RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 LATO43561 262 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 MFSD11O43934 449 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 STX10O60499 249 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 HSF2BPO75031 334 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 WISP2O76076 250 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 NKX2-2O95096 273 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 BMP10O95393 424 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 MLYCDO95822 493 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 SLC4A1P02730 911 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 DNTTP04053 509 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 SERPINF2P08697 491 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 FAM157CP0CG43 387 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 ACADMP11310 421 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 GATA1P15976 413 aaPredicted RBP2.77□□□□□ -1.97
PTCD3-218ENST00000493430 GOT1P17174 413 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 EPHA8P29322 1005 aaPredicted RBP2.77□□□□□ -1.97
PTCD3-218ENST00000493430 HOXA6P31267 233 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 CDH5P33151 784 aaPredicted RBP2.77□□□□□ -1.97
PTCD3-218ENST00000493430 CA5AP35218 305 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 ANP32AP39687 249 aaKnown RBP2.77□□□□□ -1.97
PTCD3-218ENST00000493430 MATKP42679 507 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 MAPK9P45984 424 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 MARCKSL1P49006 195 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 CCNHP51946 323 aaPredicted RBP2.77□□□□□ -1.97
PTCD3-218ENST00000493430 CTSCP53634 463 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 LIMK1P53667 647 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 ATXN3P54252 364 aaPredicted RBP2.77□□□□□ -1.97
PTCD3-218ENST00000493430 EIF3BP55884 814 aaKnown RBP2.77□□□□□ -1.97
PTCD3-218ENST00000493430 GEMIN4P57678 1058 aaKnown RBP2.77□□□□□ -1.97
PTCD3-218ENST00000493430 TAS2R40P59535 323 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 YWHAEP62258 255 aaKnown RBP2.77□□□□□ -1.97
PTCD3-218ENST00000493430 SNRPD1P62314 119 aaKnown RBP2.77□□□□□ -1.97
PTCD3-218ENST00000493430 PPARDQ03181 441 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 UBXN1Q04323 297 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 GFPT1Q06210 699 aaPredicted RBP2.77□□□□□ -1.97
PTCD3-218ENST00000493430 CDC16Q13042 620 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 IRF4Q15306 451 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 STX1AQ16623 288 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 PNLIPRP3Q17RR3 467 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 DEFB133Q30KQ1 61 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 HNRNPA1L2Q32P51 320 aaKnown RBP2.77□□□□□ -1.97
PTCD3-218ENST00000493430 CXorf66Q5JRM2 361 aaPredicted RBP2.77□□□□□ -1.97
PTCD3-218ENST00000493430 FAM69AQ5T7M9 428 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 INTS11Q5TA45 600 aaKnown RBP2.77□□□□□ -1.97
PTCD3-218ENST00000493430 ALS2CLQ60I27 953 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 ZNF613Q6PF04 617 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 BHLHB9Q6PI77 547 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 RBM43Q6ZSC3 357 aaKnown RBP2.77□□□□□ -1.97
PTCD3-218ENST00000493430 ZNF571Q7Z3V5 609 aaPredicted RBP2.77□□□□□ -1.97
PTCD3-218ENST00000493430 PTAR1Q7Z6K3 402 aaPredicted RBP2.77□□□□□ -1.97
PTCD3-218ENST00000493430 TMEM110Q86TL2 294 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 TSPAN33Q86UF1 283 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 ERICH1Q86X53 443 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 PM20D2Q8IYS1 436 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 SLC25A45Q8N413 288 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 SLC5A8Q8N695 610 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 ZNF611Q8N823 705 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 BMPERQ8N8U9 685 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 ATP6V0D2Q8N8Y2 350 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 NAXEQ8NCW5 288 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 OR2A12Q8NGT7 310 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 CCL4L1Q8NHW4 92 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 FIBINQ8TAL6 211 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 FAM172AQ8WUF8 416 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 IRGQQ8WZA9 623 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 TSACCQ96A04 125 aaPredicted RBP2.77□□□□□ -1.97
PTCD3-218ENST00000493430 OTUB2Q96DC9 234 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 PDXPQ96GD0 296 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 SERAC1Q96JX3 654 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 C18orf12Q96KH6 178 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 PPM1MQ96MI6 270 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 SERPINB11Q96P15 392 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 SMC6Q96SB8 1091 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 LGMNQ99538 433 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 NRTNQ99748 197 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 OMDQ99983 421 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 SLX1AQ9BQ83 275 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 FEM1AQ9BSK4 669 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 SNRNP25Q9BV90 132 aaKnown RBP2.77□□□□□ -1.97
PTCD3-218ENST00000493430 NUSAP1Q9BXS6 441 aaKnown RBP2.77□□□□□ -1.97
PTCD3-218ENST00000493430 ABCG8Q9H221 673 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 THAP9Q9H5L6 903 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 DHX35Q9H5Z1 703 aaKnown RBP2.77□□□□□ -1.97
PTCD3-218ENST00000493430 MAGIXQ9H6Y5 334 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 C10orf88Q9H8K7 445 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 ZWILCHQ9H900 591 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 OLA1Q9NTK5 396 aaKnown RBP2.77□□□□□ -1.97
PTCD3-218ENST00000493430 COMMD8Q9NX08 183 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 ARHGEF38Q9NXL2 777 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.77□□□□□ -1.97
PTCD3-218ENST00000493430 EHD2Q9NZN4 543 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 TMEM181Q9P2C4 612 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 PDP2Q9P2J9 529 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 NOL12Q9UGY1 213 aaKnown RBP eCLIP2.77□□□□□ -1.97
PTCD3-218ENST00000493430 CD84Q9UIB8 345 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 STOML2Q9UJZ1 356 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 PCDHGA5Q9Y5G8 931 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 MAU2Q9Y6X3 613 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 U3KQA8 63 aa2.77□□□□□ -1.97
PTCD3-218ENST00000493430 GCN1Q92616 2671 aaKnown RBP2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms