RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 LIPT1Q9Y234 373 aa8.1□□□□□ -1.11
U2AF1-212ENST00000496462 DTNAQ9Y4J8 743 aa8.1□□□□□ -1.11
U2AF1-212ENST00000496462 C9orf172C9J069 976 aa8.1□□□□□ -1.11
U2AF1-212ENST00000496462 DNAJA2O60884 412 aa8.1□□□□□ -1.11
U2AF1-212ENST00000496462 SCELO95171 688 aa8.1□□□□□ -1.11
U2AF1-212ENST00000496462 GALNSP34059 522 aa8.1□□□□□ -1.11
U2AF1-212ENST00000496462 SEC24CP53992 1094 aa8.1□□□□□ -1.11
U2AF1-212ENST00000496462 KRT72Q14CN4 511 aa8.1□□□□□ -1.11
U2AF1-212ENST00000496462 LARS2Q15031 903 aaKnown RBP8.1□□□□□ -1.11
U2AF1-212ENST00000496462 FAM199XQ6PEV8 388 aaPredicted RBP8.1□□□□□ -1.11
U2AF1-212ENST00000496462 RRM2BQ7LG56 351 aa8.1□□□□□ -1.11
U2AF1-212ENST00000496462 OR4N5Q8IXE1 308 aa8.1□□□□□ -1.11
U2AF1-212ENST00000496462 GPALPP1Q8IXQ4 340 aa8.1□□□□□ -1.11
U2AF1-212ENST00000496462 RASSF5Q8WWW0 418 aa8.1□□□□□ -1.11
U2AF1-212ENST00000496462 MENTQ9BUN1 341 aa8.1□□□□□ -1.11
U2AF1-212ENST00000496462 ZNF160Q9HCG1 818 aa8.1□□□□□ -1.11
U2AF1-212ENST00000496462 FOXJ2Q9P0K8 574 aa8.1□□□□□ -1.11
U2AF1-212ENST00000496462 CTSFQ9UBX1 484 aa8.1□□□□□ -1.11
U2AF1-212ENST00000496462 PKD1L2Q7Z442 2459 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 NRP2O60462 931 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 EEDO75530 441 aaKnown RBP8.09□□□□□ -1.11
U2AF1-212ENST00000496462 NPPAP01160 153 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 PGRP06401 933 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 SDC1P18827 310 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 PRDX6P30041 224 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 FBXW4P57775 412 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 POU6F2P78424 691 aaPredicted RBP8.09□□□□□ -1.11
U2AF1-212ENST00000496462 DNAJC14Q6Y2X3 702 aaPredicted RBP8.09□□□□□ -1.11
U2AF1-212ENST00000496462 DHDDSQ86SQ9 333 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 FAM13CQ8NE31 585 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 NUP43Q8NFH3 380 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 M1APQ8TC57 530 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 XAGE5Q8WWM1 108 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 C10orf90Q96M02 699 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 MS4A4EQ96PG1 132 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 HOPXQ9BPY8 73 aaPredicted RBP8.09□□□□□ -1.11
U2AF1-212ENST00000496462 SPNS1Q9H2V7 528 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 AGPAT4Q9NRZ5 378 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 SIRT5Q9NXA8 310 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 KLRF1Q9NZS2 232 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 SH2B3Q9UQQ2 575 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 ERVK-19Q9WJR5 959 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 PPP6CO00743 305 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 SCDO00767 359 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 LSM1O15116 133 aaKnown RBP8.09□□□□□ -1.11
U2AF1-212ENST00000496462 GYG2O15488 501 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 SNX3O60493 162 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 LDB3O75112 727 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 DLGAP3O95886 979 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 SBK3P0C264 359 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 GABPB1Q06547 395 aaPredicted RBP8.09□□□□□ -1.11
U2AF1-212ENST00000496462 RUNX2Q13950 521 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 UGT8Q16880 541 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 ISLR2Q6UXK2 745 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 SNX32Q86XE0 403 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 TMCO5AQ8N6Q1 288 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 OR5T3Q8NGG3 340 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 VN1R1Q9GZP7 353 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 IL1RL2Q9HB29 575 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 STMN3Q9NZ72 180 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 ATG4BQ9Y4P1 393 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 SPEGQ15772 3267 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 PRORSD1PA6NEY8 169 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 KLRC4-KLRK1H3BQV0 150 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 SLC28A2O43868 658 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 HOXB6P17509 224 aaKnown RBP8.09□□□□□ -1.11
U2AF1-212ENST00000496462 SLC6A2P23975 617 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 CSRP3P50461 194 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 NUDT2P50583 147 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 CRISP3P54108 245 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 FOXA1P55317 472 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 SLC9B1Q4ZJI4 515 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 CRB2Q5IJ48 1285 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 TBCELQ5QJ74 424 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 GCNT6Q5T4J0 391 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 OR4F3Q6IEY1 312 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 GK5Q6ZS86 529 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 MRGPREQ86SM8 312 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 CYP4Z1Q86W10 505 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 ZC3H7AQ8IWR0 971 aaKnown RBP8.09□□□□□ -1.11
U2AF1-212ENST00000496462 PEX5LQ8IYB4 626 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 BHLHE22Q8NFJ8 381 aaPredicted RBP8.09□□□□□ -1.11
U2AF1-212ENST00000496462 OR4K17Q8NGC6 315 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 TESCQ96BS2 214 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 MOCOSQ96EN8 888 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 RNF31Q96EP0 1072 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 HSPBAP1Q96EW2 488 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 SORBS1Q9BX66 1292 aaKnown RBP8.09□□□□□ -1.11
U2AF1-212ENST00000496462 BTNL2Q9UIR0 455 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 FBXL4Q9UKA2 621 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 ACSL6Q9UKU0 697 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 YARS2Q9Y2Z4 477 aaKnown RBP8.09□□□□□ -1.11
U2AF1-212ENST00000496462 ASB1Q9Y576 335 aa8.09□□□□□ -1.11
U2AF1-212ENST00000496462 FRYQ5TBA9 3013 aa8.09□□□□□ -1.12
U2AF1-212ENST00000496462 A0A0A6YYD5 115 aa8.08□□□□□ -1.12
U2AF1-212ENST00000496462 TRAV17A0A0B4J275 112 aa8.08□□□□□ -1.12
U2AF1-212ENST00000496462 SAGE2PA6NJ88 616 aa8.08□□□□□ -1.12
U2AF1-212ENST00000496462 RNASET2O00584 256 aaKnown RBP8.08□□□□□ -1.12
U2AF1-212ENST00000496462 LIFP15018 202 aa8.08□□□□□ -1.12
U2AF1-212ENST00000496462 TPP2P29144 1249 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms