RNA–Protein interactions for RNA: ENST00000492539.5

NELFE-212, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-212ENST00000492539 HSD17B3P37058 310 aa18.3■□□□□ 0.52
NELFE-212ENST00000492539 KCNJ2P63252 427 aa18.3■□□□□ 0.52
NELFE-212ENST00000492539 IRF9Q00978 393 aa18.3■□□□□ 0.52
NELFE-212ENST00000492539 TNFRSF17Q02223 184 aa18.3■□□□□ 0.52
NELFE-212ENST00000492539 SPRED3Q2MJR0 410 aa18.3■□□□□ 0.52
NELFE-212ENST00000492539 C18orf63Q68DL7 685 aa18.3■□□□□ 0.52
NELFE-212ENST00000492539 GRHL2Q6ISB3 625 aa18.3■□□□□ 0.52
NELFE-212ENST00000492539 WDR53Q7Z5U6 358 aaPredicted RBP18.3■□□□□ 0.52
NELFE-212ENST00000492539 ISCA2Q86U28 154 aa18.3■□□□□ 0.52
NELFE-212ENST00000492539 ZZZ3Q8IYH5 903 aa18.3■□□□□ 0.52
NELFE-212ENST00000492539 ULK2Q8IYT8 1036 aa18.3■□□□□ 0.52
NELFE-212ENST00000492539 ST13P4Q8IZP2 240 aaPredicted RBP18.3■□□□□ 0.52
NELFE-212ENST00000492539 CENPLQ8N0S6 344 aaPredicted RBP18.3■□□□□ 0.52
NELFE-212ENST00000492539 ZCCHC7Q8N3Z6 543 aaKnown RBP18.3■□□□□ 0.52
NELFE-212ENST00000492539 NEIL3Q8TAT5 605 aa18.3■□□□□ 0.52
NELFE-212ENST00000492539 STAG3L4Q8TBR4 150 aa18.3■□□□□ 0.52
NELFE-212ENST00000492539 MTBPQ96DY7 904 aa18.3■□□□□ 0.52
NELFE-212ENST00000492539 ATOH8Q96SQ7 321 aa18.3■□□□□ 0.52
NELFE-212ENST00000492539 ALG9Q9H6U8 611 aa18.3■□□□□ 0.52
NELFE-212ENST00000492539 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.3■□□□□ 0.52
NELFE-212ENST00000492539 ALKBH4Q9NXW9 302 aa18.3■□□□□ 0.52
NELFE-212ENST00000492539 CNIH4Q9P003 139 aa18.3■□□□□ 0.52
NELFE-212ENST00000492539 PSMC3IPQ9P2W1 217 aaPredicted RBP18.3■□□□□ 0.52
NELFE-212ENST00000492539 ADGRE2Q9UHX3 823 aa18.3■□□□□ 0.52
NELFE-212ENST00000492539 PHF11Q9UIL8 331 aa18.3■□□□□ 0.52
NELFE-212ENST00000492539 CNOT11Q9UKZ1 510 aaKnown RBP18.3■□□□□ 0.52
NELFE-212ENST00000492539 NIPBLQ6KC79 2804 aaeCLIP18.29■□□□□ 0.52
NELFE-212ENST00000492539 CCDC189A1A4V9 331 aa18.29■□□□□ 0.52
NELFE-212ENST00000492539 K7EPI3 171 aa18.29■□□□□ 0.52
NELFE-212ENST00000492539 PLPP1O14494 284 aa18.29■□□□□ 0.52
NELFE-212ENST00000492539 KLHL2O95198 593 aa18.29■□□□□ 0.52
NELFE-212ENST00000492539 SHBGP04278 402 aa18.29■□□□□ 0.52
NELFE-212ENST00000492539 PEX19P40855 299 aa18.29■□□□□ 0.52
NELFE-212ENST00000492539 ARFIP1P53367 373 aa18.29■□□□□ 0.52
NELFE-212ENST00000492539 HNRNPH2P55795 449 aaKnown RBP18.29■□□□□ 0.52
NELFE-212ENST00000492539 FAM83EQ2M2I3 478 aa18.29■□□□□ 0.52
NELFE-212ENST00000492539 TIFABQ6ZNK6 161 aa18.29■□□□□ 0.52
NELFE-212ENST00000492539 GPR180Q86V85 440 aa18.29■□□□□ 0.52
NELFE-212ENST00000492539 RNF175Q8N4F7 328 aa18.29■□□□□ 0.52
NELFE-212ENST00000492539 OR10G3Q8NGC4 313 aa18.29■□□□□ 0.52
NELFE-212ENST00000492539 KCTD4Q8WVF5 259 aa18.29■□□□□ 0.52
NELFE-212ENST00000492539 RGMAQ96B86 450 aa18.29■□□□□ 0.52
NELFE-212ENST00000492539 NXNL1Q96CM4 212 aa18.29■□□□□ 0.52
NELFE-212ENST00000492539 POLDIP3Q9BY77 421 aaKnown RBP18.29■□□□□ 0.52
NELFE-212ENST00000492539 VPS11Q9H270 941 aa18.29■□□□□ 0.52
NELFE-212ENST00000492539 SLC6A15Q9H2J7 730 aa18.29■□□□□ 0.52
NELFE-212ENST00000492539 CCM2LQ9NUG4 571 aaPredicted RBP18.29■□□□□ 0.52
NELFE-212ENST00000492539 OPTCQ9UBM4 332 aa18.29■□□□□ 0.52
NELFE-212ENST00000492539 ST6GALNAC2Q9UJ37 374 aa18.29■□□□□ 0.52
NELFE-212ENST00000492539 TSC22D4Q9Y3Q8 395 aa18.29■□□□□ 0.52
NELFE-212ENST00000492539 ABCA4P78363 2273 aa18.29■□□□□ 0.52
NELFE-212ENST00000492539 IQANK1A0A1B0GTG1 560 aa18.28■□□□□ 0.52
NELFE-212ENST00000492539 HSPB2A8KAH6 182 aa18.28■□□□□ 0.52
NELFE-212ENST00000492539 SYT5O00445 386 aa18.28■□□□□ 0.52
NELFE-212ENST00000492539 KERAO60938 352 aa18.28■□□□□ 0.52
NELFE-212ENST00000492539 PRKRAO75569 313 aaKnown RBP18.28■□□□□ 0.52
NELFE-212ENST00000492539 PIK3CBP42338 1070 aa18.28■□□□□ 0.52
NELFE-212ENST00000492539 KIR2DL3P43628 341 aa18.28■□□□□ 0.52
NELFE-212ENST00000492539 SLC37A1P57057 533 aa18.28■□□□□ 0.52
NELFE-212ENST00000492539 HERVK_113P63132 956 aa18.28■□□□□ 0.52
NELFE-212ENST00000492539 ERVK-8P63133 956 aa18.28■□□□□ 0.52
NELFE-212ENST00000492539 SNTB1Q13884 538 aaKnown RBP18.28■□□□□ 0.52
NELFE-212ENST00000492539 EBPQ15125 230 aaKnown RBP18.28■□□□□ 0.52
NELFE-212ENST00000492539 HSPB2Q16082 182 aa18.28■□□□□ 0.52
NELFE-212ENST00000492539 NTRK2Q16620 822 aa18.28■□□□□ 0.52
NELFE-212ENST00000492539 SLC29A4Q7RTT9 530 aa18.28■□□□□ 0.52
NELFE-212ENST00000492539 TGIF2LYQ8IUE0 185 aa18.28■□□□□ 0.52
NELFE-212ENST00000492539 RELL2Q8NC24 303 aaPredicted RBP18.28■□□□□ 0.52
NELFE-212ENST00000492539 HUS1BQ8NHY5 278 aa18.28■□□□□ 0.52
NELFE-212ENST00000492539 SH3GL2Q99962 352 aa18.28■□□□□ 0.52
NELFE-212ENST00000492539 GPATCH1Q9BRR8 931 aaKnown RBP18.28■□□□□ 0.52
NELFE-212ENST00000492539 PELOQ9BRX2 385 aaKnown RBP18.28■□□□□ 0.52
NELFE-212ENST00000492539 ERVK-6Q9BXR3 956 aa18.28■□□□□ 0.52
NELFE-212ENST00000492539 ZNF717Q9BY31 904 aaPredicted RBP18.28■□□□□ 0.52
NELFE-212ENST00000492539 WWTR1Q9GZV5 400 aa18.28■□□□□ 0.52
NELFE-212ENST00000492539 LIME1Q9H400 295 aa18.28■□□□□ 0.52
NELFE-212ENST00000492539 PRM3Q9NNZ6 103 aa18.28■□□□□ 0.52
NELFE-212ENST00000492539 DMRT3Q9NQL9 472 aa18.28■□□□□ 0.52
NELFE-212ENST00000492539 RASSF1Q9NS23 344 aa18.28■□□□□ 0.52
NELFE-212ENST00000492539 CRIM1Q9NZV1 1036 aa18.28■□□□□ 0.52
NELFE-212ENST00000492539 ERVK-19Q9WJR5 959 aa18.28■□□□□ 0.52
NELFE-212ENST00000492539 ACANP16112 2415 aa18.28■□□□□ 0.52
NELFE-212ENST00000492539 UBXN8O00124 270 aa18.27■□□□□ 0.52
NELFE-212ENST00000492539 PROM1O43490 865 aa18.27■□□□□ 0.52
NELFE-212ENST00000492539 CLPSP04118 112 aa18.27■□□□□ 0.52
NELFE-212ENST00000492539 NUDT17P0C025 328 aa18.27■□□□□ 0.52
NELFE-212ENST00000492539 SERPINB3P29508 390 aa18.27■□□□□ 0.52
NELFE-212ENST00000492539 BUD31P41223 144 aaPredicted RBP18.27■□□□□ 0.52
NELFE-212ENST00000492539 RAP1GDS1P52306 607 aa18.27■□□□□ 0.52
NELFE-212ENST00000492539 ACAP2Q15057 778 aa18.27■□□□□ 0.52
NELFE-212ENST00000492539 MRM1Q6IN84 353 aaKnown RBP18.27■□□□□ 0.52
NELFE-212ENST00000492539 KLC3Q6P597 504 aa18.27■□□□□ 0.52
NELFE-212ENST00000492539 RNF111Q6ZNA4 994 aa18.27■□□□□ 0.52
NELFE-212ENST00000492539 TDRPQ86YL5 185 aa18.27■□□□□ 0.52
NELFE-212ENST00000492539 MREGQ8N565 214 aa18.27■□□□□ 0.52
NELFE-212ENST00000492539 NAXEQ8NCW5 288 aa18.27■□□□□ 0.52
NELFE-212ENST00000492539 FAM13CQ8NE31 585 aa18.27■□□□□ 0.52
NELFE-212ENST00000492539 CHDHQ8NE62 594 aaPredicted RBP18.27■□□□□ 0.52
NELFE-212ENST00000492539 RHEBL1Q8TAI7 183 aa18.27■□□□□ 0.52
NELFE-212ENST00000492539 DOK4Q8TEW6 326 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms