RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 RBM18Q96H35 190 aaKnown RBP13.24□□□□□ -0.29
SSR4-212ENST00000491833 RBM24Q9BX46 236 aaKnown RBP13.24□□□□□ -0.29
SSR4-212ENST00000491833 MS4A8Q9BY19 250 aa13.24□□□□□ -0.29
SSR4-212ENST00000491833 WWTR1Q9GZV5 400 aa13.24□□□□□ -0.29
SSR4-212ENST00000491833 CNOT10Q9H9A5 744 aaKnown RBP13.24□□□□□ -0.29
SSR4-212ENST00000491833 NSMCE4AQ9NXX6 385 aa13.24□□□□□ -0.29
SSR4-212ENST00000491833 ZNF490Q9ULM2 529 aaPredicted RBP13.24□□□□□ -0.29
SSR4-212ENST00000491833 EIF3LQ9Y262 564 aaKnown RBP13.24□□□□□ -0.29
SSR4-212ENST00000491833 IQANK1A0A1B0GTG1 560 aa13.23□□□□□ -0.29
SSR4-212ENST00000491833 ANKRD33BA6NCL7 494 aa13.23□□□□□ -0.29
SSR4-212ENST00000491833 HRKO00198 91 aa13.23□□□□□ -0.29
SSR4-212ENST00000491833 SMPD2O60906 423 aa13.23□□□□□ -0.29
SSR4-212ENST00000491833 GSTA2P09210 222 aa13.23□□□□□ -0.29
SSR4-212ENST00000491833 TMIGD3P0DMS9 266 aaPredicted RBP13.23□□□□□ -0.29
SSR4-212ENST00000491833 ALOX15P16050 662 aaPredicted RBP13.23□□□□□ -0.29
SSR4-212ENST00000491833 CD22P20273 847 aa13.23□□□□□ -0.29
SSR4-212ENST00000491833 MASP1P48740 699 aa13.23□□□□□ -0.29
SSR4-212ENST00000491833 CDK9P50750 372 aaKnown RBP13.23□□□□□ -0.29
SSR4-212ENST00000491833 HERVK_113P63132 956 aa13.23□□□□□ -0.29
SSR4-212ENST00000491833 ERVK-8P63133 956 aa13.23□□□□□ -0.29
SSR4-212ENST00000491833 MGAT5Q09328 741 aa13.23□□□□□ -0.29
SSR4-212ENST00000491833 BIKQ13323 160 aa13.23□□□□□ -0.29
SSR4-212ENST00000491833 LAPTM5Q13571 262 aa13.23□□□□□ -0.29
SSR4-212ENST00000491833 DOC2AQ14183 400 aa13.23□□□□□ -0.29
SSR4-212ENST00000491833 SLMAPQ14BN4 828 aa13.23□□□□□ -0.29
SSR4-212ENST00000491833 EBPQ15125 230 aaKnown RBP13.23□□□□□ -0.29
SSR4-212ENST00000491833 PDK4Q16654 411 aa13.23□□□□□ -0.29
SSR4-212ENST00000491833 HIST2H2ACQ16777 129 aaPredicted RBP13.23□□□□□ -0.29
SSR4-212ENST00000491833 SPRED3Q2MJR0 410 aa13.23□□□□□ -0.29
SSR4-212ENST00000491833 AP5B1Q2VPB7 878 aa13.23□□□□□ -0.29
SSR4-212ENST00000491833 NHSL2Q5HYW2 709 aa13.23□□□□□ -0.29
SSR4-212ENST00000491833 STEAP4Q687X5 459 aa13.23□□□□□ -0.29
SSR4-212ENST00000491833 HIST2H2AA3Q6FI13 130 aa13.23□□□□□ -0.29
SSR4-212ENST00000491833 DGAT2L6Q6ZPD8 337 aa13.23□□□□□ -0.29
SSR4-212ENST00000491833 UBE3DQ7Z6J8 389 aa13.23□□□□□ -0.29
SSR4-212ENST00000491833 TAGAPQ8N103 731 aa13.23□□□□□ -0.29
SSR4-212ENST00000491833 SPATA3Q8NHX4 192 aa13.23□□□□□ -0.29
SSR4-212ENST00000491833 PPWD1Q96BP3 646 aaKnown RBP13.23□□□□□ -0.29
SSR4-212ENST00000491833 WDR34Q96EX3 536 aa13.23□□□□□ -0.29
SSR4-212ENST00000491833 Q96MF0 132 aa13.23□□□□□ -0.29
SSR4-212ENST00000491833 RILPQ96NA2 401 aa13.23□□□□□ -0.29
SSR4-212ENST00000491833 PIP5K1AQ99755 562 aa13.23□□□□□ -0.29
SSR4-212ENST00000491833 PELOQ9BRX2 385 aaKnown RBP13.23□□□□□ -0.29
SSR4-212ENST00000491833 ERVK-6Q9BXR3 956 aa13.23□□□□□ -0.29
SSR4-212ENST00000491833 UGT2B28Q9BY64 529 aa13.23□□□□□ -0.29
SSR4-212ENST00000491833 UBQLN3Q9H347 655 aa13.23□□□□□ -0.29
SSR4-212ENST00000491833 RPF2Q9H7B2 306 aaKnown RBP13.23□□□□□ -0.29
SSR4-212ENST00000491833 PLAC1Q9HBJ0 212 aa13.23□□□□□ -0.29
SSR4-212ENST00000491833 ZDHHC18Q9NUE0 388 aa13.23□□□□□ -0.29
SSR4-212ENST00000491833 GALNT8Q9NY28 637 aa13.23□□□□□ -0.29
SSR4-212ENST00000491833 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.23□□□□□ -0.29
SSR4-212ENST00000491833 ERVK-19Q9WJR5 959 aa13.23□□□□□ -0.29
SSR4-212ENST00000491833 C15orf41Q9Y2V0 281 aa13.23□□□□□ -0.29
SSR4-212ENST00000491833 SLC6A5Q9Y345 797 aa13.23□□□□□ -0.29
SSR4-212ENST00000491833 IKBKGQ9Y6K9 419 aa13.23□□□□□ -0.29
SSR4-212ENST00000491833 V9GYY5 206 aaPredicted RBP13.23□□□□□ -0.29
SSR4-212ENST00000491833 MPDZO75970 2070 aa13.23□□□□□ -0.29
SSR4-212ENST00000491833 OR6C76A6NM76 312 aa13.22□□□□□ -0.29
SSR4-212ENST00000491833 CAPN14A8MX76 684 aa13.22□□□□□ -0.29
SSR4-212ENST00000491833 CASKO14936 926 aa13.22□□□□□ -0.29
SSR4-212ENST00000491833 PRAMEF4O60810 478 aa13.22□□□□□ -0.29
SSR4-212ENST00000491833 HSPA7P48741 367 aa13.22□□□□□ -0.29
SSR4-212ENST00000491833 TMED10P49755 219 aaKnown RBP13.22□□□□□ -0.29
SSR4-212ENST00000491833 TNFRSF17Q02223 184 aa13.22□□□□□ -0.29
SSR4-212ENST00000491833 TOMM20Q15388 145 aa13.22□□□□□ -0.29
SSR4-212ENST00000491833 TMEM35AQ53FP2 167 aa13.22□□□□□ -0.29
SSR4-212ENST00000491833 FBXO48Q5FWF7 155 aa13.22□□□□□ -0.29
SSR4-212ENST00000491833 DCST1Q5T197 706 aa13.22□□□□□ -0.29
SSR4-212ENST00000491833 PRAMEF9Q5VWM5 478 aa13.22□□□□□ -0.29
SSR4-212ENST00000491833 TRMT10BQ6PF06 316 aaKnown RBP13.22□□□□□ -0.29
SSR4-212ENST00000491833 LUZP2Q86TE4 346 aa13.22□□□□□ -0.29
SSR4-212ENST00000491833 IGDCC3Q8IVU1 814 aa13.22□□□□□ -0.29
SSR4-212ENST00000491833 CTAGE3PQ8IX95 158 aa13.22□□□□□ -0.29
SSR4-212ENST00000491833 GSPT2Q8IYD1 628 aaKnown RBP13.22□□□□□ -0.29
SSR4-212ENST00000491833 ST13P4Q8IZP2 240 aaPredicted RBP13.22□□□□□ -0.29
SSR4-212ENST00000491833 CIARTQ8N365 385 aaPredicted RBP13.22□□□□□ -0.29
SSR4-212ENST00000491833 C9orf106Q8NAJ2 232 aa13.22□□□□□ -0.29
SSR4-212ENST00000491833 ZNF473Q8WTR7 871 aaKnown RBP13.22□□□□□ -0.29
SSR4-212ENST00000491833 ANKRD49Q8WVL7 239 aa13.22□□□□□ -0.29
SSR4-212ENST00000491833 PIGTQ969N2 578 aa13.22□□□□□ -0.29
SSR4-212ENST00000491833 NTNG2Q96CW9 530 aa13.22□□□□□ -0.29
SSR4-212ENST00000491833 WDYHV1Q96HA8 205 aa13.22□□□□□ -0.29
SSR4-212ENST00000491833 VPS39Q96JC1 886 aa13.22□□□□□ -0.29
SSR4-212ENST00000491833 ZFP3Q96NJ6 502 aa13.22□□□□□ -0.29
SSR4-212ENST00000491833 BDH2Q9BUT1 245 aa13.22□□□□□ -0.29
SSR4-212ENST00000491833 SFXN3Q9BWM7 321 aa13.22□□□□□ -0.29
SSR4-212ENST00000491833 CALHM2Q9HA72 323 aa13.22□□□□□ -0.29
SSR4-212ENST00000491833 POPDC3Q9HBV1 291 aa13.22□□□□□ -0.29
SSR4-212ENST00000491833 MS4A12Q9NXJ0 267 aa13.22□□□□□ -0.29
SSR4-212ENST00000491833 DOCK7Q96N67 2140 aa13.21□□□□□ -0.29
SSR4-212ENST00000491833 SMAD7O15105 426 aaKnown RBP13.21□□□□□ -0.29
SSR4-212ENST00000491833 TP73O15350 636 aa13.21□□□□□ -0.29
SSR4-212ENST00000491833 TAPBPO15533 448 aa13.21□□□□□ -0.29
SSR4-212ENST00000491833 OR10H2O60403 315 aa13.21□□□□□ -0.29
SSR4-212ENST00000491833 SH3BGRLO75368 114 aa13.21□□□□□ -0.29
SSR4-212ENST00000491833 STK16O75716 305 aa13.21□□□□□ -0.29
SSR4-212ENST00000491833 SNX4O95219 450 aa13.21□□□□□ -0.29
SSR4-212ENST00000491833 ACSL3O95573 720 aa13.21□□□□□ -0.29
SSR4-212ENST00000491833 BMP7P18075 431 aa13.21□□□□□ -0.29
SSR4-212ENST00000491833 SSTR1P30872 391 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms