RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 MARF1Q9Y4F3 1742 aaKnown RBP16.43■□□□□ 0.22
HMGXB3-201ENST00000502717 DNAJC25-GNG10A0A024R161 153 aa16.43■□□□□ 0.22
HMGXB3-201ENST00000502717 PTHP01270 115 aa16.43■□□□□ 0.22
HMGXB3-201ENST00000502717 ALAS2P22557 587 aa16.43■□□□□ 0.22
HMGXB3-201ENST00000502717 STX12Q86Y82 276 aa16.43■□□□□ 0.22
HMGXB3-201ENST00000502717 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.43■□□□□ 0.22
HMGXB3-201ENST00000502717 ENTHD1Q8IYW4 607 aa16.43■□□□□ 0.22
HMGXB3-201ENST00000502717 OR4K5Q8NGD3 323 aa16.43■□□□□ 0.22
HMGXB3-201ENST00000502717 SGCDQ92629 289 aa16.43■□□□□ 0.22
HMGXB3-201ENST00000502717 ZNF471Q9BX82 626 aaPredicted RBP16.43■□□□□ 0.22
HMGXB3-201ENST00000502717 ACPTQ9BZG2 426 aa16.43■□□□□ 0.22
HMGXB3-201ENST00000502717 RDH14Q9HBH5 336 aa16.43■□□□□ 0.22
HMGXB3-201ENST00000502717 MKKSQ9NPJ1 570 aaPredicted RBP16.43■□□□□ 0.22
HMGXB3-201ENST00000502717 FKBP14Q9NWM8 211 aa16.43■□□□□ 0.22
HMGXB3-201ENST00000502717 EMC3Q9P0I2 261 aa16.43■□□□□ 0.22
HMGXB3-201ENST00000502717 TMEM5Q9Y2B1 443 aa16.43■□□□□ 0.22
HMGXB3-201ENST00000502717 A0A0G2JN53 185 aa16.43■□□□□ 0.22
HMGXB3-201ENST00000502717 M0R129 80 aa16.43■□□□□ 0.22
HMGXB3-201ENST00000502717 RAB2AP61019 212 aa16.43■□□□□ 0.22
HMGXB3-201ENST00000502717 ZNF155Q12901 538 aaPredicted RBP16.43■□□□□ 0.22
HMGXB3-201ENST00000502717 SELENBP1Q13228 472 aa16.43■□□□□ 0.22
HMGXB3-201ENST00000502717 MS4A15Q8N5U1 240 aa16.43■□□□□ 0.22
HMGXB3-201ENST00000502717 NT5C3BQ969T7 300 aa16.43■□□□□ 0.22
HMGXB3-201ENST00000502717 MBOAT4Q96T53 435 aa16.43■□□□□ 0.22
HMGXB3-201ENST00000502717 IFT46Q9NQC8 304 aa16.43■□□□□ 0.22
HMGXB3-201ENST00000502717 TAF1P21675 1872 aa16.43■□□□□ 0.22
HMGXB3-201ENST00000502717 MYO9BQ13459 2157 aa16.43■□□□□ 0.22
HMGXB3-201ENST00000502717 LOC102723532A0A0G2JNH3 316 aa16.43■□□□□ 0.22
HMGXB3-201ENST00000502717 MUSKO15146 869 aa16.43■□□□□ 0.22
HMGXB3-201ENST00000502717 C1GALT1C1LP0DN25 315 aa16.43■□□□□ 0.22
HMGXB3-201ENST00000502717 HNF1BP35680 557 aa16.43■□□□□ 0.22
HMGXB3-201ENST00000502717 GRK6P43250 576 aa16.43■□□□□ 0.22
HMGXB3-201ENST00000502717 ZNF140P52738 457 aaPredicted RBP16.43■□□□□ 0.22
HMGXB3-201ENST00000502717 GDPD3Q7L5L3 318 aa16.43■□□□□ 0.22
HMGXB3-201ENST00000502717 STOML3Q8TAV4 291 aa16.43■□□□□ 0.22
HMGXB3-201ENST00000502717 MCHR1Q99705 422 aa16.43■□□□□ 0.22
HMGXB3-201ENST00000502717 THAP7Q9BT49 309 aaPredicted RBP16.43■□□□□ 0.22
HMGXB3-201ENST00000502717 HOXD1Q9GZZ0 328 aa16.43■□□□□ 0.22
HMGXB3-201ENST00000502717 TUBB1Q9H4B7 451 aa16.43■□□□□ 0.22
HMGXB3-201ENST00000502717 ZNF385DQ9H6B1 395 aa16.43■□□□□ 0.22
HMGXB3-201ENST00000502717 DOCK2Q92608 1830 aa16.42■□□□□ 0.22
HMGXB3-201ENST00000502717 TCRBV5S2A0A599 114 aa16.42■□□□□ 0.22
HMGXB3-201ENST00000502717 WASHC1A8K0Z3 465 aa16.42■□□□□ 0.22
HMGXB3-201ENST00000502717 EPHX1P07099 455 aa16.42■□□□□ 0.22
HMGXB3-201ENST00000502717 DDX6P26196 483 aaKnown RBP eCLIP16.42■□□□□ 0.223e-6■■■■□ 23.1
HMGXB3-201ENST00000502717 ACTC1P68032 377 aa16.42■□□□□ 0.22
HMGXB3-201ENST00000502717 ACTA1P68133 377 aa16.42■□□□□ 0.22
HMGXB3-201ENST00000502717 AQP6Q13520 282 aa16.42■□□□□ 0.22
HMGXB3-201ENST00000502717 KDM4DQ6B0I6 523 aa16.42■□□□□ 0.22
HMGXB3-201ENST00000502717 TSTD1Q8NFU3 115 aa16.42■□□□□ 0.22
HMGXB3-201ENST00000502717 ZNF566Q969W8 418 aa16.42■□□□□ 0.22
HMGXB3-201ENST00000502717 PDLIM5Q96HC4 596 aaKnown RBP16.42■□□□□ 0.22
HMGXB3-201ENST00000502717 P2RY13Q9BPV8 354 aa16.42■□□□□ 0.22
HMGXB3-201ENST00000502717 SLC12A9Q9BXP2 914 aa16.42■□□□□ 0.22
HMGXB3-201ENST00000502717 ACSL6Q9UKU0 697 aa16.42■□□□□ 0.22
HMGXB3-201ENST00000502717 ECM29Q5VYK3 1845 aa16.42■□□□□ 0.22
HMGXB3-201ENST00000502717 STRCP1A6NGW2 1772 aa16.42■□□□□ 0.22
HMGXB3-201ENST00000502717 PRAF2O60831 178 aa16.42■□□□□ 0.22
HMGXB3-201ENST00000502717 RORAP35398 523 aa16.42■□□□□ 0.22
HMGXB3-201ENST00000502717 VEGFBP49765 207 aa16.42■□□□□ 0.22
HMGXB3-201ENST00000502717 LASP1Q14847 261 aaKnown RBP16.42■□□□□ 0.22
HMGXB3-201ENST00000502717 HACD4Q5VWC8 232 aa16.42■□□□□ 0.22
HMGXB3-201ENST00000502717 LAX1Q8IWV1 398 aa16.42■□□□□ 0.22
HMGXB3-201ENST00000502717 PIANPQ8IYJ0 282 aa16.42■□□□□ 0.22
HMGXB3-201ENST00000502717 CLDN22Q8N7P3 220 aa16.42■□□□□ 0.22
HMGXB3-201ENST00000502717 AIFM2Q9BRQ8 373 aa16.42■□□□□ 0.22
HMGXB3-201ENST00000502717 TRMT61BQ9BVS5 477 aaKnown RBP16.42■□□□□ 0.22
HMGXB3-201ENST00000502717 RBCK1Q9BYM8 510 aa16.42■□□□□ 0.22
HMGXB3-201ENST00000502717 PCDHB16Q9NRJ7 776 aa16.42■□□□□ 0.22
HMGXB3-201ENST00000502717 MRPS33Q9Y291 106 aaKnown RBP16.42■□□□□ 0.22
HMGXB3-201ENST00000502717 MED31Q9Y3C7 131 aa16.42■□□□□ 0.22
HMGXB3-201ENST00000502717 HTR2AP28223 471 aa16.42■□□□□ 0.22
HMGXB3-201ENST00000502717 VIPR1P32241 457 aa16.42■□□□□ 0.22
HMGXB3-201ENST00000502717 MAN2A2P49641 1150 aa16.42■□□□□ 0.22
HMGXB3-201ENST00000502717 GPR17Q13304 367 aa16.42■□□□□ 0.22
HMGXB3-201ENST00000502717 FAM76BQ5HYJ3 339 aa16.42■□□□□ 0.22
HMGXB3-201ENST00000502717 ZNF227Q86WZ6 799 aa16.42■□□□□ 0.22
HMGXB3-201ENST00000502717 ZNF615Q8N8J6 731 aa16.42■□□□□ 0.22
HMGXB3-201ENST00000502717 MEMO1Q9Y316 297 aa16.42■□□□□ 0.22
HMGXB3-201ENST00000502717 NOP16Q9Y3C1 178 aaKnown RBP16.42■□□□□ 0.22
HMGXB3-201ENST00000502717 RBBP9O75884 186 aa16.41■□□□□ 0.22
HMGXB3-201ENST00000502717 KRT33AO76009 404 aa16.41■□□□□ 0.22
HMGXB3-201ENST00000502717 IDSP22304 550 aa16.41■□□□□ 0.22
HMGXB3-201ENST00000502717 CHMP24386 653 aa16.41■□□□□ 0.22
HMGXB3-201ENST00000502717 VLDLRP98155 873 aa16.41■□□□□ 0.22
HMGXB3-201ENST00000502717 UNC5DQ6UXZ4 953 aa16.41■□□□□ 0.22
HMGXB3-201ENST00000502717 OR9A1PQ8NGU1 263 aa16.41■□□□□ 0.22
HMGXB3-201ENST00000502717 OR5J2Q8NH18 312 aa16.41■□□□□ 0.22
HMGXB3-201ENST00000502717 COL22A1Q8NFW1 1626 aaPredicted RBP16.41■□□□□ 0.22
HMGXB3-201ENST00000502717 UGDHO60701 494 aa16.41■□□□□ 0.22
HMGXB3-201ENST00000502717 GSRP00390 522 aa16.41■□□□□ 0.22
HMGXB3-201ENST00000502717 PDGFAP04085 211 aa16.41■□□□□ 0.22
HMGXB3-201ENST00000502717 OR12D1P0DN82 309 aa16.41■□□□□ 0.22
HMGXB3-201ENST00000502717 KCNC1P48547 511 aa16.41■□□□□ 0.22
HMGXB3-201ENST00000502717 RRAS2P62070 204 aaPredicted RBP16.41■□□□□ 0.22
HMGXB3-201ENST00000502717 ARF5P84085 180 aa16.41■□□□□ 0.22
HMGXB3-201ENST00000502717 SLC35F1Q5T1Q4 408 aa16.41■□□□□ 0.22
HMGXB3-201ENST00000502717 PRSS55Q6UWB4 352 aaPredicted RBP16.41■□□□□ 0.22
HMGXB3-201ENST00000502717 C6orf120Q7Z4R8 191 aa16.41■□□□□ 0.22
HMGXB3-201ENST00000502717 TEX37Q96LM6 180 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms