RNA–Protein interactions for RNA: ENST00000498007.1

HLA-B-255, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 1,087 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-255ENST00000498007 PRSS53Q2L4Q9 553 aa18.4■□□□□ 0.54
HLA-B-255ENST00000498007 RNF111Q6ZNA4 994 aa18.4■□□□□ 0.54
HLA-B-255ENST00000498007 C16orf47Q6ZP98 133 aaPredicted RBP18.4■□□□□ 0.54
HLA-B-255ENST00000498007 PRICKLE2Q7Z3G6 844 aa18.4■□□□□ 0.54
HLA-B-255ENST00000498007 CCDC116Q8IYX3 515 aa18.4■□□□□ 0.54
HLA-B-255ENST00000498007 LGI4Q8N135 537 aa18.4■□□□□ 0.54
HLA-B-255ENST00000498007 ADCY4Q8NFM4 1077 aa18.4■□□□□ 0.54
HLA-B-255ENST00000498007 ZNF681Q96N22 645 aa18.4■□□□□ 0.54
HLA-B-255ENST00000498007 BBS4Q96RK4 519 aa18.4■□□□□ 0.54
HLA-B-255ENST00000498007 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.4■□□□□ 0.54
HLA-B-255ENST00000498007 MEAF6Q9HAF1 191 aa18.4■□□□□ 0.54
HLA-B-255ENST00000498007 EIF3LQ9Y262 564 aaKnown RBP18.4■□□□□ 0.54
HLA-B-255ENST00000498007 CROCCQ5TZA2 2017 aa18.39■□□□□ 0.53
HLA-B-255ENST00000498007 FCHO1O14526 889 aa18.39■□□□□ 0.53
HLA-B-255ENST00000498007 NTSP30990 170 aa18.39■□□□□ 0.53
HLA-B-255ENST00000498007 HPCAL1P37235 193 aa18.39■□□□□ 0.53
HLA-B-255ENST00000498007 MLF1P58340 268 aa18.39■□□□□ 0.53
HLA-B-255ENST00000498007 RNF4P78317 190 aa18.39■□□□□ 0.53
HLA-B-255ENST00000498007 PRICKLE4Q2TBC4 344 aa18.39■□□□□ 0.53
HLA-B-255ENST00000498007 FAM111BQ6SJ93 734 aa18.39■□□□□ 0.53
HLA-B-255ENST00000498007 WDR75Q8IWA0 830 aaKnown RBP18.39■□□□□ 0.53
HLA-B-255ENST00000498007 C9orf40Q8IXQ3 194 aa18.39■□□□□ 0.53
HLA-B-255ENST00000498007 SAMD14Q8IZD0 417 aaPredicted RBP18.39■□□□□ 0.53
HLA-B-255ENST00000498007 VWA5B2Q8N398 1253 aa18.39■□□□□ 0.53
HLA-B-255ENST00000498007 CATSPER1Q8NEC5 780 aa18.39■□□□□ 0.53
HLA-B-255ENST00000498007 OR9A2Q8NGT5 310 aa18.39■□□□□ 0.53
HLA-B-255ENST00000498007 PIWIL2Q8TC59 973 aaKnown RBP18.39■□□□□ 0.53
HLA-B-255ENST00000498007 PPCDCQ96CD2 204 aa18.39■□□□□ 0.53
HLA-B-255ENST00000498007 C7orf26Q96N11 449 aa18.39■□□□□ 0.53
HLA-B-255ENST00000498007 GAL3ST4Q96RP7 486 aa18.39■□□□□ 0.53
HLA-B-255ENST00000498007 REEP4Q9H6H4 257 aa18.39■□□□□ 0.53
HLA-B-255ENST00000498007 SLCO1B3Q9NPD5 702 aa18.39■□□□□ 0.53
HLA-B-255ENST00000498007 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.39■□□□□ 0.535e-7■□□□□ 9.4
HLA-B-255ENST00000498007 MAT2BQ9NZL9 334 aa18.39■□□□□ 0.53
HLA-B-255ENST00000498007 NOP53Q9NZM5 478 aaKnown RBP18.39■□□□□ 0.53
HLA-B-255ENST00000498007 ANAPC2Q9UJX6 822 aa18.39■□□□□ 0.53
HLA-B-255ENST00000498007 B3GNT3Q9Y2A9 372 aa18.39■□□□□ 0.53
HLA-B-255ENST00000498007 GOLGA8QA0A0J9YX86 632 aa18.38■□□□□ 0.53
HLA-B-255ENST00000498007 GOLGA8OA6NCC3 632 aa18.38■□□□□ 0.53
HLA-B-255ENST00000498007 OR5H15A6NDH6 313 aa18.38■□□□□ 0.53
HLA-B-255ENST00000498007 TRPC5OSA6NMA1 111 aa18.38■□□□□ 0.53
HLA-B-255ENST00000498007 B8ZZF3 427 aa18.38■□□□□ 0.53
HLA-B-255ENST00000498007 GOLGA8NF8WBI6 632 aa18.38■□□□□ 0.53
HLA-B-255ENST00000498007 SLCO1B7G3V0H7 640 aa18.38■□□□□ 0.53
HLA-B-255ENST00000498007 WWP2O00308 870 aa18.38■□□□□ 0.53
HLA-B-255ENST00000498007 SDHDO14521 159 aa18.38■□□□□ 0.53
HLA-B-255ENST00000498007 VPS4BO75351 444 aa18.38■□□□□ 0.53
HLA-B-255ENST00000498007 ITGA10O75578 1167 aa18.38■□□□□ 0.53
HLA-B-255ENST00000498007 CLPSP04118 112 aa18.38■□□□□ 0.53
HLA-B-255ENST00000498007 PRPS2P11908 318 aa18.38■□□□□ 0.53
HLA-B-255ENST00000498007 CASRP41180 1078 aa18.38■□□□□ 0.53
HLA-B-255ENST00000498007 NCBP2P52298 156 aaKnown RBP eCLIP18.38■□□□□ 0.53
HLA-B-255ENST00000498007 MRPS35P82673 323 aaKnown RBP18.38■□□□□ 0.53
HLA-B-255ENST00000498007 OC90Q02509 493 aaPredicted RBP18.38■□□□□ 0.53
HLA-B-255ENST00000498007 EMX2Q04743 252 aa18.38■□□□□ 0.53
HLA-B-255ENST00000498007 C19orf57Q0VDD7 668 aa18.38■□□□□ 0.53
HLA-B-255ENST00000498007 FAM47EQ6ZV65 393 aa18.38■□□□□ 0.53
HLA-B-255ENST00000498007 SLC29A4Q7RTT9 530 aa18.38■□□□□ 0.53
HLA-B-255ENST00000498007 FAM9CQ8IZT9 166 aa18.38■□□□□ 0.53
HLA-B-255ENST00000498007 CKAP2Q8WWK9 683 aa18.38■□□□□ 0.53
HLA-B-255ENST00000498007 PNPLA2Q96AD5 504 aa18.38■□□□□ 0.53
HLA-B-255ENST00000498007 UTP23Q9BRU9 249 aaKnown RBP18.38■□□□□ 0.53
HLA-B-255ENST00000498007 RNF32Q9H0A6 362 aa18.38■□□□□ 0.53
HLA-B-255ENST00000498007 WDR55Q9H6Y2 383 aaPredicted RBP18.38■□□□□ 0.53
HLA-B-255ENST00000498007 MED4Q9NPJ6 270 aa18.38■□□□□ 0.53
HLA-B-255ENST00000498007 SH3BP4Q9P0V3 963 aa18.38■□□□□ 0.53
HLA-B-255ENST00000498007 SCAMP2O15127 329 aaKnown RBP18.37■□□□□ 0.53
HLA-B-255ENST00000498007 PDPK1O15530 556 aa18.37■□□□□ 0.53
HLA-B-255ENST00000498007 ATP8B1O43520 1251 aa18.37■□□□□ 0.53
HLA-B-255ENST00000498007 OR2J2O76002 312 aa18.37■□□□□ 0.53
HLA-B-255ENST00000498007 G6PDP11413 515 aa18.37■□□□□ 0.53
HLA-B-255ENST00000498007 PCSK2P16519 638 aa18.37■□□□□ 0.53
HLA-B-255ENST00000498007 LBPP18428 481 aa18.37■□□□□ 0.53
HLA-B-255ENST00000498007 EPHA3P29320 983 aa18.37■□□□□ 0.53
HLA-B-255ENST00000498007 MPIP34949 423 aa18.37■□□□□ 0.53
HLA-B-255ENST00000498007 TNFSF10P50591 281 aa18.37■□□□□ 0.53
HLA-B-255ENST00000498007 SLC37A1P57057 533 aa18.37■□□□□ 0.53
HLA-B-255ENST00000498007 TUBA3CQ13748 450 aa18.37■□□□□ 0.53
HLA-B-255ENST00000498007 ZNF169Q14929 603 aaPredicted RBP18.37■□□□□ 0.53
HLA-B-255ENST00000498007 EXOSC7Q15024 291 aaKnown RBP18.37■□□□□ 0.53
HLA-B-255ENST00000498007 TLR1Q15399 786 aa18.37■□□□□ 0.53
HLA-B-255ENST00000498007 ZNF385BQ569K4 471 aa18.37■□□□□ 0.53
HLA-B-255ENST00000498007 ZNF628Q5EBL2 1059 aa18.37■□□□□ 0.53
HLA-B-255ENST00000498007 TUBA3EQ6PEY2 450 aa18.37■□□□□ 0.53
HLA-B-255ENST00000498007 Q6ZS92 163 aa18.37■□□□□ 0.53
HLA-B-255ENST00000498007 OR5L2Q8NGL0 311 aa18.37■□□□□ 0.53
HLA-B-255ENST00000498007 OR8K3Q8NH51 312 aa18.37■□□□□ 0.53
HLA-B-255ENST00000498007 SUN3Q8TAQ9 357 aa18.37■□□□□ 0.53
HLA-B-255ENST00000498007 HAS2Q92819 552 aa18.37■□□□□ 0.53
HLA-B-255ENST00000498007 KAT2AQ92830 837 aa18.37■□□□□ 0.53
HLA-B-255ENST00000498007 CIDECQ96AQ7 238 aaPredicted RBP18.37■□□□□ 0.53
HLA-B-255ENST00000498007 MAGEB18Q96M61 343 aa18.37■□□□□ 0.53
HLA-B-255ENST00000498007 SLAMF7Q9NQ25 335 aa18.37■□□□□ 0.53
HLA-B-255ENST00000498007 MYOTQ9UBF9 498 aa18.37■□□□□ 0.53
HLA-B-255ENST00000498007 BCAP29Q9UHQ4 241 aa18.37■□□□□ 0.53
HLA-B-255ENST00000498007 TMEM200CA6NKL6 621 aa18.36■□□□□ 0.53
HLA-B-255ENST00000498007 MYO1GB0I1T2 1018 aa18.36■□□□□ 0.53
HLA-B-255ENST00000498007 DIO3P55073 304 aa18.36■□□□□ 0.53
HLA-B-255ENST00000498007 MGAT2Q10469 447 aa18.36■□□□□ 0.53
HLA-B-255ENST00000498007 FUT7Q11130 342 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms