RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 C12orf73Q69YU5 71 aa11.11□□□□□ -0.63
HDAC4-210ENST00000493582 OR2T4Q8NH00 348 aa11.11□□□□□ -0.63
HDAC4-210ENST00000493582 OTULINQ96BN8 352 aa11.11□□□□□ -0.63
HDAC4-210ENST00000493582 MYO19Q96H55 970 aa11.11□□□□□ -0.63
HDAC4-210ENST00000493582 C12orf66Q96MD2 445 aa11.11□□□□□ -0.63
HDAC4-210ENST00000493582 UQCC2Q9BRT2 126 aa11.11□□□□□ -0.63
HDAC4-210ENST00000493582 SLC35A5Q9BS91 424 aa11.11□□□□□ -0.63
HDAC4-210ENST00000493582 TESQ9UGI8 421 aaKnown RBP11.11□□□□□ -0.63
HDAC4-210ENST00000493582 GMEB2Q9UKD1 530 aa11.11□□□□□ -0.63
HDAC4-210ENST00000493582 CORO2BQ9UQ03 480 aa11.11□□□□□ -0.63
HDAC4-210ENST00000493582 ZNF175Q9Y473 711 aa11.11□□□□□ -0.63
HDAC4-210ENST00000493582 MFSD2BA6NFX1 497 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 SEMA7AO75326 666 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 TCRBP04435 133 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 IFNW1P05000 195 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 POU3F2P20265 443 aaPredicted RBP11.1□□□□□ -0.63
HDAC4-210ENST00000493582 GIFP27352 417 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 GABRA5P31644 462 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 ACLYP53396 1101 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 PURAQ00577 322 aaKnown RBP11.1□□□□□ -0.63
HDAC4-210ENST00000493582 ST3GAL2Q16842 350 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 C17orf107Q6ZR85 190 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 RBFAQ8N0V3 343 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 GPR156Q8NFN8 814 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 ZNF416Q9BWM5 594 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 ZNF304Q9HCX3 659 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 MARCH2Q9P0N8 246 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 COPS3Q9UNS2 423 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 MRPS7Q9Y2R9 242 aaKnown RBP11.1□□□□□ -0.63
HDAC4-210ENST00000493582 CACNG2Q9Y698 323 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 LINC01387J3KSC0 135 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 SSNA1O43805 119 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 B4GALT3O60512 393 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 ETHE1O95571 254 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 PLATP00750 562 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 GBAP04062 536 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 ANXA4P09525 319 aaPredicted RBP11.1□□□□□ -0.63
HDAC4-210ENST00000493582 CELP19835 753 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 IDSP22304 550 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 PPIBP23284 216 aaKnown RBP11.1□□□□□ -0.63
HDAC4-210ENST00000493582 AOAHP28039 575 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 FGF9P31371 208 aaPredicted RBP11.1□□□□□ -0.63
HDAC4-210ENST00000493582 CCR6P51684 374 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 ZSWIM7Q19AV6 140 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 CRB2Q5IJ48 1285 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 RNLSQ5VYX0 342 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 MZT2AQ6P582 158 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 RAET1EQ8TD07 263 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 HGDQ93099 445 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 BRD7Q9NPI1 651 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 BAIAP2Q9UQB8 552 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 GPR52Q9Y2T5 361 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 PRKAB1Q9Y478 270 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 PTPRDP23468 1912 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 PRMT3O60678 531 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 MMP20O60882 483 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 C6orf47O95873 294 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 ADAP00813 363 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 F11P03951 625 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 CD22P20273 847 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 RPS24P62847 133 aaKnown RBP11.1□□□□□ -0.63
HDAC4-210ENST00000493582 LSM11P83369 360 aaKnown RBP eCLIP11.1□□□□□ -0.63
HDAC4-210ENST00000493582 OCLNQ16625 522 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 ATP13A5Q4VNC0 1218 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 ZNF385BQ569K4 471 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 ACSM5Q6NUN0 579 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 ATRAIDQ6UW56 229 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 CERS6Q6ZMG9 384 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 UBE2R2Q712K3 238 aaPredicted RBP11.1□□□□□ -0.63
HDAC4-210ENST00000493582 NR2C2APQ86WQ0 139 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 RBM45Q8IUH3 476 aaKnown RBP11.1□□□□□ -0.63
HDAC4-210ENST00000493582 GPR135Q8IZ08 494 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 SLAIN1Q8ND83 568 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 ZNF582Q96NG8 517 aaPredicted RBP11.1□□□□□ -0.63
HDAC4-210ENST00000493582 METTL17Q9H7H0 456 aaPredicted RBP11.1□□□□□ -0.63
HDAC4-210ENST00000493582 ELP3Q9H9T3 547 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 RDH14Q9HBH5 336 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 PCDHB16Q9NRJ7 776 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 C1GALT1Q9NS00 363 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 ZSCAN32Q9NX65 697 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 TAS2R7Q9NYW3 318 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 BTNL2Q9UIR0 455 aa11.1□□□□□ -0.63
HDAC4-210ENST00000493582 TRIP12Q14669 1992 aaPredicted RBP11.09□□□□□ -0.63
HDAC4-210ENST00000493582 PLXNA4Q9HCM2 1894 aa11.09□□□□□ -0.63
HDAC4-210ENST00000493582 GLYATL1P3A0A0U1RQE8 302 aa11.09□□□□□ -0.63
HDAC4-210ENST00000493582 GNG14A0A1W2PPG7 69 aa11.09□□□□□ -0.63
HDAC4-210ENST00000493582 ZNF98A6NK75 572 aa11.09□□□□□ -0.63
HDAC4-210ENST00000493582 GAPDHSO14556 408 aaPredicted RBP11.09□□□□□ -0.63
HDAC4-210ENST00000493582 SNAI1O95863 264 aaPredicted RBP11.09□□□□□ -0.63
HDAC4-210ENST00000493582 ITGALP20701 1170 aa11.09□□□□□ -0.63
HDAC4-210ENST00000493582 TACR2P21452 398 aa11.09□□□□□ -0.63
HDAC4-210ENST00000493582 AHCYP23526 432 aa11.09□□□□□ -0.63
HDAC4-210ENST00000493582 MAPKAPK2P49137 400 aa11.09□□□□□ -0.63
HDAC4-210ENST00000493582 SELENOPP49908 381 aa11.09□□□□□ -0.63
HDAC4-210ENST00000493582 COX10Q12887 443 aa11.09□□□□□ -0.63
HDAC4-210ENST00000493582 SLC5A12Q1EHB4 618 aa11.09□□□□□ -0.63
HDAC4-210ENST00000493582 LYPD4Q6UWN0 246 aa11.09□□□□□ -0.63
HDAC4-210ENST00000493582 ZNF687Q8N1G0 1237 aa11.09□□□□□ -0.63
HDAC4-210ENST00000493582 L3MBTL4Q8NA19 623 aa11.09□□□□□ -0.63
HDAC4-210ENST00000493582 SFXN2Q96NB2 322 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms