RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 SMNDC1O75940 238 aaKnown RBP eCLIP20.69■□□□□ 0.9
PTPN13-205ENST00000502971 CNR2P34972 360 aa20.69■□□□□ 0.9
PTPN13-205ENST00000502971 MC3RP41968 323 aa20.69■□□□□ 0.9
PTPN13-205ENST00000502971 ARRB1P49407 418 aaPredicted RBP20.69■□□□□ 0.9
PTPN13-205ENST00000502971 RAB38P57729 211 aa20.69■□□□□ 0.9
PTPN13-205ENST00000502971 SKP1P63208 163 aa20.69■□□□□ 0.9
PTPN13-205ENST00000502971 BNIP3Q12983 259 aa20.69■□□□□ 0.9
PTPN13-205ENST00000502971 RFX4Q33E94 735 aa20.69■□□□□ 0.9
PTPN13-205ENST00000502971 PMS2CLQ68D20 193 aa20.69■□□□□ 0.9
PTPN13-205ENST00000502971 SLC44A2Q8IWA5 706 aaPredicted RBP20.69■□□□□ 0.9
PTPN13-205ENST00000502971 HS3ST5Q8IZT8 346 aa20.69■□□□□ 0.9
PTPN13-205ENST00000502971 CARFQ8N187 725 aa20.69■□□□□ 0.9
PTPN13-205ENST00000502971 SLC25A45Q8N413 288 aa20.69■□□□□ 0.9
PTPN13-205ENST00000502971 XAGE5Q8WWM1 108 aa20.69■□□□□ 0.9
PTPN13-205ENST00000502971 RASSF5Q8WWW0 418 aa20.69■□□□□ 0.9
PTPN13-205ENST00000502971 GAB3Q8WWW8 586 aa20.69■□□□□ 0.9
PTPN13-205ENST00000502971 TANKQ92844 425 aa20.69■□□□□ 0.9
PTPN13-205ENST00000502971 ZNF285Q96NJ3 590 aa20.69■□□□□ 0.9
PTPN13-205ENST00000502971 TGM7Q96PF1 710 aa20.69■□□□□ 0.9
PTPN13-205ENST00000502971 COL25A1Q9BXS0 654 aaPredicted RBP20.69■□□□□ 0.9
PTPN13-205ENST00000502971 RUBCNLQ9H714 662 aa20.69■□□□□ 0.9
PTPN13-205ENST00000502971 TMEM74BQ9NUR3 256 aa20.69■□□□□ 0.9
PTPN13-205ENST00000502971 NDUFAF4Q9P032 175 aa20.69■□□□□ 0.9
PTPN13-205ENST00000502971 PLCL2Q9UPR0 1127 aa20.69■□□□□ 0.9
PTPN13-205ENST00000502971 SAMHD1Q9Y3Z3 626 aaKnown RBP20.69■□□□□ 0.9
PTPN13-205ENST00000502971 SCN3AQ9NY46 2000 aa20.69■□□□□ 0.9
PTPN13-205ENST00000502971 ASNA1O43681 348 aa20.68■□□□□ 0.9
PTPN13-205ENST00000502971 DIRAS1O95057 198 aa20.68■□□□□ 0.9
PTPN13-205ENST00000502971 CPMP14384 443 aa20.68■□□□□ 0.9
PTPN13-205ENST00000502971 PORP16435 677 aaPredicted RBP20.68■□□□□ 0.9
PTPN13-205ENST00000502971 MLLT3P42568 568 aaPredicted RBP20.68■□□□□ 0.9
PTPN13-205ENST00000502971 GABRA4P48169 554 aa20.68■□□□□ 0.9
PTPN13-205ENST00000502971 PPP1R8Q12972 351 aaKnown RBP20.68■□□□□ 0.9
PTPN13-205ENST00000502971 LASP1Q14847 261 aaKnown RBP20.68■□□□□ 0.9
PTPN13-205ENST00000502971 RPS26P11Q5JNZ5 115 aaPredicted RBP20.68■□□□□ 0.9
PTPN13-205ENST00000502971 USP51Q70EK9 711 aa20.68■□□□□ 0.9
PTPN13-205ENST00000502971 LGI4Q8N135 537 aa20.68■□□□□ 0.9
PTPN13-205ENST00000502971 OR5D16Q8NGK9 328 aa20.68■□□□□ 0.9
PTPN13-205ENST00000502971 NCSTNQ92542 709 aa20.68■□□□□ 0.9
PTPN13-205ENST00000502971 SUSD2Q9UGT4 822 aa20.68■□□□□ 0.9
PTPN13-205ENST00000502971 PCDHGB3Q9Y5G1 929 aa20.68■□□□□ 0.9
PTPN13-205ENST00000502971 KNL1Q8NG31 2342 aa20.68■□□□□ 0.9
PTPN13-205ENST00000502971 SGK494L7N484 410 aa20.67■□□□□ 0.9
PTPN13-205ENST00000502971 ADAMDEC1O15204 470 aa20.67■□□□□ 0.9
PTPN13-205ENST00000502971 KIF1CO43896 1103 aaKnown RBP20.67■□□□□ 0.9
PTPN13-205ENST00000502971 SERPINB7O75635 380 aa20.67■□□□□ 0.9
PTPN13-205ENST00000502971 MFN2O95140 757 aa20.67■□□□□ 0.9
PTPN13-205ENST00000502971 NR2F1P10589 423 aa20.67■□□□□ 0.9
PTPN13-205ENST00000502971 GLB1P16278 677 aa20.67■□□□□ 0.9
PTPN13-205ENST00000502971 ALDH4A1P30038 563 aa20.67■□□□□ 0.9
PTPN13-205ENST00000502971 PTGER1P34995 402 aa20.67■□□□□ 0.9
PTPN13-205ENST00000502971 GPR3P46089 330 aa20.67■□□□□ 0.9
PTPN13-205ENST00000502971 GFERP55789 205 aa20.67■□□□□ 0.9
PTPN13-205ENST00000502971 LTB4RQ15722 352 aa20.67■□□□□ 0.9
PTPN13-205ENST00000502971 PRAMEF8Q5VWM4 474 aa20.67■□□□□ 0.9
PTPN13-205ENST00000502971 PRAMEF7Q5VXH5 474 aa20.67■□□□□ 0.9
PTPN13-205ENST00000502971 TSEN54Q7Z6J9 526 aaKnown RBP20.67■□□□□ 0.9
PTPN13-205ENST00000502971 APLFQ8IW19 511 aaPredicted RBP20.67■□□□□ 0.9
PTPN13-205ENST00000502971 SMYD1Q8NB12 490 aa20.67■□□□□ 0.9
PTPN13-205ENST00000502971 OR5T3Q8NGG3 340 aa20.67■□□□□ 0.9
PTPN13-205ENST00000502971 BBS10Q8TAM1 723 aa20.67■□□□□ 0.9
PTPN13-205ENST00000502971 AHCYL2Q96HN2 611 aaKnown RBP20.67■□□□□ 0.9
PTPN13-205ENST00000502971 ZNF300Q96RE9 604 aaPredicted RBP20.67■□□□□ 0.9
PTPN13-205ENST00000502971 BCL2L10Q9HD36 194 aa20.67■□□□□ 0.9
PTPN13-205ENST00000502971 PDE7BQ9NP56 450 aa20.67■□□□□ 0.9
PTPN13-205ENST00000502971 C3orf18Q9UK00 162 aa20.67■□□□□ 0.9
PTPN13-205ENST00000502971 ORC6Q9Y5N6 252 aa20.67■□□□□ 0.9
PTPN13-205ENST00000502971 PRAMEF27A3QJZ7 478 aa20.67■□□□□ 0.9
PTPN13-205ENST00000502971 TNFRSF10AO00220 468 aa20.67■□□□□ 0.9
PTPN13-205ENST00000502971 HS6ST1O60243 411 aa20.67■□□□□ 0.9
PTPN13-205ENST00000502971 SLITRK5O94991 958 aa20.67■□□□□ 0.9
PTPN13-205ENST00000502971 GPR75O95800 540 aa20.67■□□□□ 0.9
PTPN13-205ENST00000502971 PRKACGP22612 351 aa20.67■□□□□ 0.9
PTPN13-205ENST00000502971 CRISP3P54108 245 aa20.67■□□□□ 0.9
PTPN13-205ENST00000502971 RAD23AP54725 363 aa20.67■□□□□ 0.9
PTPN13-205ENST00000502971 SHC2P98077 582 aa20.67■□□□□ 0.9
PTPN13-205ENST00000502971 KCNC4Q03721 635 aa20.67■□□□□ 0.9
PTPN13-205ENST00000502971 SHBQ15464 509 aa20.67■□□□□ 0.9
PTPN13-205ENST00000502971 SYPL1Q16563 259 aa20.67■□□□□ 0.9
PTPN13-205ENST00000502971 GARNL3Q5VVW2 1013 aa20.67■□□□□ 0.9
PTPN13-205ENST00000502971 TTC23Q5W5X9 447 aa20.67■□□□□ 0.9
PTPN13-205ENST00000502971 CEP68Q76N32 757 aa20.67■□□□□ 0.9
PTPN13-205ENST00000502971 OR4N5Q8IXE1 308 aa20.67■□□□□ 0.9
PTPN13-205ENST00000502971 KAT2AQ92830 837 aa20.67■□□□□ 0.9
PTPN13-205ENST00000502971 TREX2Q9BQ50 279 aaPredicted RBP20.67■□□□□ 0.9
PTPN13-205ENST00000502971 SOHLH2Q9NX45 425 aa20.67■□□□□ 0.9
PTPN13-205ENST00000502971 PTGFRNQ9P2B2 879 aa20.67■□□□□ 0.9
PTPN13-205ENST00000502971 CLCA2Q9UQC9 943 aa20.67■□□□□ 0.9
PTPN13-205ENST00000502971 TNRC6BQ9UPQ9 1833 aaKnown RBP20.67■□□□□ 0.9
PTPN13-205ENST00000502971 DPPA5A6NC42 116 aa20.66■□□□□ 0.9
PTPN13-205ENST00000502971 ZBTB11O95625 1053 aaPredicted RBP20.66■□□□□ 0.9
PTPN13-205ENST00000502971 CTSBP07858 339 aa20.66■□□□□ 0.9
PTPN13-205ENST00000502971 GNAO1P09471 354 aa20.66■□□□□ 0.9
PTPN13-205ENST00000502971 IFI6P09912 130 aa20.66■□□□□ 0.9
PTPN13-205ENST00000502971 GIMD1P0DJR0 217 aa20.66■□□□□ 0.9
PTPN13-205ENST00000502971 CD247P20963 164 aa20.66■□□□□ 0.9
PTPN13-205ENST00000502971 NUBP1P53384 320 aa20.66■□□□□ 0.9
PTPN13-205ENST00000502971 BNC1Q01954 994 aa20.66■□□□□ 0.9
PTPN13-205ENST00000502971 FAM53BQ14153 422 aa20.66■□□□□ 0.9
PTPN13-205ENST00000502971 NR1D2Q14995 579 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms