RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 NPIPB8E9PQR5 432 aa10.34□□□□□ -0.75
APTX-230ENST00000494649 DYNC1I1O14576 645 aa10.34□□□□□ -0.75
APTX-230ENST00000494649 ZNF195O14628 629 aa10.34□□□□□ -0.75
APTX-230ENST00000494649 DYRK3O43781 588 aa10.34□□□□□ -0.75
APTX-230ENST00000494649 SNUPNO95149 360 aaKnown RBP10.34□□□□□ -0.75
APTX-230ENST00000494649 PCSK2P16519 638 aa10.34□□□□□ -0.75
APTX-230ENST00000494649 CSNK2A2P19784 350 aaPredicted RBP10.34□□□□□ -0.75
APTX-230ENST00000494649 SOX8P57073 446 aa10.34□□□□□ -0.75
APTX-230ENST00000494649 MPEG1Q2M385 716 aa10.34□□□□□ -0.75
APTX-230ENST00000494649 CRB2Q5IJ48 1285 aa10.34□□□□□ -0.75
APTX-230ENST00000494649 ACER2Q5QJU3 275 aa10.34□□□□□ -0.75
APTX-230ENST00000494649 HSDL2Q6YN16 418 aa10.34□□□□□ -0.75
APTX-230ENST00000494649 LARP4Q71RC2 724 aaKnown RBP eCLIP10.34□□□□□ -0.75
APTX-230ENST00000494649 ZNF551Q7Z340 670 aaPredicted RBP10.34□□□□□ -0.75
APTX-230ENST00000494649 C9orf40Q8IXQ3 194 aa10.34□□□□□ -0.75
APTX-230ENST00000494649 RBMXL3Q8N7X1 1067 aaKnown RBP10.34□□□□□ -0.75
APTX-230ENST00000494649 TEX19Q8NA77 164 aa10.34□□□□□ -0.75
APTX-230ENST00000494649 SUN3Q8TAQ9 357 aa10.34□□□□□ -0.75
APTX-230ENST00000494649 FAM76AQ8TAV0 307 aa10.34□□□□□ -0.75
APTX-230ENST00000494649 PPCDCQ96CD2 204 aa10.34□□□□□ -0.75
APTX-230ENST00000494649 REEP4Q9H6H4 257 aa10.34□□□□□ -0.75
APTX-230ENST00000494649 EPS8L2Q9H6S3 715 aa10.34□□□□□ -0.75
APTX-230ENST00000494649 NOP53Q9NZM5 478 aaKnown RBP10.34□□□□□ -0.75
APTX-230ENST00000494649 BCAP29Q9UHQ4 241 aa10.34□□□□□ -0.75
APTX-230ENST00000494649 DTX4Q9Y2E6 619 aa10.34□□□□□ -0.75
APTX-230ENST00000494649 ATP8B1O43520 1251 aa10.34□□□□□ -0.75
APTX-230ENST00000494649 C1QL1O75973 258 aa10.34□□□□□ -0.75
APTX-230ENST00000494649 OR2J2O76002 312 aa10.34□□□□□ -0.75
APTX-230ENST00000494649 LBPP18428 481 aa10.34□□□□□ -0.75
APTX-230ENST00000494649 MAPK1P28482 360 aa10.34□□□□□ -0.75
APTX-230ENST00000494649 SOX18P35713 384 aa10.34□□□□□ -0.75
APTX-230ENST00000494649 AQP5P55064 265 aa10.34□□□□□ -0.75
APTX-230ENST00000494649 RNF4P78317 190 aa10.34□□□□□ -0.75
APTX-230ENST00000494649 OC90Q02509 493 aaPredicted RBP10.34□□□□□ -0.75
APTX-230ENST00000494649 EMX2Q04743 252 aa10.34□□□□□ -0.75
APTX-230ENST00000494649 PRICKLE4Q2TBC4 344 aa10.34□□□□□ -0.75
APTX-230ENST00000494649 TMEM107Q6UX40 140 aa10.34□□□□□ -0.75
APTX-230ENST00000494649 TMEM64Q6YI46 380 aa10.34□□□□□ -0.75
APTX-230ENST00000494649 SZRD1Q7Z422 152 aa10.34□□□□□ -0.75
APTX-230ENST00000494649 RPS19BP1Q86WX3 136 aaKnown RBP10.34□□□□□ -0.75
APTX-230ENST00000494649 VWA5B2Q8N398 1253 aa10.34□□□□□ -0.75
APTX-230ENST00000494649 SLC5A8Q8N695 610 aa10.34□□□□□ -0.75
APTX-230ENST00000494649 MORN4Q8NDC4 146 aa10.34□□□□□ -0.75
APTX-230ENST00000494649 NPHS2Q9NP85 383 aa10.34□□□□□ -0.75
APTX-230ENST00000494649 GIMAP4Q9NUV9 329 aa10.34□□□□□ -0.75
APTX-230ENST00000494649 MAT2BQ9NZL9 334 aa10.34□□□□□ -0.75
APTX-230ENST00000494649 TUBD1Q9UJT1 453 aa10.34□□□□□ -0.75
APTX-230ENST00000494649 DCTN4Q9UJW0 460 aa10.34□□□□□ -0.75
APTX-230ENST00000494649 ZNF451Q9Y4E5 1061 aa10.34□□□□□ -0.75
APTX-230ENST00000494649 RELNP78509 3460 aa10.33□□□□□ -0.76
APTX-230ENST00000494649 TMEM200CA6NKL6 621 aa10.33□□□□□ -0.76
APTX-230ENST00000494649 TRPC5OSA6NMA1 111 aa10.33□□□□□ -0.76
APTX-230ENST00000494649 E9PBE3 544 aa10.33□□□□□ -0.76
APTX-230ENST00000494649 PYCARD-AS1I3L0S3 204 aa10.33□□□□□ -0.76
APTX-230ENST00000494649 KLHL41O60662 606 aa10.33□□□□□ -0.76
APTX-230ENST00000494649 ZNF354AO60765 605 aaPredicted RBP10.33□□□□□ -0.76
APTX-230ENST00000494649 ITGA10O75578 1167 aa10.33□□□□□ -0.76
APTX-230ENST00000494649 CLPSP04118 112 aa10.33□□□□□ -0.76
APTX-230ENST00000494649 IGKV3-11P04433 115 aa10.33□□□□□ -0.76
APTX-230ENST00000494649 ATP1B1P05026 303 aa10.33□□□□□ -0.76
APTX-230ENST00000494649 LAMP1P11279 417 aa10.33□□□□□ -0.76
APTX-230ENST00000494649 SOX11P35716 441 aa10.33□□□□□ -0.76
APTX-230ENST00000494649 MC3RP41968 323 aa10.33□□□□□ -0.76
APTX-230ENST00000494649 DUSP8Q13202 625 aa10.33□□□□□ -0.76
APTX-230ENST00000494649 MFAP5Q13361 173 aa10.33□□□□□ -0.76
APTX-230ENST00000494649 TERF2Q15554 542 aa10.33□□□□□ -0.76
APTX-230ENST00000494649 PGS1Q32NB8 556 aa10.33□□□□□ -0.76
APTX-230ENST00000494649 C6orf163Q5TEZ5 329 aa10.33□□□□□ -0.76
APTX-230ENST00000494649 SPINK14Q6IE38 97 aa10.33□□□□□ -0.76
APTX-230ENST00000494649 RNF111Q6ZNA4 994 aa10.33□□□□□ -0.76
APTX-230ENST00000494649 IKBIPQ70UQ0 350 aa10.33□□□□□ -0.76
APTX-230ENST00000494649 WDR53Q7Z5U6 358 aaPredicted RBP10.33□□□□□ -0.76
APTX-230ENST00000494649 OR52R1Q8NGF1 315 aa10.33□□□□□ -0.76
APTX-230ENST00000494649 FBXL20Q96IG2 436 aa10.33□□□□□ -0.76
APTX-230ENST00000494649 METTL2AQ96IZ6 378 aaKnown RBP10.33□□□□□ -0.76
APTX-230ENST00000494649 TEX37Q96LM6 180 aa10.33□□□□□ -0.76
APTX-230ENST00000494649 HES7Q9BYE0 225 aa10.33□□□□□ -0.76
APTX-230ENST00000494649 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.33□□□□□ -0.76
APTX-230ENST00000494649 GLIPR2Q9H4G4 154 aa10.33□□□□□ -0.76
APTX-230ENST00000494649 KLHL1Q9NR64 748 aa10.33□□□□□ -0.76
APTX-230ENST00000494649 TEKT2Q9UIF3 430 aa10.33□□□□□ -0.76
APTX-230ENST00000494649 DYTNA2CJ06 578 aa10.32□□□□□ -0.76
APTX-230ENST00000494649 SCAMP2O15127 329 aaKnown RBP10.32□□□□□ -0.76
APTX-230ENST00000494649 PDPK1O15530 556 aa10.32□□□□□ -0.76
APTX-230ENST00000494649 ZFAND5O76080 213 aa10.32□□□□□ -0.76
APTX-230ENST00000494649 ABCB1P08183 1280 aaPredicted RBP10.32□□□□□ -0.76
APTX-230ENST00000494649 NTSP30990 170 aa10.32□□□□□ -0.76
APTX-230ENST00000494649 HPCAL1P37235 193 aa10.32□□□□□ -0.76
APTX-230ENST00000494649 SLC37A1P57057 533 aa10.32□□□□□ -0.76
APTX-230ENST00000494649 MGAT2Q10469 447 aa10.32□□□□□ -0.76
APTX-230ENST00000494649 MEP1AQ16819 746 aa10.32□□□□□ -0.76
APTX-230ENST00000494649 LSM12Q3MHD2 195 aaKnown RBP10.32□□□□□ -0.76
APTX-230ENST00000494649 SLC6A19Q695T7 634 aa10.32□□□□□ -0.76
APTX-230ENST00000494649 JMJD6Q6NYC1 403 aaPredicted RBP10.32□□□□□ -0.76
APTX-230ENST00000494649 PRICKLE2Q7Z3G6 844 aa10.32□□□□□ -0.76
APTX-230ENST00000494649 PRR22Q8IZ63 422 aa10.32□□□□□ -0.76
APTX-230ENST00000494649 ZNF843Q8N446 348 aa10.32□□□□□ -0.76
APTX-230ENST00000494649 ZADH2Q8N4Q0 377 aa10.32□□□□□ -0.76
APTX-230ENST00000494649 ARFGAP2Q8N6H7 521 aa10.32□□□□□ -0.76
APTX-230ENST00000494649 OR7G2Q8NG99 324 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms