RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 HRGP04196 525 aa18.29■□□□□ 0.52
COL27A1-207ENST00000494090 E2F1Q01094 437 aa18.29■□□□□ 0.52
COL27A1-207ENST00000494090 MS4A2Q01362 244 aa18.29■□□□□ 0.52
COL27A1-207ENST00000494090 UBE2Q1Q7Z7E8 422 aa18.29■□□□□ 0.52
COL27A1-207ENST00000494090 SAMD12Q8N8I0 201 aa18.29■□□□□ 0.52
COL27A1-207ENST00000494090 DPH7Q9BTV6 452 aa18.29■□□□□ 0.52
COL27A1-207ENST00000494090 HSPB11Q9Y547 144 aa18.29■□□□□ 0.52
COL27A1-207ENST00000494090 SLC33A1O00400 549 aaPredicted RBP18.29■□□□□ 0.52
COL27A1-207ENST00000494090 KIAA0513O60268 411 aa18.29■□□□□ 0.52
COL27A1-207ENST00000494090 OR2B3O76000 313 aa18.29■□□□□ 0.52
COL27A1-207ENST00000494090 CAPN3P20807 821 aa18.29■□□□□ 0.52
COL27A1-207ENST00000494090 RPS3P23396 243 aaKnown RBP eCLIP18.29■□□□□ 0.52
COL27A1-207ENST00000494090 CST6Q15828 149 aa18.29■□□□□ 0.52
COL27A1-207ENST00000494090 TCTE1Q5JU00 501 aa18.29■□□□□ 0.52
COL27A1-207ENST00000494090 CES4AQ5XG92 561 aa18.29■□□□□ 0.52
COL27A1-207ENST00000494090 ARFGAP1Q8N6T3 406 aa18.29■□□□□ 0.52
COL27A1-207ENST00000494090 FBXO27Q8NI29 283 aa18.29■□□□□ 0.52
COL27A1-207ENST00000494090 THAP4Q8WY91 577 aa18.29■□□□□ 0.52
COL27A1-207ENST00000494090 MROQ9BYG7 248 aa18.29■□□□□ 0.52
COL27A1-207ENST00000494090 SLC35F4A4IF30 521 aa18.28■□□□□ 0.52
COL27A1-207ENST00000494090 SPARCP09486 303 aa18.28■□□□□ 0.52
COL27A1-207ENST00000494090 ZNF865P0CJ78 1059 aaPredicted RBP18.28■□□□□ 0.52
COL27A1-207ENST00000494090 EIF2S3P41091 472 aaKnown RBP18.28■□□□□ 0.52
COL27A1-207ENST00000494090 PSMA6P60900 246 aaKnown RBP18.28■□□□□ 0.52
COL27A1-207ENST00000494090 TBRG1Q3YBR2 411 aa18.28■□□□□ 0.52
COL27A1-207ENST00000494090 C1orf189Q5VU69 101 aa18.28■□□□□ 0.52
COL27A1-207ENST00000494090 BAIAP2L2Q6UXY1 529 aa18.28■□□□□ 0.52
COL27A1-207ENST00000494090 MRPL10Q7Z7H8 261 aaKnown RBP18.28■□□□□ 0.52
COL27A1-207ENST00000494090 TIGD4Q8IY51 512 aa18.28■□□□□ 0.52
COL27A1-207ENST00000494090 TMEM40Q8WWA1 233 aa18.28■□□□□ 0.52
COL27A1-207ENST00000494090 SPEF1Q9Y4P9 236 aa18.28■□□□□ 0.52
COL27A1-207ENST00000494090 LCN1P31025 176 aa18.28■□□□□ 0.52
COL27A1-207ENST00000494090 C3orf33Q6P1S2 294 aa18.28■□□□□ 0.52
COL27A1-207ENST00000494090 ELP5Q8TE02 316 aa18.28■□□□□ 0.52
COL27A1-207ENST00000494090 KCNK13Q9HB14 408 aa18.28■□□□□ 0.52
COL27A1-207ENST00000494090 MLXQ9UH92 298 aa18.28■□□□□ 0.52
COL27A1-207ENST00000494090 SARDHQ9UL12 918 aa18.28■□□□□ 0.52
COL27A1-207ENST00000494090 RARRES3Q9UL19 164 aa18.28■□□□□ 0.52
COL27A1-207ENST00000494090 ZNF860A6NHJ4 632 aa18.28■□□□□ 0.52
COL27A1-207ENST00000494090 RAD51DO75771 328 aa18.28■□□□□ 0.52
COL27A1-207ENST00000494090 SPINT3P49223 89 aa18.28■□□□□ 0.52
COL27A1-207ENST00000494090 GAS6Q14393 721 aa18.28■□□□□ 0.52
COL27A1-207ENST00000494090 FTMTQ8N4E7 242 aa18.28■□□□□ 0.52
COL27A1-207ENST00000494090 IL22RA1Q8N6P7 574 aa18.28■□□□□ 0.52
COL27A1-207ENST00000494090 OR56A3Q8NH54 315 aa18.28■□□□□ 0.52
COL27A1-207ENST00000494090 ONECUT3O60422 494 aaPredicted RBP18.28■□□□□ 0.52
COL27A1-207ENST00000494090 PORP16435 677 aaPredicted RBP18.28■□□□□ 0.52
COL27A1-207ENST00000494090 BMPR1AP36894 532 aa18.28■□□□□ 0.52
COL27A1-207ENST00000494090 RPA4Q13156 261 aa18.28■□□□□ 0.52
COL27A1-207ENST00000494090 GRM7Q14831 915 aa18.28■□□□□ 0.52
COL27A1-207ENST00000494090 DEFB134Q4QY38 66 aa18.28■□□□□ 0.52
COL27A1-207ENST00000494090 GRHL2Q6ISB3 625 aa18.28■□□□□ 0.52
COL27A1-207ENST00000494090 LRRN1Q6UXK5 716 aa18.28■□□□□ 0.52
COL27A1-207ENST00000494090 FIBINQ8TAL6 211 aa18.28■□□□□ 0.52
COL27A1-207ENST00000494090 F2RL3Q96RI0 385 aa18.28■□□□□ 0.52
COL27A1-207ENST00000494090 SECISBP2Q96T21 854 aaKnown RBP18.28■□□□□ 0.52
COL27A1-207ENST00000494090 CDCA3Q99618 268 aaPredicted RBP18.28■□□□□ 0.52
COL27A1-207ENST00000494090 WDR77Q9BQA1 342 aaPredicted RBP18.28■□□□□ 0.52
COL27A1-207ENST00000494090 ZNF471Q9BX82 626 aaPredicted RBP18.28■□□□□ 0.52
COL27A1-207ENST00000494090 STUB1Q9UNE7 303 aa18.28■□□□□ 0.52
COL27A1-207ENST00000494090 CCDC88AQ3V6T2 1871 aa18.27■□□□□ 0.52
COL27A1-207ENST00000494090 SH3D21A4FU49 640 aa18.27■□□□□ 0.52
COL27A1-207ENST00000494090 K7ERQ8 282 aa18.27■□□□□ 0.52
COL27A1-207ENST00000494090 PET100P0DJ07 73 aa18.27■□□□□ 0.52
COL27A1-207ENST00000494090 C6P13671 934 aa18.27■□□□□ 0.52
COL27A1-207ENST00000494090 HTR6P50406 440 aa18.27■□□□□ 0.52
COL27A1-207ENST00000494090 S100A10P60903 97 aa18.27■□□□□ 0.52
COL27A1-207ENST00000494090 HSD11B2P80365 405 aa18.27■□□□□ 0.52
COL27A1-207ENST00000494090 CGB2Q6NT52 195 aa18.27■□□□□ 0.52
COL27A1-207ENST00000494090 ZC3H14Q6PJT7 736 aaKnown RBP18.27■□□□□ 0.52
COL27A1-207ENST00000494090 SPATC1Q76KD6 591 aa18.27■□□□□ 0.52
COL27A1-207ENST00000494090 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.27■□□□□ 0.52
COL27A1-207ENST00000494090 TMEM174Q8WUU8 243 aa18.27■□□□□ 0.52
COL27A1-207ENST00000494090 FCAMRQ8WWV6 532 aa18.27■□□□□ 0.52
COL27A1-207ENST00000494090 BCL7BQ9BQE9 202 aa18.27■□□□□ 0.52
COL27A1-207ENST00000494090 SLC12A9Q9BXP2 914 aa18.27■□□□□ 0.52
COL27A1-207ENST00000494090 SLC5A7Q9GZV3 580 aa18.27■□□□□ 0.52
COL27A1-207ENST00000494090 MYNNQ9NPC7 610 aa18.27■□□□□ 0.52
COL27A1-207ENST00000494090 ZSCAN5BA6NJL1 495 aa18.27■□□□□ 0.52
COL27A1-207ENST00000494090 SCGB1D2O95969 90 aa18.27■□□□□ 0.52
COL27A1-207ENST00000494090 RETP07949 1114 aa18.27■□□□□ 0.52
COL27A1-207ENST00000494090 RTP2Q5QGT7 225 aa18.27■□□□□ 0.52
COL27A1-207ENST00000494090 OR52N2Q8NGI0 321 aa18.27■□□□□ 0.52
COL27A1-207ENST00000494090 HOXD1Q9GZZ0 328 aa18.27■□□□□ 0.52
COL27A1-207ENST00000494090 KATNBL1Q9H079 304 aa18.27■□□□□ 0.52
COL27A1-207ENST00000494090 OR10A4Q9H209 315 aa18.27■□□□□ 0.52
COL27A1-207ENST00000494090 NAV1Q8NEY1 1877 aa18.27■□□□□ 0.52
COL27A1-207ENST00000494090 SYPP08247 313 aa18.27■□□□□ 0.52
COL27A1-207ENST00000494090 PTGS2P35354 604 aa18.27■□□□□ 0.52
COL27A1-207ENST00000494090 CTBP2P56545 445 aa18.27■□□□□ 0.52
COL27A1-207ENST00000494090 RPS15P62841 145 aaKnown RBP18.27■□□□□ 0.52
COL27A1-207ENST00000494090 DEFA5Q01523 94 aa18.27■□□□□ 0.52
COL27A1-207ENST00000494090 C18orf21Q32NC0 220 aaPredicted RBP18.27■□□□□ 0.52
COL27A1-207ENST00000494090 C1orf94Q6P1W5 598 aa18.27■□□□□ 0.52
COL27A1-207ENST00000494090 PRSS48Q7RTY5 328 aa18.27■□□□□ 0.52
COL27A1-207ENST00000494090 APCDD1Q8J025 514 aa18.27■□□□□ 0.52
COL27A1-207ENST00000494090 PTERQ96BW5 349 aa18.27■□□□□ 0.52
COL27A1-207ENST00000494090 SGTBQ96EQ0 304 aa18.27■□□□□ 0.52
COL27A1-207ENST00000494090 TGM7Q96PF1 710 aa18.27■□□□□ 0.52
COL27A1-207ENST00000494090 ZNF700Q9H0M5 742 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms