aaPredicted RBP14.56□□□□□ -0.08
DDR1-250ENST00000503628 SENP1Q9P0U3 644 aa14.56□□□□□ -0.08
DDR1-250ENST00000503628 PCTPQ9UKL6 214 aa14.56□□□□□ -0.08
DDR1-250ENST00000503628 CLDN16Q9Y5I7 305 aa14.56□□□□□ -0.08
DDR1-250ENST00000503628 URADA6NGE7 173 aa14.55□□□□□ -0.08
DDR1-250ENST00000503628 HCN1O60741 890 aa14.55□□□□□ -0.08
DDR1-250ENST00000503628 FREM3P0C091 2139 aa14.55□□□□□ -0.08
DDR1-250ENST00000503628 MYL2P10916 166 aa14.55□□□□□ -0.08
DDR1-250ENST00000503628 CD53P19397 219 aa14.55□□□□□ -0.08
DDR1-250ENST00000503628 GSTM2P28161 218 aa14.55□□□□□ -0.08
DDR1-250ENST00000503628 HK2P52789 917 aa14.55□□□□□ -0.08
DDR1-250ENST00000503628 DCAF7P61962 342 aa14.55□□□□□ -0.08
DDR1-250ENST00000503628 HERVK_113P63132 956 aa14.55□□□□□ -0.08
DDR1-250ENST00000503628 HIST2H2ACQ16777 129 aaPredicted RBP14.55□□□□□ -0.08
DDR1-250ENST00000503628 FBXL19-AS1Q494R0 122 aa14.55□□□□□ -0.08
DDR1-250ENST00000503628 SHEQ5VZ18 495 aa14.55□□□□□ -0.08
DDR1-250ENST00000503628 HIST2H2AA3Q6FI13 130 aa14.55□□□□□ -0.08
DDR1-250ENST00000503628 ZYG11AQ6WRX3 759 aa14.55□□□□□ -0.08
DDR1-250ENST00000503628 CXXC5Q7LFL8 322 aaKnown RBP14.55□□□□□ -0.08
DDR1-250ENST00000503628 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.55□□□□□ -0.08
DDR1-250ENST00000503628 ULK2Q8IYT8 1036 aa14.55□□□□□ -0.08
DDR1-250ENST00000503628 NAXEQ8NCW5 288 aa14.55□□□□□ -0.08
DDR1-250ENST00000503628 NSUN5Q96P11 429 aaKnown RBP14.55□□□□□ -0.08
DDR1-250ENST00000503628 C1QTNF3Q9BXJ4 246 aa14.55□□□□□ -0.08
DDR1-250ENST00000503628 ERVK-6Q9BXR3 956 aa14.55□□□□□ -0.08
DDR1-250ENST00000503628 AICDAQ9GZX7 198 aa14.55□□□□□ -0.08
DDR1-250ENST00000503628 IQCGQ9H095 443 aaKnown RBP14.55□□□□□ -0.08
DDR1-250ENST00000503628 PRTFDC1Q9NRG1 225 aa14.55□□□□□ -0.08
DDR1-250ENST00000503628 SACM1LQ9NTJ5 587 aa14.55□□□□□ -0.08
DDR1-250ENST00000503628 ZANQ9Y493 2812 aa14.54□□□□□ -0.08
DDR1-250ENST00000503628 TUBAL3A6NHL2 446 aa14.54□□□□□ -0.08
DDR1-250ENST00000503628 G3V2L1 256 aa14.54□□□□□ -0.08
DDR1-250ENST00000503628 DVL2O14641 736 aa14.54□□□□□ -0.08
DDR1-250ENST00000503628 UGDHO60701 494 aa14.54□□□□□ -0.08
DDR1-250ENST00000503628 ZNF354AO60765 605 aaPredicted RBP14.54□□□□□ -0.08
DDR1-250ENST00000503628 CCL3P10147 92 aa14.54□□□□□ -0.08
DDR1-250ENST00000503628 HNRNPFP52597 415 aaKnown RBP14.54□□□□□ -0.08
DDR1-250ENST00000503628 PRKAA2P54646 552 aa14.54□□□□□ -0.08
DDR1-250ENST00000503628 BTN3A2P78410 334 aa14.54□□□□□ -0.08
DDR1-250ENST00000503628 RUNX2Q13950 521 aa14.54□□□□□ -0.08
DDR1-250ENST00000503628 CASP8Q14790 479 aa14.54□□□□□ -0.08
DDR1-250ENST00000503628 TOR1AIP1Q5JTV8 583 aa14.54□□□□□ -0.08
DDR1-250ENST00000503628 ZNF678Q5SXM1 525 aa14.54□□□□□ -0.08
DDR1-250ENST00000503628 LIPJQ5W064 366 aa14.54□□□□□ -0.08
DDR1-250ENST00000503628 GRHL2Q6ISB3 625 aa14.54□□□□□ -0.08
DDR1-250ENST00000503628 HSDL2Q6YN16 418 aa14.54□□□□□ -0.08
DDR1-250ENST00000503628 CCDC63Q8NA47 563 aa14.54□□□□□ -0.08
DDR1-250ENST00000503628 GOLM1Q8NBJ4 401 aa14.54□□□□□ -0.08
DDR1-250ENST00000503628 TMEM52Q8NDY8 209 aa14.54□□□□□ -0.08
DDR1-250ENST00000503628 TNIP2Q8NFZ5 429 aa14.54□□□□□ -0.08
DDR1-250ENST00000503628 LINC01560Q8TB33 94 aa14.54□□□□□ -0.08
DDR1-250ENST00000503628 RDH11Q8TC12 318 aa14.54□□□□□ -0.08
DDR1-250ENST00000503628 ZNF483Q8TF39 744 aaPredicted RBP14.54□□□□□ -0.08
DDR1-250ENST00000503628 UBE2E3Q969T4 207 aa14.54□□□□□ -0.08
DDR1-250ENST00000503628 CCDC126Q96EE4 140 aa14.54□□□□□ -0.08
DDR1-250ENST00000503628 TMEM237Q96Q45 408 aa14.54□□□□□ -0.08
DDR1-250ENST00000503628 C12orf65Q9H3J6 166 aaKnown RBP14.54□□□□□ -0.08
DDR1-250ENST00000503628 CENPHQ9H3R5 247 aa14.54□□□□□ -0.08
DDR1-250ENST00000503628 NOL11Q9H8H0 719 aaKnown RBP14.54□□□□□ -0.08
DDR1-250ENST00000503628 ACTR8Q9H981 624 aa14.54□□□□□ -0.08
DDR1-250ENST00000503628 ADAP2Q9NPF8 381 aa14.54□□□□□ -0.08
DDR1-250ENST00000503628 ARGLU1Q9NWB6 273 aaPredicted RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms