RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 APBB3O95704 486 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 GASTP01350 101 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 LCKP06239 509 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 CDK1P06493 297 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 H1F0P07305 194 aaKnown RBP12.31□□□□□ -0.44
GARNL3-220ENST00000496711 ASGR2P07307 311 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 FHP07954 510 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 F3P13726 295 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 HNRNPA2B1P22626 353 aaKnown RBP12.31□□□□□ -0.44
GARNL3-220ENST00000496711 ACTR1BP42025 376 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 CTSKP43235 329 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 CRISP1P54107 249 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 ACTR1AP61163 376 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 MRPS21P82921 87 aaKnown RBP12.31□□□□□ -0.44
GARNL3-220ENST00000496711 GNA13Q14344 377 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 PTGES3Q15185 160 aaKnown RBP12.31□□□□□ -0.44
GARNL3-220ENST00000496711 DCST1Q5T197 706 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 C18orf63Q68DL7 685 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 KLHL35Q6PF15 583 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 ZBTB46Q86UZ6 589 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 OR4D11Q8NGI4 311 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 ITPAQ9BY32 194 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 SRMSQ9H3Y6 488 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 BCL2L10Q9HD36 194 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 CLDND1Q9NY35 253 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 ZNF624Q9P2J8 865 aaPredicted RBP12.31□□□□□ -0.44
GARNL3-220ENST00000496711 ACAD8Q9UKU7 415 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 CES1P1Q9UKY3 287 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 MGAT4BQ9UQ53 548 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 SCN3AQ9NY46 2000 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 SH3PXD2BA1X283 911 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 MPZL2O60487 215 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 SEMA7AO75326 666 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 UGT2B17O75795 530 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 ALPPL2P10696 532 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 NDUFV2P19404 249 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 CSNK2A2P19784 350 aaPredicted RBP12.31□□□□□ -0.44
GARNL3-220ENST00000496711 CHMP24386 653 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 ACSL1P33121 698 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 PTGER1P34995 402 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 TGFBR2P37173 567 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 SLC19A1P41440 591 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 NUDT6P53370 316 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 PRKAG1P54619 331 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 SMIM11AP58511 58 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 PRR5P85299 388 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 DUSP2Q05923 314 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 RGS1Q08116 209 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 FUT5Q11128 374 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 FOXD4Q12950 439 aaPredicted RBP12.31□□□□□ -0.44
GARNL3-220ENST00000496711 LASP1Q14847 261 aaKnown RBP12.31□□□□□ -0.44
GARNL3-220ENST00000496711 TMEM107Q6UX40 140 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 VN1R4Q7Z5H5 301 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 ASPGQ86U10 573 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 FNDC8Q8TC99 324 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 GGHQ92820 318 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 TSACCQ96A04 125 aaPredicted RBP12.31□□□□□ -0.44
GARNL3-220ENST00000496711 SLC22A18Q96BI1 424 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 BMFQ96LC9 184 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 SPATA5L1Q9BVQ7 753 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 BTBD2Q9BX70 525 aa12.31□□□□□ -0.44
GARNL3-220ENST00000496711 RANBP2P49792 3224 aaKnown RBP12.31□□□□□ -0.44
GARNL3-220ENST00000496711 CLDN24A6NM45 220 aa12.3□□□□□ -0.44
GARNL3-220ENST00000496711 M0R129 80 aa12.3□□□□□ -0.44
GARNL3-220ENST00000496711 TNFRSF10CO14798 259 aa12.3□□□□□ -0.44
GARNL3-220ENST00000496711 PROM1O43490 865 aa12.3□□□□□ -0.44
GARNL3-220ENST00000496711 RASGRP1O95267 797 aa12.3□□□□□ -0.44
GARNL3-220ENST00000496711 HMGN2P05204 90 aaKnown RBP12.3□□□□□ -0.44
GARNL3-220ENST00000496711 C8orf89P0DMQ9 161 aa12.3□□□□□ -0.44
GARNL3-220ENST00000496711 NR2F6P10588 404 aa12.3□□□□□ -0.44
GARNL3-220ENST00000496711 BMXP51813 675 aa12.3□□□□□ -0.44
GARNL3-220ENST00000496711 UGT2B15P54855 530 aa12.3□□□□□ -0.44
GARNL3-220ENST00000496711 MLLT10P55197 1068 aa12.3□□□□□ -0.44
GARNL3-220ENST00000496711 SEC23BQ15437 767 aa12.3□□□□□ -0.44
GARNL3-220ENST00000496711 CEBPEQ15744 281 aa12.3□□□□□ -0.44
GARNL3-220ENST00000496711 ZNF750Q32MQ0 723 aa12.3□□□□□ -0.44
GARNL3-220ENST00000496711 PRRT3Q5FWE3 981 aa12.3□□□□□ -0.44
GARNL3-220ENST00000496711 NRROSQ86YC3 692 aa12.3□□□□□ -0.44
GARNL3-220ENST00000496711 RBM45Q8IUH3 476 aaKnown RBP12.3□□□□□ -0.44
GARNL3-220ENST00000496711 LACC1Q8IV20 430 aa12.3□□□□□ -0.44
GARNL3-220ENST00000496711 CCDC116Q8IYX3 515 aa12.3□□□□□ -0.44
GARNL3-220ENST00000496711 CCL4L1Q8NHW4 92 aa12.3□□□□□ -0.44
GARNL3-220ENST00000496711 NDNFQ8TB73 568 aa12.3□□□□□ -0.44
GARNL3-220ENST00000496711 NT5CQ8TCD5 201 aa12.3□□□□□ -0.44
GARNL3-220ENST00000496711 MIPOL1Q8TD10 442 aa12.3□□□□□ -0.44
GARNL3-220ENST00000496711 HSPBAP1Q96EW2 488 aa12.3□□□□□ -0.44
GARNL3-220ENST00000496711 OTUB1Q96FW1 271 aaPredicted RBP12.3□□□□□ -0.44
GARNL3-220ENST00000496711 UCK2Q9BZX2 261 aa12.3□□□□□ -0.44
GARNL3-220ENST00000496711 KCNK12Q9HB15 430 aa12.3□□□□□ -0.44
GARNL3-220ENST00000496711 AMBNQ9NP70 447 aa12.3□□□□□ -0.44
GARNL3-220ENST00000496711 PALMDQ9NP74 551 aa12.3□□□□□ -0.44
GARNL3-220ENST00000496711 ETAA1Q9NY74 926 aa12.3□□□□□ -0.44
GARNL3-220ENST00000496711 GPR83Q9NYM4 423 aa12.3□□□□□ -0.44
GARNL3-220ENST00000496711 SELENONQ9NZV5 590 aa12.3□□□□□ -0.44
GARNL3-220ENST00000496711 SLC9A8Q9Y2E8 581 aa12.3□□□□□ -0.44
GARNL3-220ENST00000496711 ARHGEF17Q96PE2 2063 aaPredicted RBP12.3□□□□□ -0.44
GARNL3-220ENST00000496711 A6NCN8 305 aa12.29□□□□□ -0.44
GARNL3-220ENST00000496711 LRRC72A6NJI9 287 aa12.29□□□□□ -0.44
GARNL3-220ENST00000496711 M0R3G1 203 aa12.29□□□□□ -0.44
GARNL3-220ENST00000496711 M0R3H8 397 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms