RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 PSORS1C1Q9UIG5 152 aa2.45□□□□□ -2.02
SMC4-227ENST00000497984 LIPT1Q9Y234 373 aa2.45□□□□□ -2.02
SMC4-227ENST00000497984 RSPH10B2B2RC85 870 aa2.44□□□□□ -2.02
SMC4-227ENST00000497984 TTI1O43156 1089 aa2.44□□□□□ -2.02
SMC4-227ENST00000497984 CPNE6O95741 557 aa2.44□□□□□ -2.02
SMC4-227ENST00000497984 IGHG3P01860 377 aa2.44□□□□□ -2.02
SMC4-227ENST00000497984 RSPH10BP0C881 870 aa2.44□□□□□ -2.02
SMC4-227ENST00000497984 ZNF17P17021 662 aa2.44□□□□□ -2.02
SMC4-227ENST00000497984 TCF7P36402 384 aaPredicted RBP2.44□□□□□ -2.02
SMC4-227ENST00000497984 MDH2P40926 338 aaKnown RBP2.44□□□□□ -2.02
SMC4-227ENST00000497984 MTIF2P46199 727 aaKnown RBP2.44□□□□□ -2.02
SMC4-227ENST00000497984 SLC25A1P53007 311 aa2.44□□□□□ -2.02
SMC4-227ENST00000497984 CKAP4Q07065 602 aaKnown RBP2.44□□□□□ -2.02
SMC4-227ENST00000497984 HEPACAMQ14CZ8 416 aa2.44□□□□□ -2.02
SMC4-227ENST00000497984 P2RY14Q15391 338 aa2.44□□□□□ -2.02
SMC4-227ENST00000497984 HAGHQ16775 308 aa2.44□□□□□ -2.02
SMC4-227ENST00000497984 MICAQ29983 383 aa2.44□□□□□ -2.02
SMC4-227ENST00000497984 GSG1Q2KHT4 349 aa2.44□□□□□ -2.02
SMC4-227ENST00000497984 UNC50Q53HI1 259 aa2.44□□□□□ -2.02
SMC4-227ENST00000497984 ODF2Q5BJF6 829 aa2.44□□□□□ -2.02
SMC4-227ENST00000497984 SHQ1Q6PI26 577 aaKnown RBP2.44□□□□□ -2.02
SMC4-227ENST00000497984 GCNT7Q6ZNI0 430 aa2.44□□□□□ -2.02
SMC4-227ENST00000497984 FAM47EQ6ZV65 393 aa2.44□□□□□ -2.02
SMC4-227ENST00000497984 OTOAQ7RTW8 1153 aa2.44□□□□□ -2.02
SMC4-227ENST00000497984 ASPGQ86U10 573 aa2.44□□□□□ -2.02
SMC4-227ENST00000497984 WDR49Q8IV35 697 aa2.44□□□□□ -2.02
SMC4-227ENST00000497984 AP2M1Q96CW1 435 aa2.44□□□□□ -2.02
SMC4-227ENST00000497984 MAPKAP1Q9BPZ7 522 aa2.44□□□□□ -2.02
SMC4-227ENST00000497984 ADPGKQ9BRR6 497 aa2.44□□□□□ -2.02
SMC4-227ENST00000497984 CXXC4Q9H2H0 198 aa2.44□□□□□ -2.02
SMC4-227ENST00000497984 ZWILCHQ9H900 591 aa2.44□□□□□ -2.02
SMC4-227ENST00000497984 GDF3Q9NR23 364 aa2.44□□□□□ -2.02
SMC4-227ENST00000497984 KIAA1217Q5T5P2 1943 aa2.43□□□□□ -2.02
SMC4-227ENST00000497984 CCT8L1PA6NM43 557 aa2.43□□□□□ -2.02
SMC4-227ENST00000497984 H0Y626 953 aa2.43□□□□□ -2.02
SMC4-227ENST00000497984 GJB5O95377 273 aa2.43□□□□□ -2.02
SMC4-227ENST00000497984 PRAMEF12O95522 483 aa2.43□□□□□ -2.02
SMC4-227ENST00000497984 NUDT14O95848 222 aa2.43□□□□□ -2.02
SMC4-227ENST00000497984 GAS8O95995 478 aa2.43□□□□□ -2.02
SMC4-227ENST00000497984 CALCAP01258 141 aa2.43□□□□□ -2.02
SMC4-227ENST00000497984 FCER2P06734 321 aa2.43□□□□□ -2.02
SMC4-227ENST00000497984 PGAM2P15259 253 aa2.43□□□□□ -2.02
SMC4-227ENST00000497984 GDF1P27539 372 aa2.43□□□□□ -2.02
SMC4-227ENST00000497984 ARHGDIAP52565 204 aa2.43□□□□□ -2.02
SMC4-227ENST00000497984 MFAP2P55001 183 aa2.43□□□□□ -2.02
SMC4-227ENST00000497984 KCNK10P57789 538 aa2.43□□□□□ -2.02
SMC4-227ENST00000497984 PAX2Q02962 417 aa2.43□□□□□ -2.02
SMC4-227ENST00000497984 KIAA0040Q15053 153 aa2.43□□□□□ -2.02
SMC4-227ENST00000497984 KRT31Q15323 416 aa2.43□□□□□ -2.02
SMC4-227ENST00000497984 TGIF1Q15583 401 aa2.43□□□□□ -2.02
SMC4-227ENST00000497984 STX1AQ16623 288 aa2.43□□□□□ -2.02
SMC4-227ENST00000497984 WSCD2Q2TBF2 565 aa2.43□□□□□ -2.02
SMC4-227ENST00000497984 CCDC158Q5M9N0 1113 aa2.43□□□□□ -2.02
SMC4-227ENST00000497984 DCAF12Q5T6F0 453 aa2.43□□□□□ -2.02
SMC4-227ENST00000497984 KCTD11Q693B1 232 aa2.43□□□□□ -2.02
SMC4-227ENST00000497984 C2orf66Q6UXQ4 117 aa2.43□□□□□ -2.02
SMC4-227ENST00000497984 MOB2Q70IA6 237 aa2.43□□□□□ -2.02
SMC4-227ENST00000497984 GPR142Q7Z601 462 aa2.43□□□□□ -2.02
SMC4-227ENST00000497984 TMEM126BQ8IUX1 230 aa2.43□□□□□ -2.02
SMC4-227ENST00000497984 CCDC83Q8IWF9 413 aa2.43□□□□□ -2.02
SMC4-227ENST00000497984 SIDT2Q8NBJ9 832 aaKnown RBP2.43□□□□□ -2.02
SMC4-227ENST00000497984 OR6M1Q8NGM8 313 aa2.43□□□□□ -2.02
SMC4-227ENST00000497984 LINC01006Q8NI28 216 aa2.43□□□□□ -2.02
SMC4-227ENST00000497984 CRYGNQ8WXF5 182 aa2.43□□□□□ -2.02
SMC4-227ENST00000497984 PRAM1Q96QH2 718 aa2.43□□□□□ -2.02
SMC4-227ENST00000497984 CCT8L2Q96SF2 557 aa2.43□□□□□ -2.02
SMC4-227ENST00000497984 MAGEF1Q9HAY2 307 aa2.43□□□□□ -2.02
SMC4-227ENST00000497984 IL1RL2Q9HB29 575 aa2.43□□□□□ -2.02
SMC4-227ENST00000497984 PNPLA3Q9NST1 481 aa2.43□□□□□ -2.02
SMC4-227ENST00000497984 ABCB8Q9NUT2 735 aa2.43□□□□□ -2.02
SMC4-227ENST00000497984 RAI14Q9P0K7 980 aa2.43□□□□□ -2.02
SMC4-227ENST00000497984 EXOC7Q9UPT5 735 aa2.43□□□□□ -2.02
SMC4-227ENST00000497984 NACAE9PAV3 2078 aa2.43□□□□□ -2.02
SMC4-227ENST00000497984 IGHV3-35A0A0C4DH35 117 aa2.42□□□□□ -2.02
SMC4-227ENST00000497984 SLC15A5A6NIM6 579 aa2.42□□□□□ -2.02
SMC4-227ENST00000497984 TNFSF11O14788 317 aa2.42□□□□□ -2.02
SMC4-227ENST00000497984 NME6O75414 186 aaPredicted RBP2.42□□□□□ -2.02
SMC4-227ENST00000497984 LYPD3O95274 346 aa2.42□□□□□ -2.02
SMC4-227ENST00000497984 TXNDC12O95881 172 aa2.42□□□□□ -2.02
SMC4-227ENST00000497984 GOT2P00505 430 aaKnown RBP2.42□□□□□ -2.02
SMC4-227ENST00000497984 MBL2P11226 248 aaPredicted RBP2.42□□□□□ -2.02
SMC4-227ENST00000497984 CPA3P15088 417 aa2.42□□□□□ -2.02
SMC4-227ENST00000497984 STIP1P31948 543 aaKnown RBP2.42□□□□□ -2.02
SMC4-227ENST00000497984 MAGEA9P43362 315 aa2.42□□□□□ -2.02
SMC4-227ENST00000497984 CXCL6P80162 114 aa2.42□□□□□ -2.02
SMC4-227ENST00000497984 PRKCEQ02156 737 aa2.42□□□□□ -2.02
SMC4-227ENST00000497984 RPS6KA1Q15418 735 aa2.42□□□□□ -2.02
SMC4-227ENST00000497984 SHROOM1Q2M3G4 852 aaPredicted RBP2.42□□□□□ -2.02
SMC4-227ENST00000497984 MPPE1Q53F39 396 aa2.42□□□□□ -2.02
SMC4-227ENST00000497984 STOX1Q6ZVD7 989 aa2.42□□□□□ -2.02
SMC4-227ENST00000497984 UBQLNLQ8IYU4 475 aa2.42□□□□□ -2.02
SMC4-227ENST00000497984 NKAIN3Q8N8D7 197 aa2.42□□□□□ -2.02
SMC4-227ENST00000497984 HAS2Q92819 552 aa2.42□□□□□ -2.02
SMC4-227ENST00000497984 TSPYL1Q9H0U9 437 aa2.42□□□□□ -2.02
SMC4-227ENST00000497984 GANQ9H2C0 597 aa2.42□□□□□ -2.02
SMC4-227ENST00000497984 DNAJC11Q9NVH1 559 aa2.42□□□□□ -2.02
SMC4-227ENST00000497984 RCOR3Q9P2K3 495 aaPredicted RBP2.42□□□□□ -2.02
SMC4-227ENST00000497984 TUBGCP4Q9UGJ1 667 aa2.42□□□□□ -2.02
SMC4-227ENST00000497984 A0A0A6YYD4 124 aa2.41□□□□□ -2.02
SMC4-227ENST00000497984 TCP11X1B4DZS4 312 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms