RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 PCBP4P57723 403 aaKnown RBP10.9□□□□□ -0.67
RFC4-214ENST00000494047 ABATP80404 500 aa10.9□□□□□ -0.67
RFC4-214ENST00000494047 IFITM3Q01628 133 aa10.9□□□□□ -0.67
RFC4-214ENST00000494047 DNASE1L3Q13609 305 aa10.9□□□□□ -0.67
RFC4-214ENST00000494047 MAPK11Q15759 364 aa10.9□□□□□ -0.67
RFC4-214ENST00000494047 TSTQ16762 297 aaKnown RBP10.9□□□□□ -0.67
RFC4-214ENST00000494047 INAVAQ3KP66 663 aa10.9□□□□□ -0.67
RFC4-214ENST00000494047 TMEM31Q5JXX7 168 aa10.9□□□□□ -0.67
RFC4-214ENST00000494047 COX20Q5RI15 118 aa10.9□□□□□ -0.67
RFC4-214ENST00000494047 CATSPEREQ5SY80 951 aa10.9□□□□□ -0.67
RFC4-214ENST00000494047 RFLNAQ6ZTI6 216 aa10.9□□□□□ -0.67
RFC4-214ENST00000494047 GALNT10Q86SR1 603 aa10.9□□□□□ -0.67
RFC4-214ENST00000494047 ZBTB46Q86UZ6 589 aa10.9□□□□□ -0.67
RFC4-214ENST00000494047 LRRTM4Q86VH4 590 aa10.9□□□□□ -0.67
RFC4-214ENST00000494047 AMZ2Q86W34 360 aa10.9□□□□□ -0.67
RFC4-214ENST00000494047 ATCAYQ86WG3 371 aa10.9□□□□□ -0.67
RFC4-214ENST00000494047 HEATR4Q86WZ0 1026 aa10.9□□□□□ -0.67
RFC4-214ENST00000494047 OR9Q2Q8NGE9 314 aa10.9□□□□□ -0.67
RFC4-214ENST00000494047 SMG7Q92540 1137 aaKnown RBP10.9□□□□□ -0.67
RFC4-214ENST00000494047 TMEM19Q96HH6 336 aa10.9□□□□□ -0.67
RFC4-214ENST00000494047 SLC35G5Q96KT7 338 aa10.9□□□□□ -0.67
RFC4-214ENST00000494047 PRRC1Q96M27 445 aa10.9□□□□□ -0.67
RFC4-214ENST00000494047 OR52A5Q9H2C5 316 aa10.9□□□□□ -0.67
RFC4-214ENST00000494047 ARMC7Q9H6L4 198 aa10.9□□□□□ -0.67
RFC4-214ENST00000494047 RMI1Q9H9A7 625 aa10.9□□□□□ -0.67
RFC4-214ENST00000494047 GIMAP4Q9NUV9 329 aa10.9□□□□□ -0.67
RFC4-214ENST00000494047 TAAR2Q9P1P5 351 aa10.9□□□□□ -0.67
RFC4-214ENST00000494047 KLF15Q9UIH9 416 aa10.9□□□□□ -0.67
RFC4-214ENST00000494047 ZNF221Q9UK13 617 aa10.9□□□□□ -0.67
RFC4-214ENST00000494047 SLC13A4Q9UKG4 626 aa10.9□□□□□ -0.67
RFC4-214ENST00000494047 HCN2Q9UL51 889 aa10.9□□□□□ -0.67
RFC4-214ENST00000494047 LIPT1Q9Y234 373 aa10.9□□□□□ -0.67
RFC4-214ENST00000494047 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.9□□□□□ -0.67
RFC4-214ENST00000494047 CFAP20Q9Y6A4 193 aaKnown RBP10.9□□□□□ -0.67
RFC4-214ENST00000494047 PRAMEF33A0A0G2JMD5 474 aa10.89□□□□□ -0.67
RFC4-214ENST00000494047 TMEM202A6NGA9 273 aa10.89□□□□□ -0.67
RFC4-214ENST00000494047 TTC36A6NLP5 189 aa10.89□□□□□ -0.67
RFC4-214ENST00000494047 H3BN98 237 aa10.89□□□□□ -0.67
RFC4-214ENST00000494047 ARHGAP33O14559 1287 aa10.89□□□□□ -0.67
RFC4-214ENST00000494047 SLC30A4O14863 429 aa10.89□□□□□ -0.67
RFC4-214ENST00000494047 PRAMEF10O60809 474 aa10.89□□□□□ -0.67
RFC4-214ENST00000494047 NME6O75414 186 aaPredicted RBP10.89□□□□□ -0.67
RFC4-214ENST00000494047 TGFB1P01137 390 aa10.89□□□□□ -0.67
RFC4-214ENST00000494047 BCHEP06276 602 aa10.89□□□□□ -0.67
RFC4-214ENST00000494047 HSMCR30P0CW71 290 aa10.89□□□□□ -0.67
RFC4-214ENST00000494047 FSHRP23945 695 aa10.89□□□□□ -0.67
RFC4-214ENST00000494047 CNR2P34972 360 aa10.89□□□□□ -0.67
RFC4-214ENST00000494047 PRR5P85299 388 aa10.89□□□□□ -0.67
RFC4-214ENST00000494047 DMPKQ09013 629 aa10.89□□□□□ -0.67
RFC4-214ENST00000494047 AGERQ15109 404 aa10.89□□□□□ -0.67
RFC4-214ENST00000494047 SEC23BQ15437 767 aa10.89□□□□□ -0.67
RFC4-214ENST00000494047 HNRNPA1L2Q32P51 320 aaKnown RBP10.89□□□□□ -0.67
RFC4-214ENST00000494047 ARMC4Q5T2S8 1044 aa10.89□□□□□ -0.67
RFC4-214ENST00000494047 DDI2Q5TDH0 399 aa10.89□□□□□ -0.67
RFC4-214ENST00000494047 ASTLQ6HA08 431 aaPredicted RBP10.89□□□□□ -0.67
RFC4-214ENST00000494047 XKRXQ6PP77 449 aa10.89□□□□□ -0.67
RFC4-214ENST00000494047 CCBE1Q6UXH8 406 aaPredicted RBP10.89□□□□□ -0.67
RFC4-214ENST00000494047 NANOGP1Q8N7R0 232 aa10.89□□□□□ -0.67
RFC4-214ENST00000494047 FAM181AQ8N9Y4 354 aa10.89□□□□□ -0.67
RFC4-214ENST00000494047 OR52J3Q8NH60 311 aa10.89□□□□□ -0.67
RFC4-214ENST00000494047 SLC38A5Q8WUX1 472 aa10.89□□□□□ -0.67
RFC4-214ENST00000494047 EDAQ92838 391 aa10.89□□□□□ -0.67
RFC4-214ENST00000494047 NXPE3Q969Y0 559 aa10.89□□□□□ -0.67
RFC4-214ENST00000494047 GTPBP3Q969Y2 492 aaKnown RBP10.89□□□□□ -0.67
RFC4-214ENST00000494047 CHFRQ96EP1 664 aa10.89□□□□□ -0.67
RFC4-214ENST00000494047 FNDC11Q9BVV2 318 aa10.89□□□□□ -0.67
RFC4-214ENST00000494047 PINK1Q9BXM7 581 aa10.89□□□□□ -0.67
RFC4-214ENST00000494047 ASPNQ9BXN1 380 aa10.89□□□□□ -0.67
RFC4-214ENST00000494047 HDAC8Q9BY41 377 aa10.89□□□□□ -0.67
RFC4-214ENST00000494047 SLC22A4Q9H015 551 aa10.89□□□□□ -0.67
RFC4-214ENST00000494047 OR2AG1Q9H205 316 aa10.89□□□□□ -0.67
RFC4-214ENST00000494047 OR51B5Q9H339 312 aa10.89□□□□□ -0.67
RFC4-214ENST00000494047 DDX31Q9H8H2 851 aaKnown RBP10.89□□□□□ -0.67
RFC4-214ENST00000494047 KLHL28Q9NXS3 571 aa10.89□□□□□ -0.67
RFC4-214ENST00000494047 LSM2Q9Y333 95 aaKnown RBP10.89□□□□□ -0.67
RFC4-214ENST00000494047 ASB4Q9Y574 426 aa10.89□□□□□ -0.67
RFC4-214ENST00000494047 SNX8Q9Y5X2 465 aa10.89□□□□□ -0.67
RFC4-214ENST00000494047 C5orf42Q9H799 3197 aa10.88□□□□□ -0.67
RFC4-214ENST00000494047 PRR33A8MZF0 331 aa10.88□□□□□ -0.67
RFC4-214ENST00000494047 PCDH17O14917 1159 aa10.88□□□□□ -0.67
RFC4-214ENST00000494047 KMOO15229 486 aa10.88□□□□□ -0.67
RFC4-214ENST00000494047 NDUFS4O43181 175 aa10.88□□□□□ -0.67
RFC4-214ENST00000494047 PRODHO43272 600 aa10.88□□□□□ -0.67
RFC4-214ENST00000494047 HCN1O60741 890 aa10.88□□□□□ -0.67
RFC4-214ENST00000494047 POP7O75817 140 aaKnown RBP10.88□□□□□ -0.67
RFC4-214ENST00000494047 SOX30O94993 753 aa10.88□□□□□ -0.67
RFC4-214ENST00000494047 GASTP01350 101 aa10.88□□□□□ -0.67
RFC4-214ENST00000494047 CTSLP07711 333 aa10.88□□□□□ -0.67
RFC4-214ENST00000494047 RHOP08100 348 aa10.88□□□□□ -0.67
RFC4-214ENST00000494047 SLC35G4P0C7Q5 338 aa10.88□□□□□ -0.67
RFC4-214ENST00000494047 CKMT1AP12532 417 aa10.88□□□□□ -0.67
RFC4-214ENST00000494047 C6P13671 934 aa10.88□□□□□ -0.67
RFC4-214ENST00000494047 ADRB3P13945 408 aa10.88□□□□□ -0.67
RFC4-214ENST00000494047 CPEP16870 476 aa10.88□□□□□ -0.67
RFC4-214ENST00000494047 PBLDP30039 288 aaPredicted RBP10.88□□□□□ -0.67
RFC4-214ENST00000494047 HOXD12P35452 270 aa10.88□□□□□ -0.67
RFC4-214ENST00000494047 OR1E2P47887 323 aa10.88□□□□□ -0.67
RFC4-214ENST00000494047 SLC9A3P48764 834 aa10.88□□□□□ -0.67
RFC4-214ENST00000494047 NUDT6P53370 316 aa10.88□□□□□ -0.67
RFC4-214ENST00000494047 PPP3R1P63098 170 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms