RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 BSGP35613 385 aa9.43□□□□□ -0.9
NUDCD3-210ENST00000493613 ARL1P40616 181 aaPredicted RBP9.43□□□□□ -0.9
NUDCD3-210ENST00000493613 KIR2DL3P43628 341 aa9.43□□□□□ -0.9
NUDCD3-210ENST00000493613 NEK2P51955 445 aa9.43□□□□□ -0.9
NUDCD3-210ENST00000493613 ALDH18A1P54886 795 aaKnown RBP9.43□□□□□ -0.9
NUDCD3-210ENST00000493613 NAB1Q13506 487 aa9.43□□□□□ -0.9
NUDCD3-210ENST00000493613 CUL3Q13618 768 aa9.43□□□□□ -0.9
NUDCD3-210ENST00000493613 SNTB1Q13884 538 aaKnown RBP9.43□□□□□ -0.9
NUDCD3-210ENST00000493613 SETDB1Q15047 1291 aa9.43□□□□□ -0.9
NUDCD3-210ENST00000493613 HSPB2Q16082 182 aa9.43□□□□□ -0.9
NUDCD3-210ENST00000493613 UAP1Q16222 522 aaPredicted RBP9.43□□□□□ -0.9
NUDCD3-210ENST00000493613 NTRK2Q16620 822 aa9.43□□□□□ -0.9
NUDCD3-210ENST00000493613 CPSF6Q16630 551 aaKnown RBP eCLIP9.43□□□□□ -0.9
NUDCD3-210ENST00000493613 TBCELQ5QJ74 424 aa9.43□□□□□ -0.9
NUDCD3-210ENST00000493613 TMEM198Q66K66 360 aa9.43□□□□□ -0.9
NUDCD3-210ENST00000493613 MRM1Q6IN84 353 aaKnown RBP9.43□□□□□ -0.9
NUDCD3-210ENST00000493613 NUDT13Q86X67 352 aa9.43□□□□□ -0.9
NUDCD3-210ENST00000493613 CENPLQ8N0S6 344 aaPredicted RBP9.43□□□□□ -0.9
NUDCD3-210ENST00000493613 TAGAPQ8N103 731 aa9.43□□□□□ -0.9
NUDCD3-210ENST00000493613 RHEBL1Q8TAI7 183 aa9.43□□□□□ -0.9
NUDCD3-210ENST00000493613 DIO2Q92813 273 aa9.43□□□□□ -0.9
NUDCD3-210ENST00000493613 REPS1Q96D71 796 aa9.43□□□□□ -0.9
NUDCD3-210ENST00000493613 GPATCH1Q9BRR8 931 aaKnown RBP9.43□□□□□ -0.9
NUDCD3-210ENST00000493613 DDX31Q9H8H2 851 aaKnown RBP9.43□□□□□ -0.9
NUDCD3-210ENST00000493613 WDR41Q9HAD4 459 aa9.43□□□□□ -0.9
NUDCD3-210ENST00000493613 SNX15Q9NRS6 342 aa9.43□□□□□ -0.9
NUDCD3-210ENST00000493613 RYDENQ9NUL5 291 aaKnown RBP9.43□□□□□ -0.9
NUDCD3-210ENST00000493613 CNOT11Q9UKZ1 510 aaKnown RBP9.43□□□□□ -0.9
NUDCD3-210ENST00000493613 ASB4Q9Y574 426 aa9.43□□□□□ -0.9
NUDCD3-210ENST00000493613 MED12LQ86YW9 2145 aa9.43□□□□□ -0.9
NUDCD3-210ENST00000493613 A0A096LPK6 155 aa9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 ESYT3A0FGR9 886 aa9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 HMX2A2RU54 273 aa9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 ANKRD33BA6NCL7 494 aa9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 CAPN14A8MX76 684 aa9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 DVL2O14641 736 aa9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 TP53I11O14683 189 aa9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 UGDHO60701 494 aa9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 TRIM3O75382 744 aaPredicted RBP9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 KRT38O76015 456 aa9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 SIX3O95343 332 aaPredicted RBP9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 AIFM1O95831 613 aa9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 GBAP04062 536 aa9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 CLPSP04118 112 aa9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 SLC35E2P0CK97 266 aa9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 CD99P14209 185 aa9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 BMP5P22003 454 aa9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 SSTR4P31391 388 aa9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 GALNSP34059 522 aa9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 PEX19P40855 299 aa9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 PIK3CGP48736 1102 aa9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 TMED10P49755 219 aaKnown RBP9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 SLC7A5Q01650 507 aa9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 GUCY2DQ02846 1103 aa9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 DUSP8Q13202 625 aa9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 GTF2H2Q13888 395 aa9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 ACAP2Q15057 778 aa9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 RPS6KA2Q15349 733 aa9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 HLA-DQA1Q5Y7H0 255 aa9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 OR52E8Q6IFG1 317 aa9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 GTF2H2CQ6P1K8 395 aa9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 KLC3Q6P597 504 aa9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 SYT10Q6XYQ8 523 aa9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 TMEM64Q6YI46 380 aa9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 SEM1Q6ZVN7 128 aa9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 GOLGA7Q7Z5G4 137 aa9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 CCDC91Q7Z6B0 441 aa9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 C17orf53Q8N3J3 647 aaPredicted RBP9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 RELL2Q8NC24 303 aaPredicted RBP9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 NAXEQ8NCW5 288 aa9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 TNIP2Q8NFZ5 429 aa9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 NINJ1Q92982 152 aa9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 UCN3Q969E3 161 aa9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 TP53INP1Q96A56 240 aa9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 LRRC46Q96FV0 321 aa9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 RMND5BQ96G75 393 aaPredicted RBP9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 RILPQ96NA2 401 aa9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 CDK15Q96Q40 435 aa9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 FOXC2Q99958 501 aa9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 SH3GL2Q99962 352 aa9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 CLEC4MQ9H2X3 399 aaPredicted RBP9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 LIME1Q9H400 295 aa9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 IPPKQ9H8X2 491 aa9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 CCM2LQ9NUG4 571 aaPredicted RBP9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 ZNF358Q9NW07 568 aa9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 CRIM1Q9NZV1 1036 aa9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 CPSF2Q9P2I0 782 aaKnown RBP9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 ST6GALNAC2Q9UJ37 374 aa9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 RNF11Q9Y3C5 154 aa9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 AKAP6Q13023 2319 aa9.42□□□□□ -0.9
NUDCD3-210ENST00000493613 A0A1W2PS29 197 aa9.41□□□□□ -0.9
NUDCD3-210ENST00000493613 CCDC189A1A4V9 331 aa9.41□□□□□ -0.9
NUDCD3-210ENST00000493613 FAM221AA4D161 298 aa9.41□□□□□ -0.9
NUDCD3-210ENST00000493613 AHRRA9YTQ3 701 aa9.41□□□□□ -0.9
NUDCD3-210ENST00000493613 ESPNB1AK53 854 aa9.41□□□□□ -0.9
NUDCD3-210ENST00000493613 KDM4EB2RXH2 506 aaPredicted RBP9.41□□□□□ -0.9
NUDCD3-210ENST00000493613 SYT5O00445 386 aa9.41□□□□□ -0.9
NUDCD3-210ENST00000493613 PGRMC2O15173 223 aa9.41□□□□□ -0.9
NUDCD3-210ENST00000493613 TRAPPC6AO75865 159 aa9.41□□□□□ -0.9
NUDCD3-210ENST00000493613 KLHL2O95198 593 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms