RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 GMNNO75496 209 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 PDE5AO76074 875 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 SEMA3DO95025 777 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 PSMG1O95456 288 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 EML2O95834 649 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 CSF2P04141 144 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 CHRM5P08912 532 aaPredicted RBP5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 COX7A2P14406 83 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 GNSP15586 552 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 CD1EP15812 388 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 SDC1P18827 310 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 IL12AP29459 219 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 TIA1P31483 386 aaKnown RBP eCLIP5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 GCKP35557 465 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 AHRP35869 848 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 HPCAL1P37235 193 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 GSTM5P46439 218 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 ZFP36L2P47974 494 aaKnown RBP5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 TRPC1P48995 793 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 HNRNPFP52597 415 aaKnown RBP5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 ARFIP1P53367 373 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 SH3BGRP55822 239 aaPredicted RBP5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 CLDN6P56747 220 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 EEFSECP57772 596 aaKnown RBP5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 C21orf58P58505 322 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 CSNK1G2P78368 415 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 MEF2AQ02078 507 aaPredicted RBP5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 TGM3Q08188 693 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 C2orf80Q0P641 193 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 BNIP2Q12982 314 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 BIRC2Q13490 618 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 C1orf61Q13536 156 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 BLMHQ13867 455 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 TRIM25Q14258 630 aaKnown RBP5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 PTGR1Q14914 329 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 KPNB1Q14974 876 aaKnown RBP5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 PGS1Q32NB8 556 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 TIGD2Q4W5G0 525 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 TMEM35AQ53FP2 167 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 ZNF542PQ5EBM4 170 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 PIGGQ5H8A4 983 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 PAGE3Q5JUK9 113 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 ARHGAP40Q5TG30 622 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 ANXA8L1Q5VT79 327 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 KHDRBS2Q5VWX1 349 aaKnown RBP5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 ARMC6Q6NXE6 501 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 C8orf82Q6P1X6 216 aaPredicted RBP5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 KLHL35Q6PF15 583 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 CLEC18BQ6UXF7 455 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 DHDDSQ86SQ9 333 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 OOSP2Q86WS3 158 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 HPS6Q86YV9 775 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 RIMKLAQ8IXN7 391 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 ADGRF3Q8IZF5 1079 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 SLC22A18ASQ8N1D0 253 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 METTL4Q8N3J2 472 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 TMEM132CQ8N3T6 1108 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 RNF175Q8N4F7 328 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 DEFB119Q8N690 84 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 NATD1Q8N6N6 113 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 LMNTD1Q8N9Z9 388 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 CLEC18CQ8NCF0 446 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 SRFBP1Q8NEF9 429 aaKnown RBP5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 FAM46DQ8NEK8 389 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 TNIP2Q8NFZ5 429 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 OR2L3Q8NG85 312 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 WDR60Q8WVS4 1066 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 SLC13A3Q8WWT9 602 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 DNASE2BQ8WZ79 361 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 ZUFSPQ96AP4 578 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 VPS33AQ96AX1 596 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 RGMAQ96B86 450 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 MTERF3Q96E29 417 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 TEX37Q96LM6 180 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 LRGUKQ96M69 825 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 TSSK3Q96PN8 268 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 OR52E6Q96RD3 313 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 GPATCH1Q9BRR8 931 aaKnown RBP5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 DPH7Q9BTV6 452 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 SARGQ9BW04 601 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 MS4A8Q9BY19 250 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 TRIM15Q9C019 465 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 OR51B5Q9H339 312 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 MUC13Q9H3R2 512 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 ACTL8Q9H568 366 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 IL1RL2Q9HB29 575 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 TM9SF3Q9HD45 589 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 SLC52A3Q9NQ40 469 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 ATAD3AQ9NVI7 634 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 AURKAIP1Q9NWT8 199 aaPredicted RBP5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 FAM120CQ9NX05 1096 aaKnown RBP5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 PCDHGB4Q9UN71 923 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 SH2B3Q9UQQ2 575 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 DLGAP4Q9Y2H0 992 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 SPAG17Q6Q759 2223 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 PCM1Q15154 2024 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 PTPRBP23467 1997 aa5.02□□□□□ -1.61
HMGXB4-208ENST00000498325 UTP20O75691 2785 aaKnown RBP5.01□□□□□ -1.61
HMGXB4-208ENST00000498325 ZFHX3Q15911 3703 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms