RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 DCUN1D3Q8IWE4 304 aa6.65□□□□□ -1.35
HERC4-211ENST00000492996 LAS2Q8IYD9 372 aa6.65□□□□□ -1.35
HERC4-211ENST00000492996 TSTD1Q8NFU3 115 aa6.65□□□□□ -1.35
HERC4-211ENST00000492996 JPH3Q8WXH2 748 aaPredicted RBP6.65□□□□□ -1.35
HERC4-211ENST00000492996 RDH12Q96NR8 316 aa6.65□□□□□ -1.35
HERC4-211ENST00000492996 AIFM2Q9BRQ8 373 aa6.65□□□□□ -1.35
HERC4-211ENST00000492996 YTHDF1Q9BYJ9 559 aaKnown RBP6.65□□□□□ -1.35
HERC4-211ENST00000492996 DPEP2Q9H4A9 486 aa6.65□□□□□ -1.35
HERC4-211ENST00000492996 ZNF282Q9UDV7 671 aaPredicted RBP6.65□□□□□ -1.35
HERC4-211ENST00000492996 GPR34Q9UPC5 381 aa6.65□□□□□ -1.35
HERC4-211ENST00000492996 ERGIC3Q9Y282 383 aa6.65□□□□□ -1.35
HERC4-211ENST00000492996 C17orf113A0A1B0GUU1 675 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 LNP1A1A4G5 178 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 OR52A4PA6NMU1 304 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 J3KTA2 159 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 RNASET2O00584 256 aaKnown RBP6.64□□□□□ -1.35
HERC4-211ENST00000492996 TOX3O15405 576 aaPredicted RBP6.64□□□□□ -1.35
HERC4-211ENST00000492996 ASNA1O43681 348 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 OR1F1O43749 312 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 KLHL18O94889 574 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 DBTP11182 482 aaKnown RBP6.64□□□□□ -1.35
HERC4-211ENST00000492996 POU2F1P14859 743 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 MAP2K4P45985 399 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 HNRNPFP52597 415 aaKnown RBP6.64□□□□□ -1.35
HERC4-211ENST00000492996 MVDP53602 400 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 CDH12P55289 794 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 LSM3P62310 102 aaKnown RBP6.64□□□□□ -1.35
HERC4-211ENST00000492996 LRRC74AQ0VAA2 488 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 HSPB3Q12988 150 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 SCARB2Q14108 478 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 RBM48Q5RL73 367 aaKnown RBP6.64□□□□□ -1.35
HERC4-211ENST00000492996 PXDC1Q5TGL8 231 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 ZNF691Q5VV52 312 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 RSBN1Q5VWQ0 802 aaPredicted RBP6.64□□□□□ -1.35
HERC4-211ENST00000492996 UNQ6494/PRO21346Q6UXR6 183 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 AKAP14Q86UN6 197 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 CCDC28AQ8IWP9 274 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 METTL4Q8N3J2 472 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 LINC00469Q8N7U9 141 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 ANKRD53Q8N9V6 530 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 FBXO15Q8NCQ5 510 aaPredicted RBP6.64□□□□□ -1.35
HERC4-211ENST00000492996 GIMAP1Q8WWP7 306 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 RAB8BQ92930 207 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 UCN3Q969E3 161 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 EXOSC8Q96B26 276 aaKnown RBP6.64□□□□□ -1.35
HERC4-211ENST00000492996 OTUB1Q96FW1 271 aaPredicted RBP6.64□□□□□ -1.35
HERC4-211ENST00000492996 ZNF486Q96H40 463 aaPredicted RBP6.64□□□□□ -1.35
HERC4-211ENST00000492996 C12orf66Q96MD2 445 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 KCNC2Q96PR1 638 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 NODALQ96S42 347 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 WDR70Q9NW82 654 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 ERVK-18Q9QC07 812 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 RHCGQ9UBD6 479 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 SNX11Q9Y5W9 270 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 SCN3AQ9NY46 2000 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 PDZK1P1A8MUH7 402 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 ERVH48-1M5A8F1 160 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 FOXE1O00358 373 aaPredicted RBP6.64□□□□□ -1.35
HERC4-211ENST00000492996 PLPP1O14494 284 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 TERTO14746 1132 aaKnown RBP6.64□□□□□ -1.35
HERC4-211ENST00000492996 SLC31A1O15431 190 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 ALDH4A1P30038 563 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 MAPK12P53778 367 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 KCNJ10P78508 379 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 VEZF1Q14119 521 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 KRT33BQ14525 404 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 GANABQ14697 944 aaKnown RBP6.64□□□□□ -1.35
HERC4-211ENST00000492996 GCNT6Q5T4J0 391 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 FAM46CQ5VWP2 391 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 FAM71E1Q6IPT2 247 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 MED25Q71SY5 747 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 GPR155Q7Z3F1 870 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 FAM124AQ86V42 546 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 KRT78Q8N1N4 520 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 AMER3Q8N944 861 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 AVL9Q8NBF6 648 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 PSD4Q8NDX1 1056 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 OR14C36Q8NHC7 312 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.64□□□□□ -1.35
HERC4-211ENST00000492996 TTC9Q92623 222 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 NRBF2Q96F24 287 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 MAGED4Q96JG8 741 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 C7orf34Q96L11 122 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 FCRL4Q96PJ5 515 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 BHLHE41Q9C0J9 482 aaPredicted RBP6.64□□□□□ -1.35
HERC4-211ENST00000492996 WDR26Q9H7D7 661 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 SP140LQ9H930 580 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 TAS2R9Q9NYW1 312 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 COQ3Q9NZJ6 369 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 KLHL20Q9Y2M5 609 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 PCDHGB7Q9Y5F8 929 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 KLK4Q9Y5K2 254 aa6.64□□□□□ -1.35
HERC4-211ENST00000492996 SNRNP200O75643 2136 aaKnown RBP6.64□□□□□ -1.35
HERC4-211ENST00000492996 MN1Q10571 1320 aaPredicted RBP6.63□□□□□ -1.35
HERC4-211ENST00000492996 GLOD5A6NK44 160 aa6.63□□□□□ -1.35
HERC4-211ENST00000492996 M0R129 80 aa6.63□□□□□ -1.35
HERC4-211ENST00000492996 TBX6O95947 436 aaPredicted RBP6.63□□□□□ -1.35
HERC4-211ENST00000492996 VIPP01282 170 aa6.63□□□□□ -1.35
HERC4-211ENST00000492996 ALPPL2P10696 532 aa6.63□□□□□ -1.35
HERC4-211ENST00000492996 IL1RNP18510 177 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms