RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 ZNF675Q8TD23 568 aa20.32■□□□□ 0.84
C9orf3-222ENST00000496567 ART5Q96L15 291 aa20.32■□□□□ 0.84
C9orf3-222ENST00000496567 WDR77Q9BQA1 342 aaPredicted RBP20.32■□□□□ 0.84
C9orf3-222ENST00000496567 RMND5AQ9H871 391 aa20.32■□□□□ 0.84
C9orf3-222ENST00000496567 ARMCX1Q9P291 453 aa20.32■□□□□ 0.84
C9orf3-222ENST00000496567 PCDHGB4Q9UN71 923 aa20.32■□□□□ 0.84
C9orf3-222ENST00000496567 FRYQ5TBA9 3013 aa20.31■□□□□ 0.84
C9orf3-222ENST00000496567 A0A087WV48 116 aa20.31■□□□□ 0.84
C9orf3-222ENST00000496567 SCN2BO60939 215 aa20.31■□□□□ 0.84
C9orf3-222ENST00000496567 SEC24DO94855 1032 aaPredicted RBP20.31■□□□□ 0.84
C9orf3-222ENST00000496567 HPP00738 406 aa20.31■□□□□ 0.84
C9orf3-222ENST00000496567 PRKAR1AP10644 381 aa20.31■□□□□ 0.84
C9orf3-222ENST00000496567 GPC1P35052 558 aa20.31■□□□□ 0.84
C9orf3-222ENST00000496567 PGDP52209 483 aa20.31■□□□□ 0.84
C9orf3-222ENST00000496567 CDC20Q12834 499 aa20.31■□□□□ 0.84
C9orf3-222ENST00000496567 HSPB3Q12988 150 aa20.31■□□□□ 0.84
C9orf3-222ENST00000496567 ATP1A4Q13733 1029 aa20.31■□□□□ 0.84
C9orf3-222ENST00000496567 PRICKLE4Q2TBC4 344 aa20.31■□□□□ 0.84
C9orf3-222ENST00000496567 DGAT2L6Q6ZPD8 337 aa20.31■□□□□ 0.84
C9orf3-222ENST00000496567 GK5Q6ZS86 529 aa20.31■□□□□ 0.84
C9orf3-222ENST00000496567 ZNF551Q7Z340 670 aaPredicted RBP20.31■□□□□ 0.84
C9orf3-222ENST00000496567 OR9A2Q8NGT5 310 aa20.31■□□□□ 0.84
C9orf3-222ENST00000496567 FER1L6-AS2Q96M78 137 aa20.31■□□□□ 0.84
C9orf3-222ENST00000496567 CCDC106Q9BWC9 280 aa20.31■□□□□ 0.84
C9orf3-222ENST00000496567 NEUROD4Q9HD90 331 aa20.31■□□□□ 0.84
C9orf3-222ENST00000496567 BTNL2Q9UIR0 455 aa20.31■□□□□ 0.84
C9orf3-222ENST00000496567 FBXL4Q9UKA2 621 aa20.31■□□□□ 0.84
C9orf3-222ENST00000496567 TAF4O00268 1085 aa20.3■□□□□ 0.84
C9orf3-222ENST00000496567 SNRPB2P08579 225 aaKnown RBP20.3■□□□□ 0.84
C9orf3-222ENST00000496567 ICAM2P13598 275 aa20.3■□□□□ 0.84
C9orf3-222ENST00000496567 EFNA1P20827 205 aaPredicted RBP20.3■□□□□ 0.84
C9orf3-222ENST00000496567 ZNF267Q14586 743 aaPredicted RBP20.3■□□□□ 0.84
C9orf3-222ENST00000496567 EXT1Q16394 746 aa20.3■□□□□ 0.84
C9orf3-222ENST00000496567 MAPKAPK3Q16644 382 aa20.3■□□□□ 0.84
C9orf3-222ENST00000496567 ZNF628Q5EBL2 1059 aa20.3■□□□□ 0.84
C9orf3-222ENST00000496567 VWA5B2Q8N398 1253 aa20.3■□□□□ 0.84
C9orf3-222ENST00000496567 ADCY4Q8NFM4 1077 aa20.3■□□□□ 0.84
C9orf3-222ENST00000496567 VPS33AQ96AX1 596 aa20.3■□□□□ 0.84
C9orf3-222ENST00000496567 ERP27Q96DN0 273 aa20.3■□□□□ 0.84
C9orf3-222ENST00000496567 SLC25A23Q9BV35 468 aa20.3■□□□□ 0.84
C9orf3-222ENST00000496567 MAT2BQ9NZL9 334 aa20.3■□□□□ 0.84
C9orf3-222ENST00000496567 POLHQ9Y253 713 aa20.3■□□□□ 0.84
C9orf3-222ENST00000496567 URB1O60287 2271 aaKnown RBP20.3■□□□□ 0.84
C9orf3-222ENST00000496567 A0A1W2PP18 115 aa20.29■□□□□ 0.84
C9orf3-222ENST00000496567 C6orf47O95873 294 aa20.29■□□□□ 0.84
C9orf3-222ENST00000496567 IFI6P09912 130 aa20.29■□□□□ 0.84
C9orf3-222ENST00000496567 LTB4RQ15722 352 aa20.29■□□□□ 0.84
C9orf3-222ENST00000496567 VPS26BQ4G0F5 336 aa20.29■□□□□ 0.84
C9orf3-222ENST00000496567 ATP1A1-AS1Q5TC04 95 aa20.29■□□□□ 0.84
C9orf3-222ENST00000496567 B3GNT7Q8NFL0 401 aa20.29■□□□□ 0.84
C9orf3-222ENST00000496567 CTHRC1Q96CG8 243 aa20.29■□□□□ 0.84
C9orf3-222ENST00000496567 SENP5Q96HI0 755 aaPredicted RBP20.29■□□□□ 0.84
C9orf3-222ENST00000496567 FBXL20Q96IG2 436 aa20.29■□□□□ 0.84
C9orf3-222ENST00000496567 IMMP1LQ96LU5 166 aa20.29■□□□□ 0.84
C9orf3-222ENST00000496567 CCDC115Q96NT0 180 aa20.29■□□□□ 0.84
C9orf3-222ENST00000496567 CNPPD1Q9BV87 410 aa20.29■□□□□ 0.84
C9orf3-222ENST00000496567 OR8D2Q9GZM6 311 aa20.29■□□□□ 0.84
C9orf3-222ENST00000496567 SLC52A3Q9NQ40 469 aa20.29■□□□□ 0.84
C9orf3-222ENST00000496567 TAS2R9Q9NYW1 312 aa20.29■□□□□ 0.84
C9orf3-222ENST00000496567 PPIEQ9UNP9 301 aaKnown RBP20.29■□□□□ 0.84
C9orf3-222ENST00000496567 PLOD2O00469 737 aa20.29■□□□□ 0.84
C9orf3-222ENST00000496567 CT62P0C5K7 136 aa20.29■□□□□ 0.84
C9orf3-222ENST00000496567 CAPN3P20807 821 aa20.29■□□□□ 0.84
C9orf3-222ENST00000496567 RRADP55042 308 aa20.29■□□□□ 0.84
C9orf3-222ENST00000496567 TMPRSS3P57727 454 aa20.29■□□□□ 0.84
C9orf3-222ENST00000496567 SLC26A5P58743 744 aa20.29■□□□□ 0.84
C9orf3-222ENST00000496567 AP2B1P63010 937 aa20.29■□□□□ 0.84
C9orf3-222ENST00000496567 MGAT2Q10469 447 aa20.29■□□□□ 0.84
C9orf3-222ENST00000496567 PLAG1Q6DJT9 500 aa20.29■□□□□ 0.84
C9orf3-222ENST00000496567 ANKRD46Q86W74 232 aa20.29■□□□□ 0.84
C9orf3-222ENST00000496567 CLECL1Q8IZS7 167 aa20.29■□□□□ 0.84
C9orf3-222ENST00000496567 TMEM102Q8N9M5 508 aaPredicted RBP20.29■□□□□ 0.84
C9orf3-222ENST00000496567 NFAM1Q8NET5 270 aaPredicted RBP20.29■□□□□ 0.84
C9orf3-222ENST00000496567 OR4A15Q8NGL6 344 aa20.29■□□□□ 0.84
C9orf3-222ENST00000496567 PSMA8Q8TAA3 256 aa20.29■□□□□ 0.84
C9orf3-222ENST00000496567 SLC2A12Q8TD20 617 aa20.29■□□□□ 0.84
C9orf3-222ENST00000496567 KAT2AQ92830 837 aa20.29■□□□□ 0.84
C9orf3-222ENST00000496567 ITCHQ96J02 903 aa20.29■□□□□ 0.84
C9orf3-222ENST00000496567 ZNF160Q9HCG1 818 aa20.29■□□□□ 0.84
C9orf3-222ENST00000496567 PTGFRNQ9P2B2 879 aa20.29■□□□□ 0.84
C9orf3-222ENST00000496567 COPS7AQ9UBW8 275 aa20.29■□□□□ 0.84
C9orf3-222ENST00000496567 ERVK-19Q9WJR5 959 aa20.29■□□□□ 0.84
C9orf3-222ENST00000496567 NDUFAF1Q9Y375 327 aa20.29■□□□□ 0.84
C9orf3-222ENST00000496567 A0A087WV62 115 aa20.28■□□□□ 0.84
C9orf3-222ENST00000496567 ANGPT2O15123 496 aa20.28■□□□□ 0.84
C9orf3-222ENST00000496567 PLOD3O60568 738 aa20.28■□□□□ 0.84
C9orf3-222ENST00000496567 BCAS2O75934 225 aaPredicted RBP20.28■□□□□ 0.84
C9orf3-222ENST00000496567 DDAH2O95865 285 aa20.28■□□□□ 0.84
C9orf3-222ENST00000496567 PTGER1P34995 402 aa20.28■□□□□ 0.84
C9orf3-222ENST00000496567 HBA1P69905 142 aa20.28■□□□□ 0.84
C9orf3-222ENST00000496567 FUT7Q11130 342 aa20.28■□□□□ 0.84
C9orf3-222ENST00000496567 CYLC2Q14093 348 aaPredicted RBP20.28■□□□□ 0.84
C9orf3-222ENST00000496567 BTBD16Q32M84 506 aa20.28■□□□□ 0.84
C9orf3-222ENST00000496567 FAM111BQ6SJ93 734 aa20.28■□□□□ 0.84
C9orf3-222ENST00000496567 TMEM107Q6UX40 140 aa20.28■□□□□ 0.84
C9orf3-222ENST00000496567 OR7G1Q8NGA0 311 aa20.28■□□□□ 0.84
C9orf3-222ENST00000496567 OR1N1Q8NGS0 311 aa20.28■□□□□ 0.84
C9orf3-222ENST00000496567 RP9Q8TA86 221 aaKnown RBP20.28■□□□□ 0.84
C9orf3-222ENST00000496567 M1APQ8TC57 530 aa20.28■□□□□ 0.84
C9orf3-222ENST00000496567 ELP4Q96EB1 424 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms